RNA–Protein interactions for RNA: ENST00000639169.1

GCSH-208, Transcript of glycine cleavage system protein H, human

TSL 2 BASIC

Gene GCSH, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GCSH-208	ENST00000639169	SUMO2	P61956	95 aa	Known RBP	13.56	□□□□□ -0.24
GCSH-208	ENST00000639169	SMIM2	Q9BVW6	85 aa		13.56	□□□□□ -0.24
GCSH-208	ENST00000639169	JMJD1C	Q15652	2540 aa		13.55	□□□□□ -0.24
GCSH-208	ENST00000639169	NXPH4	O95158	308 aa		13.55	□□□□□ -0.24
GCSH-208	ENST00000639169	PRSS1	P07477	247 aa		13.55	□□□□□ -0.24
GCSH-208	ENST00000639169	CD300E	Q496F6	205 aa	Predicted RBP	13.55	□□□□□ -0.24
GCSH-208	ENST00000639169		Q6ZVH6	145 aa		13.55	□□□□□ -0.24
GCSH-208	ENST00000639169	FAM74A4	Q5TZK3	123 aa		13.55	□□□□□ -0.24
GCSH-208	ENST00000639169	ODF3	Q96PU9	254 aa		13.55	□□□□□ -0.24
GCSH-208	ENST00000639169	OTOG	Q6ZRI0	2925 aa		13.55	□□□□□ -0.24
GCSH-208	ENST00000639169	SLC25A34	Q6PIV7	304 aa		13.54	□□□□□ -0.24
GCSH-208	ENST00000639169	CITED2	Q99967	270 aa	Predicted RBP	13.54	□□□□□ -0.24
GCSH-208	ENST00000639169	PEMT	Q9UBM1	199 aa		13.54	□□□□□ -0.24
GCSH-208	ENST00000639169	IGHV1OR15-1	A0A075B7D0	117 aa		13.54	□□□□□ -0.24
GCSH-208	ENST00000639169	DEFB114	Q30KQ6	69 aa		13.54	□□□□□ -0.24
GCSH-208	ENST00000639169	DEFB125	Q8N687	156 aa		13.54	□□□□□ -0.24
GCSH-208	ENST00000639169	FOXC2	Q99958	501 aa		13.54	□□□□□ -0.24
GCSH-208	ENST00000639169	NUDT3	O95989	172 aa		13.53	□□□□□ -0.24
GCSH-208	ENST00000639169	DYNLRB2	Q8TF09	96 aa		13.53	□□□□□ -0.24
GCSH-208	ENST00000639169	NOTCH3	Q9UM47	2321 aa		13.53	□□□□□ -0.24
GCSH-208	ENST00000639169		H3BMM0	161 aa		13.53	□□□□□ -0.24
GCSH-208	ENST00000639169	DUSP14	O95147	198 aa	Known RBP	13.53	□□□□□ -0.24
GCSH-208	ENST00000639169	ODF1	Q14990	250 aa		13.53	□□□□□ -0.24
GCSH-208	ENST00000639169	C9orf85	Q96MD7	179 aa		13.53	□□□□□ -0.24
GCSH-208	ENST00000639169	HIVEP2	P31629	2446 aa		13.52	□□□□□ -0.24
GCSH-208	ENST00000639169		F5H697	171 aa		13.52	□□□□□ -0.24
GCSH-208	ENST00000639169	MPV17L2	Q567V2	206 aa		13.52	□□□□□ -0.24
GCSH-208	ENST00000639169	SUMO4	Q6EEV6	95 aa		13.52	□□□□□ -0.24
GCSH-208	ENST00000639169	LINC01006	Q8NI28	216 aa		13.52	□□□□□ -0.24
GCSH-208	ENST00000639169	CSTL1	Q9H114	145 aa		13.51	□□□□□ -0.25
GCSH-208	ENST00000639169	MAP6D1	Q9H9H5	199 aa		13.51	□□□□□ -0.25
GCSH-208	ENST00000639169	COX8A	P10176	69 aa		13.5	□□□□□ -0.25
GCSH-208	ENST00000639169	HLA-DRB4	P13762	266 aa		13.5	□□□□□ -0.25
GCSH-208	ENST00000639169	HLA-DRB4	X5D2U9	266 aa		13.5	□□□□□ -0.25
GCSH-208	ENST00000639169	CCL24	O00175	119 aa		13.5	□□□□□ -0.25
GCSH-208	ENST00000639169	CBY3	A6NI87	242 aa		13.49	□□□□□ -0.25
GCSH-208	ENST00000639169	FGF6	P10767	208 aa		13.49	□□□□□ -0.25
GCSH-208	ENST00000639169	PCP2	Q8IVA1	136 aa		13.49	□□□□□ -0.25
GCSH-208	ENST00000639169	POM121L12	Q8N7R1	296 aa		13.49	□□□□□ -0.25
GCSH-208	ENST00000639169	ORAOV1	Q8WV07	137 aa		13.49	□□□□□ -0.25
GCSH-208	ENST00000639169	C20orf78	Q9BR46	151 aa		13.49	□□□□□ -0.25
GCSH-208	ENST00000639169	TTTY13	Q9BZ97	58 aa		13.49	□□□□□ -0.25
GCSH-208	ENST00000639169	HHLA3	Q9XRX5	114 aa		13.49	□□□□□ -0.25
GCSH-208	ENST00000639169	ZNF256	Q9Y2P7	627 aa	Predicted RBP	13.49	□□□□□ -0.25
GCSH-208	ENST00000639169	C2orf91	Q6ZV80	131 aa		13.49	□□□□□ -0.25
GCSH-208	ENST00000639169	TEX29	Q8N6K0	151 aa		13.49	□□□□□ -0.25
GCSH-208	ENST00000639169	IGKV2D-26	A0A0A0MRZ7	120 aa		13.48	□□□□□ -0.25
GCSH-208	ENST00000639169	CRYGD	P07320	174 aa		13.48	□□□□□ -0.25
GCSH-208	ENST00000639169	ZNF876P	Q49A33	203 aa		13.48	□□□□□ -0.25
GCSH-208	ENST00000639169	MRPL35	Q9NZE8	188 aa	Known RBP	13.48	□□□□□ -0.25
GCSH-208	ENST00000639169	COX11	Q9Y6N1	276 aa		13.48	□□□□□ -0.25
GCSH-208	ENST00000639169	NMU	P48645	174 aa		13.47	□□□□□ -0.25
GCSH-208	ENST00000639169	FHL3	Q13643	280 aa		13.47	□□□□□ -0.25
GCSH-208	ENST00000639169	ZMAT4	Q9H898	229 aa		13.47	□□□□□ -0.25
GCSH-208	ENST00000639169	TMEM160	Q9NX00	188 aa		13.47	□□□□□ -0.25
GCSH-208	ENST00000639169	IGHV3-73	A0A0B4J1V6	119 aa		13.46	□□□□□ -0.25
GCSH-208	ENST00000639169	RNASE1	P07998	156 aa	Known RBP	13.46	□□□□□ -0.25
GCSH-208	ENST00000639169	MORN3	Q6PF18	240 aa	Predicted RBP	13.46	□□□□□ -0.25
GCSH-208	ENST00000639169	ZNF56	Q15929	161 aa		13.46	□□□□□ -0.26
GCSH-208	ENST00000639169	ODF3L2	Q3SX64	289 aa		13.45	□□□□□ -0.26
GCSH-208	ENST00000639169	GTSCR1	Q86UQ5	136 aa		13.45	□□□□□ -0.26
GCSH-208	ENST00000639169	ATP5L	O75964	103 aa		13.45	□□□□□ -0.26
GCSH-208	ENST00000639169	PROK1	P58294	105 aa		13.45	□□□□□ -0.26
GCSH-208	ENST00000639169	C2orf66	Q6UXQ4	117 aa		13.45	□□□□□ -0.26
GCSH-208	ENST00000639169	TOMM6	Q96B49	74 aa		13.45	□□□□□ -0.26
GCSH-208	ENST00000639169	SCGB3A1	Q96QR1	104 aa		13.45	□□□□□ -0.26
GCSH-208	ENST00000639169	IGKC	P01834	107 aa		13.44	□□□□□ -0.26
GCSH-208	ENST00000639169	POLR2K	P53803	58 aa	Known RBP	13.44	□□□□□ -0.26
GCSH-208	ENST00000639169	ORMDL2	Q53FV1	153 aa		13.44	□□□□□ -0.26
GCSH-208	ENST00000639169	ERAS	Q7Z444	233 aa		13.44	□□□□□ -0.26
GCSH-208	ENST00000639169		A8MTW9	85 aa		13.43	□□□□□ -0.26
GCSH-208	ENST00000639169	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	13.43	□□□□□ -0.26
GCSH-208	ENST00000639169	PTTG1IP	P53801	180 aa		13.43	□□□□□ -0.26
GCSH-208	ENST00000639169	BVES-AS1	Q5T3Y7	98 aa		13.43	□□□□□ -0.26
GCSH-208	ENST00000639169	ZC2HC1B	Q5TFG8	222 aa		13.43	□□□□□ -0.26
GCSH-208	ENST00000639169	SDHAF1	A6NFY7	115 aa		13.43	□□□□□ -0.26
GCSH-208	ENST00000639169		M0QY20	66 aa		13.43	□□□□□ -0.26
GCSH-208	ENST00000639169	RPL39	P62891	51 aa	Known RBP	13.43	□□□□□ -0.26
GCSH-208	ENST00000639169	SYT8	Q8NBV8	401 aa		13.43	□□□□□ -0.26
GCSH-208	ENST00000639169		Q9UF83	564 aa		13.43	□□□□□ -0.26
GCSH-208	ENST00000639169	FN1	P02751	2386 aa	Known RBP	13.42	□□□□□ -0.26
GCSH-208	ENST00000639169	CCL25	O15444	150 aa		13.42	□□□□□ -0.26
GCSH-208	ENST00000639169	BOD1L2	Q8IYS8	172 aa		13.42	□□□□□ -0.26
GCSH-208	ENST00000639169	XCL2	Q9UBD3	114 aa		13.42	□□□□□ -0.26
GCSH-208	ENST00000639169	TRAV2	A0A0B4J234	112 aa		13.42	□□□□□ -0.26
GCSH-208	ENST00000639169	DPM2	O94777	84 aa		13.42	□□□□□ -0.26
GCSH-208	ENST00000639169		P0DMU3	169 aa		13.42	□□□□□ -0.26
GCSH-208	ENST00000639169	FAM231A	P0DMU4	169 aa		13.42	□□□□□ -0.26
GCSH-208	ENST00000639169	FAM231C	P0DMU5	169 aa		13.42	□□□□□ -0.26
GCSH-208	ENST00000639169	SPAG8	Q99932	426 aa	Predicted RBP	13.42	□□□□□ -0.26
GCSH-208	ENST00000639169	TSSC4	Q9Y5U2	329 aa	Predicted RBP	13.42	□□□□□ -0.26
GCSH-208	ENST00000639169		A0A087WX48	190 aa		13.41	□□□□□ -0.26
GCSH-208	ENST00000639169	VWF	P04275	2813 aa		13.41	□□□□□ -0.26
GCSH-208	ENST00000639169	TRGV11	A0A075B6L2	103 aa		13.41	□□□□□ -0.26
GCSH-208	ENST00000639169	NSUN5P1	Q3KNT7	163 aa		13.41	□□□□□ -0.26
GCSH-208	ENST00000639169	C16orf95	Q9H693	158 aa		13.41	□□□□□ -0.26
GCSH-208	ENST00000639169	LY6G6D	O95868	133 aa		13.4	□□□□□ -0.26
GCSH-208	ENST00000639169	HILS1	P60008	231 aa		13.4	□□□□□ -0.26
GCSH-208	ENST00000639169	ZFP2	Q6ZN57	461 aa		13.4	□□□□□ -0.26
GCSH-208	ENST00000639169	LINC01587	Q99440	93 aa		13.4	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms