RNA–Protein interactions for RNA: ENST00000217260.8

RSPO4-201, Transcript of R-spondin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RSPO4, Length 2,707 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4-201ENST00000217260 EMP1P54849 157 aa13.67□□□□□ -0.22
RSPO4-201ENST00000217260 RPL32P62910 135 aaKnown RBP13.67□□□□□ -0.22
RSPO4-201ENST00000217260 TP53TG1Q9Y2A0 90 aa13.67□□□□□ -0.22
RSPO4-201ENST00000217260 SLC25A20O43772 301 aa13.66□□□□□ -0.22
RSPO4-201ENST00000217260 CRYGDP07320 174 aa13.66□□□□□ -0.22
RSPO4-201ENST00000217260 TRAV12-2A0A075B6T6 113 aa13.65□□□□□ -0.22
RSPO4-201ENST00000217260 CITED1Q99966 193 aa13.65□□□□□ -0.22
RSPO4-201ENST00000217260 USP9XQ93008 2570 aaPredicted RBP13.65□□□□□ -0.22
RSPO4-201ENST00000217260 VCYO14598 125 aa13.65□□□□□ -0.22
RSPO4-201ENST00000217260 TSHBP01222 138 aa13.65□□□□□ -0.22
RSPO4-201ENST00000217260 SNRPD3P62318 126 aaKnown RBP13.65□□□□□ -0.22
RSPO4-201ENST00000217260 FAM74A4Q5TZK3 123 aa13.65□□□□□ -0.22
RSPO4-201ENST00000217260 A0A0J9YX75 114 aa13.64□□□□□ -0.23
RSPO4-201ENST00000217260 C9JAW5 83 aa13.64□□□□□ -0.23
RSPO4-201ENST00000217260 GAGE2BQ13066 116 aa13.64□□□□□ -0.23
RSPO4-201ENST00000217260 GAGE2EQ4V326 116 aa13.64□□□□□ -0.23
RSPO4-201ENST00000217260 SLC25A29Q8N8R3 303 aa13.64□□□□□ -0.23
RSPO4-201ENST00000217260 GAGE2DQ9UEU5 116 aa13.64□□□□□ -0.23
RSPO4-201ENST00000217260 IGIPA6NJ69 53 aa13.64□□□□□ -0.23
RSPO4-201ENST00000217260 SNCGO76070 127 aa13.64□□□□□ -0.23
RSPO4-201ENST00000217260 RPL39P62891 51 aaKnown RBP13.64□□□□□ -0.23
RSPO4-201ENST00000217260 MDFICQ9P1T7 246 aa13.64□□□□□ -0.23
RSPO4-201ENST00000217260 IGLV4-69A0A075B6H9 119 aa13.63□□□□□ -0.23
RSPO4-201ENST00000217260 SDHAF1A6NFY7 115 aa13.63□□□□□ -0.23
RSPO4-201ENST00000217260 ODF3Q96PU9 254 aa13.63□□□□□ -0.23
RSPO4-201ENST00000217260 IGHV3-16A0A0C4DH30 117 aa13.63□□□□□ -0.23
RSPO4-201ENST00000217260 DSCR9P59020 149 aa13.63□□□□□ -0.23
RSPO4-201ENST00000217260 TMEM170BQ5T4T1 132 aa13.63□□□□□ -0.23
RSPO4-201ENST00000217260 RHODO00212 210 aa13.63□□□□□ -0.23
RSPO4-201ENST00000217260 RAX2Q96IS3 184 aa13.63□□□□□ -0.23
RSPO4-201ENST00000217260 C9orf85Q96MD7 179 aa13.63□□□□□ -0.23
RSPO4-201ENST00000217260 PMVKQ15126 192 aa13.62□□□□□ -0.23
RSPO4-201ENST00000217260 LINC01356Q8N9X3 169 aa13.62□□□□□ -0.23
RSPO4-201ENST00000217260 CSMD2Q7Z408 3487 aa13.62□□□□□ -0.23
RSPO4-201ENST00000217260 K7EQG2 157 aa13.62□□□□□ -0.23
RSPO4-201ENST00000217260 LGALS9O00182 355 aa13.62□□□□□ -0.23
RSPO4-201ENST00000217260 NHLRC4P0CG21 123 aaPredicted RBP13.62□□□□□ -0.23
RSPO4-201ENST00000217260 SYNJ2BPP57105 145 aa13.62□□□□□ -0.23
RSPO4-201ENST00000217260 Q8N1Y9 231 aa13.62□□□□□ -0.23
RSPO4-201ENST00000217260 DOPEY2Q9Y3R5 2298 aa13.61□□□□□ -0.23
RSPO4-201ENST00000217260 TMEM89A2RUT3 159 aa13.61□□□□□ -0.23
RSPO4-201ENST00000217260 SPINK13Q1W4C9 94 aa13.61□□□□□ -0.23
RSPO4-201ENST00000217260 UTP20O75691 2785 aaKnown RBP13.61□□□□□ -0.23
RSPO4-201ENST00000217260 TRBV27A0A0K0K1C4 114 aa13.61□□□□□ -0.23
RSPO4-201ENST00000217260 M0QXV9 152 aa13.6□□□□□ -0.23
RSPO4-201ENST00000217260 NDUFV3P56181 108 aaKnown RBP13.6□□□□□ -0.23
RSPO4-201ENST00000217260 TSPEAR-AS2P59090 65 aa13.6□□□□□ -0.23
RSPO4-201ENST00000217260 TRPT1Q86TN4 253 aaKnown RBP13.6□□□□□ -0.23
RSPO4-201ENST00000217260 PIEZO1Q92508 2521 aa13.6□□□□□ -0.23
RSPO4-201ENST00000217260 TMEM141Q96I45 108 aa13.6□□□□□ -0.23
RSPO4-201ENST00000217260 ZNF56Q15929 161 aa13.6□□□□□ -0.23
RSPO4-201ENST00000217260 TTC32Q5I0X7 151 aa13.6□□□□□ -0.23
RSPO4-201ENST00000217260 ZNF256Q9Y2P7 627 aaPredicted RBP13.6□□□□□ -0.23
RSPO4-201ENST00000217260 SORL1Q92673 2214 aa13.6□□□□□ -0.23
RSPO4-201ENST00000217260 TRBV6-5A0A0K0K1A5 114 aa13.59□□□□□ -0.23
RSPO4-201ENST00000217260 LGALS3P17931 250 aaKnown RBP13.59□□□□□ -0.23
RSPO4-201ENST00000217260 MAPK1IP1LQ8NDC0 245 aa13.59□□□□□ -0.23
RSPO4-201ENST00000217260 DUX5Q96PT3 197 aa13.59□□□□□ -0.23
RSPO4-201ENST00000217260 TIMM17AQ99595 171 aa13.59□□□□□ -0.23
RSPO4-201ENST00000217260 IGHV1OR15-1A0A075B7D0 117 aa13.59□□□□□ -0.23
RSPO4-201ENST00000217260 IGSF10Q6WRI0 2623 aa13.59□□□□□ -0.23
RSPO4-201ENST00000217260 A4D1N5 150 aa13.58□□□□□ -0.24
RSPO4-201ENST00000217260 H7C2G1 150 aa13.58□□□□□ -0.24
RSPO4-201ENST00000217260 J3QQQ9 107 aa13.58□□□□□ -0.24
RSPO4-201ENST00000217260 USP9YO00507 2555 aaPredicted RBP13.58□□□□□ -0.24
RSPO4-201ENST00000217260 TRAV4A0A0B4J268 109 aa13.58□□□□□ -0.24
RSPO4-201ENST00000217260 M0QY20 66 aa13.58□□□□□ -0.24
RSPO4-201ENST00000217260 GAGE12JA6NER3 117 aa13.57□□□□□ -0.24
RSPO4-201ENST00000217260 GAGE7O76087 117 aa13.57□□□□□ -0.24
RSPO4-201ENST00000217260 GAGE12FP0CL80 117 aa13.57□□□□□ -0.24
RSPO4-201ENST00000217260 GAGE12GP0CL81 117 aa13.57□□□□□ -0.24
RSPO4-201ENST00000217260 GAGE12IP0CL82 117 aa13.57□□□□□ -0.24
RSPO4-201ENST00000217260 GAGE4Q13068 117 aa13.57□□□□□ -0.24
RSPO4-201ENST00000217260 NTN5Q8WTR8 489 aaPredicted RBP13.57□□□□□ -0.24
RSPO4-201ENST00000217260 IGHV3-33P01772 117 aa13.57□□□□□ -0.24
RSPO4-201ENST00000217260 IFITM1P13164 125 aa13.56□□□□□ -0.24
RSPO4-201ENST00000217260 A0A096LNT2 108 aa13.55□□□□□ -0.24
RSPO4-201ENST00000217260 J3QLI3 93 aa13.55□□□□□ -0.24
RSPO4-201ENST00000217260 CRLF1O75462 422 aa13.55□□□□□ -0.24
RSPO4-201ENST00000217260 HOXD3P31249 432 aaPredicted RBP13.55□□□□□ -0.24
RSPO4-201ENST00000217260 MYO18BQ8IUG5 2567 aa13.55□□□□□ -0.24
RSPO4-201ENST00000217260 Q1RN00 199 aa13.55□□□□□ -0.24
RSPO4-201ENST00000217260 ZNRF2Q8NHG8 242 aa13.55□□□□□ -0.24
RSPO4-201ENST00000217260 VPREB3Q9UKI3 123 aa13.55□□□□□ -0.24
RSPO4-201ENST00000217260 ZANQ9Y493 2812 aa13.55□□□□□ -0.24
RSPO4-201ENST00000217260 ZNF876PQ49A33 203 aa13.55□□□□□ -0.24
RSPO4-201ENST00000217260 AMELXQ99217 191 aa13.55□□□□□ -0.24
RSPO4-201ENST00000217260 ANKRD17O75179 2603 aaKnown RBP13.54□□□□□ -0.24
RSPO4-201ENST00000217260 P0DMU3 169 aa13.54□□□□□ -0.24
RSPO4-201ENST00000217260 FAM231AP0DMU4 169 aa13.54□□□□□ -0.24
RSPO4-201ENST00000217260 FAM231CP0DMU5 169 aa13.54□□□□□ -0.24
RSPO4-201ENST00000217260 ATXN8Q156A1 80 aa13.54□□□□□ -0.24
RSPO4-201ENST00000217260 TMEM263Q8WUH6 116 aaKnown RBP13.54□□□□□ -0.24
RSPO4-201ENST00000217260 TRAV2A0A0B4J234 112 aa13.54□□□□□ -0.24
RSPO4-201ENST00000217260 ELANEP08246 267 aa13.54□□□□□ -0.24
RSPO4-201ENST00000217260 CCDC179H3BU77 68 aa13.53□□□□□ -0.24
RSPO4-201ENST00000217260 CACNA1AO00555 2505 aa13.53□□□□□ -0.24
RSPO4-201ENST00000217260 TRAV8-4A0A0B4J246 113 aa13.53□□□□□ -0.24
RSPO4-201ENST00000217260 A0A0B4J2C4 111 aa13.53□□□□□ -0.24
RSPO4-201ENST00000217260 UBE2E2Q96LR5 201 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms