RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 NDUFA1O15239 70 aa17.65■□□□□ 0.42
TARBP1-201ENST00000040877 F8W735 103 aaPredicted RBP17.64■□□□□ 0.41
TARBP1-201ENST00000040877 RPL18AQ02543 176 aaKnown RBP17.64■□□□□ 0.41
TARBP1-201ENST00000040877 ANKRD39Q53RE8 183 aa17.64■□□□□ 0.41
TARBP1-201ENST00000040877 IGLV10-54A0A075B6I4 117 aa17.64■□□□□ 0.41
TARBP1-201ENST00000040877 BRWD1-AS2P59051 145 aa17.64■□□□□ 0.41
TARBP1-201ENST00000040877 H3BQ85 93 aa17.64■□□□□ 0.41
TARBP1-201ENST00000040877 KLK5Q9Y337 293 aaPredicted RBP17.64■□□□□ 0.41
TARBP1-201ENST00000040877 ANKRD29Q8N6D5 301 aa17.63■□□□□ 0.41
TARBP1-201ENST00000040877 TAX1BP3O14907 124 aa17.63■□□□□ 0.41
TARBP1-201ENST00000040877 C22orf34Q6ZV56 151 aa17.63■□□□□ 0.41
TARBP1-201ENST00000040877 C11orf71Q6IPW1 123 aa17.63■□□□□ 0.41
TARBP1-201ENST00000040877 ATRXP46100 2492 aa17.62■□□□□ 0.41
TARBP1-201ENST00000040877 CHD3Q12873 2000 aaKnown RBP17.62■□□□□ 0.41
TARBP1-201ENST00000040877 HIGD1BQ9P298 99 aa17.62■□□□□ 0.41
TARBP1-201ENST00000040877 RPL39P62891 51 aaKnown RBP17.61■□□□□ 0.41
TARBP1-201ENST00000040877 CRIP3Q6Q6R5 217 aa17.61■□□□□ 0.41
TARBP1-201ENST00000040877 BAALCQ8WXS3 180 aa17.61■□□□□ 0.41
TARBP1-201ENST00000040877 BAALC-AS2P0C853 105 aa17.61■□□□□ 0.41
TARBP1-201ENST00000040877 IL17DQ8TAD2 202 aa17.61■□□□□ 0.41
TARBP1-201ENST00000040877 VSIG2Q96IQ7 327 aa17.61■□□□□ 0.41
TARBP1-201ENST00000040877 TIRAPP58753 221 aa17.61■□□□□ 0.41
TARBP1-201ENST00000040877 EIF4EBP1Q13541 118 aaPredicted RBP17.61■□□□□ 0.41
TARBP1-201ENST00000040877 PIEZO1Q92508 2521 aa17.6■□□□□ 0.41
TARBP1-201ENST00000040877 CRYGBP07316 175 aa17.6■□□□□ 0.41
TARBP1-201ENST00000040877 Q6ZPA2 131 aa17.6■□□□□ 0.41
TARBP1-201ENST00000040877 C20orf203Q8NBC4 194 aa17.6■□□□□ 0.41
TARBP1-201ENST00000040877 C11orf86A6NJI1 115 aa17.6■□□□□ 0.41
TARBP1-201ENST00000040877 MDFICQ9P1T7 246 aa17.6■□□□□ 0.41
TARBP1-201ENST00000040877 PCDH15Q96QU1 1955 aa17.6■□□□□ 0.41
TARBP1-201ENST00000040877 E9PLD3 99 aa17.59■□□□□ 0.41
TARBP1-201ENST00000040877 LY6LH3BQJ8 138 aa17.59■□□□□ 0.41
TARBP1-201ENST00000040877 PTPN13Q12923 2485 aa17.59■□□□□ 0.41
TARBP1-201ENST00000040877 C10orf142B7Z368 130 aa17.59■□□□□ 0.41
TARBP1-201ENST00000040877 NACAE9PAV3 2078 aa17.59■□□□□ 0.41
TARBP1-201ENST00000040877 DEFB1P60022 68 aa17.59■□□□□ 0.41
TARBP1-201ENST00000040877 ESM1Q9NQ30 184 aa17.59■□□□□ 0.41
TARBP1-201ENST00000040877 SMIM9A6NGZ8 99 aa17.58■□□□□ 0.41
TARBP1-201ENST00000040877 K7EQG2 157 aa17.58■□□□□ 0.41
TARBP1-201ENST00000040877 LINC01548A6NM66 108 aa17.58■□□□□ 0.4
TARBP1-201ENST00000040877 MUSTN1Q8IVN3 82 aa17.58■□□□□ 0.4
TARBP1-201ENST00000040877 TNRC6AQ8NDV7 1962 aaKnown RBP17.58■□□□□ 0.4
TARBP1-201ENST00000040877 CRYBA4P53673 196 aa17.58■□□□□ 0.4
TARBP1-201ENST00000040877 OPRPNQ99935 248 aaPredicted RBP17.57■□□□□ 0.4
TARBP1-201ENST00000040877 ACYP1P07311 99 aa17.57■□□□□ 0.4
TARBP1-201ENST00000040877 TINCRA0A1B0GVN0 87 aa17.57■□□□□ 0.4
TARBP1-201ENST00000040877 WFDC11Q8NEX6 87 aa17.57■□□□□ 0.4
TARBP1-201ENST00000040877 FUSP35637 526 aaKnown RBP eCLIP17.57■□□□□ 0.4
TARBP1-201ENST00000040877 A4D1N5 150 aa17.56■□□□□ 0.4
TARBP1-201ENST00000040877 WFDC2Q14508 124 aa17.56■□□□□ 0.4
TARBP1-201ENST00000040877 SMIM20Q8N5G0 67 aa17.56■□□□□ 0.4
TARBP1-201ENST00000040877 TNCP24821 2201 aa17.55■□□□□ 0.4
TARBP1-201ENST00000040877 SONP18583 2426 aaKnown RBP17.55■□□□□ 0.4
TARBP1-201ENST00000040877 FXYD2P54710 66 aa17.54■□□□□ 0.4
TARBP1-201ENST00000040877 SPAG11BQ08648 103 aa17.54■□□□□ 0.4
TARBP1-201ENST00000040877 ZNF843Q8N446 348 aa17.54■□□□□ 0.4
TARBP1-201ENST00000040877 DEFB114Q30KQ6 69 aa17.54■□□□□ 0.4
TARBP1-201ENST00000040877 A0A1B0GXF2 115 aa17.53■□□□□ 0.4
TARBP1-201ENST00000040877 MED12LQ86YW9 2145 aa17.53■□□□□ 0.4
TARBP1-201ENST00000040877 KLK12Q9UKR0 248 aa17.52■□□□□ 0.4
TARBP1-201ENST00000040877 LYRM9A8MSI8 78 aa17.52■□□□□ 0.4
TARBP1-201ENST00000040877 SPANXCQ9NY87 97 aa17.52■□□□□ 0.4
TARBP1-201ENST00000040877 C1orf229Q6ZS94 237 aaPredicted RBP17.52■□□□□ 0.39
TARBP1-201ENST00000040877 IGHV1-58A0A0C4DH39 117 aa17.51■□□□□ 0.39
TARBP1-201ENST00000040877 ALPK3Q96L96 1907 aa17.51■□□□□ 0.39
TARBP1-201ENST00000040877 hADV29S1A0JD25 119 aa17.51■□□□□ 0.39
TARBP1-201ENST00000040877 DEFB4AO15263 64 aa17.51■□□□□ 0.39
TARBP1-201ENST00000040877 ODF1Q14990 250 aa17.51■□□□□ 0.39
TARBP1-201ENST00000040877 DEFB105AQ8NG35 78 aa17.51■□□□□ 0.39
TARBP1-201ENST00000040877 G3V4G9 280 aa17.5■□□□□ 0.39
TARBP1-201ENST00000040877 IGLC6P0CF74 106 aa17.5■□□□□ 0.39
TARBP1-201ENST00000040877 ZNF80P51504 273 aaPredicted RBP17.5■□□□□ 0.39
TARBP1-201ENST00000040877 MLST8Q9BVC4 326 aa17.5■□□□□ 0.39
TARBP1-201ENST00000040877 TEN1Q86WV5 123 aa17.5■□□□□ 0.39
TARBP1-201ENST00000040877 WNK1Q9H4A3 2382 aa17.5■□□□□ 0.39
TARBP1-201ENST00000040877 FRMD6-AS1P0C7T7 363 aa17.5■□□□□ 0.39
TARBP1-201ENST00000040877 ZNF295-AS1Q8N0V1 137 aa17.5■□□□□ 0.39
TARBP1-201ENST00000040877 MUC22E2RYF6 1773 aaPredicted RBP17.5■□□□□ 0.39
TARBP1-201ENST00000040877 RS1O15537 224 aa17.49■□□□□ 0.39
TARBP1-201ENST00000040877 IGLV2-8P01709 118 aa17.49■□□□□ 0.39
TARBP1-201ENST00000040877 TTTY13Q9BZ97 58 aa17.48■□□□□ 0.39
TARBP1-201ENST00000040877 Q6ZSV7 163 aa17.48■□□□□ 0.39
TARBP1-201ENST00000040877 C11orf45Q8TAV5 145 aa17.48■□□□□ 0.39
TARBP1-201ENST00000040877 NAV2Q8IVL1 2488 aa17.48■□□□□ 0.39
TARBP1-201ENST00000040877 SPATA12Q7Z6I5 190 aa17.48■□□□□ 0.39
TARBP1-201ENST00000040877 ZFAND3Q9H8U3 227 aa17.48■□□□□ 0.39
TARBP1-201ENST00000040877 DSCAMO60469 2012 aa17.48■□□□□ 0.39
TARBP1-201ENST00000040877 SHISA2Q6UWI4 295 aa17.46■□□□□ 0.39
TARBP1-201ENST00000040877 NUP210LQ5VU65 1888 aa17.46■□□□□ 0.39
TARBP1-201ENST00000040877 FOXI1Q12951 378 aa17.45■□□□□ 0.38
TARBP1-201ENST00000040877 C14orf177Q52M58 125 aa17.45■□□□□ 0.38
TARBP1-201ENST00000040877 NAV3Q8IVL0 2385 aa17.45■□□□□ 0.38
TARBP1-201ENST00000040877 PSMG3-AS1Q96PY0 264 aa17.45■□□□□ 0.38
TARBP1-201ENST00000040877 H7C423 109 aa17.44■□□□□ 0.38
TARBP1-201ENST00000040877 Q6ZTI0 123 aa17.44■□□□□ 0.38
TARBP1-201ENST00000040877 LINC01620Q4KN68 170 aa17.43■□□□□ 0.38
TARBP1-201ENST00000040877 IGHV4-4A0A075B6R2 117 aa17.43■□□□□ 0.38
TARBP1-201ENST00000040877 INAFM1C9JVW0 142 aa17.43■□□□□ 0.38
TARBP1-201ENST00000040877 LINC00322Q6ZN03 302 aaPredicted RBP17.42■□□□□ 0.38
TARBP1-201ENST00000040877 Q8N6K4 173 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms