RNA–Protein interactions for RNA: ENST00000638573.1

COLCA2-206, Transcript of colorectal cancer associated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COLCA2, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-206ENST00000638573 CCL18P55774 89 aa11.33□□□□□ -0.6
COLCA2-206ENST00000638573 IFITM2Q01629 132 aa11.33□□□□□ -0.6
COLCA2-206ENST00000638573 TMEM241Q24JQ0 296 aa11.33□□□□□ -0.6
COLCA2-206ENST00000638573 SOHLH1Q5JUK2 328 aa11.33□□□□□ -0.6
COLCA2-206ENST00000638573 ZFP2Q6ZN57 461 aa11.33□□□□□ -0.6
COLCA2-206ENST00000638573 FAM231DQ6ZW35 169 aa11.33□□□□□ -0.6
COLCA2-206ENST00000638573 LINC01551Q86U37 167 aa11.33□□□□□ -0.6
COLCA2-206ENST00000638573 OR10AG1Q8NH19 301 aa11.33□□□□□ -0.6
COLCA2-206ENST00000638573 SSBP4Q9BWG4 385 aaPredicted RBP11.33□□□□□ -0.6
COLCA2-206ENST00000638573 NAT8Q9UHE5 227 aa11.33□□□□□ -0.6
COLCA2-206ENST00000638573 PKHD1P08F94 4074 aa11.33□□□□□ -0.6
COLCA2-206ENST00000638573 C9JQL5 133 aa11.32□□□□□ -0.6
COLCA2-206ENST00000638573 GATA1P15976 413 aaPredicted RBP11.32□□□□□ -0.6
COLCA2-206ENST00000638573 MRPL23Q16540 153 aaKnown RBP11.32□□□□□ -0.6
COLCA2-206ENST00000638573 FAM74A4Q5TZK3 123 aa11.32□□□□□ -0.6
COLCA2-206ENST00000638573 SFRP2Q96HF1 295 aa11.32□□□□□ -0.6
COLCA2-206ENST00000638573 PRADC1Q9BSG0 188 aa11.32□□□□□ -0.6
COLCA2-206ENST00000638573 A0A096LPF7 62 aa11.31□□□□□ -0.6
COLCA2-206ENST00000638573 F2Z2F3 143 aa11.31□□□□□ -0.6
COLCA2-206ENST00000638573 NXPH4O95158 308 aa11.31□□□□□ -0.6
COLCA2-206ENST00000638573 IGLC6P0CF74 106 aa11.31□□□□□ -0.6
COLCA2-206ENST00000638573 GYPEP15421 78 aa11.31□□□□□ -0.6
COLCA2-206ENST00000638573 SRIP30626 198 aa11.31□□□□□ -0.6
COLCA2-206ENST00000638573 FAM3BP58499 235 aaPredicted RBP11.31□□□□□ -0.6
COLCA2-206ENST00000638573 SSTP61278 116 aa11.31□□□□□ -0.6
COLCA2-206ENST00000638573 CACNG7P62955 275 aa11.31□□□□□ -0.6
COLCA2-206ENST00000638573 RHOHQ15669 191 aa11.31□□□□□ -0.6
COLCA2-206ENST00000638573 ADIRFQ15847 76 aa11.31□□□□□ -0.6
COLCA2-206ENST00000638573 C15orf54Q8N8G6 183 aa11.31□□□□□ -0.6
COLCA2-206ENST00000638573 JPT2Q9H910 190 aa11.31□□□□□ -0.6
COLCA2-206ENST00000638573 PKD1P98161 4303 aa11.31□□□□□ -0.6
COLCA2-206ENST00000638573 MUC21A0A0G2JKD1 596 aa11.3□□□□□ -0.6
COLCA2-206ENST00000638573 MUC21A0A140T8X8 626 aa11.3□□□□□ -0.6
COLCA2-206ENST00000638573 TRBV6-4A0A1B0GX49 114 aa11.3□□□□□ -0.6
COLCA2-206ENST00000638573 SMIM17P0DL12 118 aa11.3□□□□□ -0.6
COLCA2-206ENST00000638573 C6orf223Q8N319 242 aa11.3□□□□□ -0.6
COLCA2-206ENST00000638573 AP1S3Q96PC3 154 aa11.3□□□□□ -0.6
COLCA2-206ENST00000638573 Q9H8V8 135 aa11.3□□□□□ -0.6
COLCA2-206ENST00000638573 DYNC1H1Q14204 4646 aaKnown RBP11.3□□□□□ -0.6
COLCA2-206ENST00000638573 DNAH11Q96DT5 4516 aa11.29□□□□□ -0.6
COLCA2-206ENST00000638573 A0A087WWL8 130 aa11.29□□□□□ -0.6
COLCA2-206ENST00000638573 A8MWL6 223 aa11.29□□□□□ -0.6
COLCA2-206ENST00000638573 K7EQD1 137 aa11.29□□□□□ -0.6
COLCA2-206ENST00000638573 CT83Q5H943 113 aa11.29□□□□□ -0.6
COLCA2-206ENST00000638573 NEGR1Q7Z3B1 354 aa11.29□□□□□ -0.6
COLCA2-206ENST00000638573 SLC25A29Q8N8R3 303 aa11.29□□□□□ -0.6
COLCA2-206ENST00000638573 SAMD10Q9BYL1 202 aa11.29□□□□□ -0.6
COLCA2-206ENST00000638573 RPL23P62829 140 aaKnown RBP11.28□□□□□ -0.6
COLCA2-206ENST00000638573 LYZL1Q6UWQ5 148 aa11.28□□□□□ -0.6
COLCA2-206ENST00000638573 SH2D6Q7Z4S9 175 aa11.28□□□□□ -0.6
COLCA2-206ENST00000638573 ISOC2Q96AB3 205 aa11.28□□□□□ -0.6
COLCA2-206ENST00000638573 KRTAP4-5Q9BYR2 181 aa11.28□□□□□ -0.6
COLCA2-206ENST00000638573 OSTCQ9NRP0 149 aa11.28□□□□□ -0.6
COLCA2-206ENST00000638573 CTRLP40313 264 aa11.27□□□□□ -0.61
COLCA2-206ENST00000638573 ZNF56Q15929 161 aa11.27□□□□□ -0.61
COLCA2-206ENST00000638573 UFSP1Q6NVU6 142 aa11.27□□□□□ -0.61
COLCA2-206ENST00000638573 BORCS7Q96B45 105 aa11.27□□□□□ -0.61
COLCA2-206ENST00000638573 MRPS16Q9Y3D3 137 aaKnown RBP11.27□□□□□ -0.61
COLCA2-206ENST00000638573 CRYGDP07320 174 aa11.26□□□□□ -0.61
COLCA2-206ENST00000638573 TRGC1P0CF51 173 aa11.26□□□□□ -0.61
COLCA2-206ENST00000638573 LOC100131303A0A0U1RQF7 123 aa11.25□□□□□ -0.61
COLCA2-206ENST00000638573 WDR73Q6P4I2 378 aa11.25□□□□□ -0.61
COLCA2-206ENST00000638573 UQCC3Q6UW78 93 aa11.25□□□□□ -0.61
COLCA2-206ENST00000638573 C14orf178Q8N769 122 aaPredicted RBP11.25□□□□□ -0.61
COLCA2-206ENST00000638573 OR10G8Q8NGN5 311 aa11.25□□□□□ -0.61
COLCA2-206ENST00000638573 F5H697 171 aa11.24□□□□□ -0.61
COLCA2-206ENST00000638573 FUSP35637 526 aaKnown RBP eCLIP11.24□□□□□ -0.61
COLCA2-206ENST00000638573 RAB4BP61018 213 aa11.24□□□□□ -0.61
COLCA2-206ENST00000638573 TWIST1Q15672 202 aa11.24□□□□□ -0.61
COLCA2-206ENST00000638573 TSKUQ8WUA8 353 aa11.24□□□□□ -0.61
COLCA2-206ENST00000638573 UPK3BQ9BT76 320 aa11.24□□□□□ -0.61
COLCA2-206ENST00000638573 GFRA4Q9GZZ7 299 aa11.24□□□□□ -0.61
COLCA2-206ENST00000638573 TNFRSF18Q9Y5U5 241 aa11.24□□□□□ -0.61
COLCA2-206ENST00000638573 MGPP08493 103 aa11.23□□□□□ -0.61
COLCA2-206ENST00000638573 NTF3P20783 257 aa11.23□□□□□ -0.61
COLCA2-206ENST00000638573 Q6ZSN1 163 aa11.23□□□□□ -0.61
COLCA2-206ENST00000638573 SMIM15Q7Z3B0 74 aa11.23□□□□□ -0.61
COLCA2-206ENST00000638573 GTSF1Q8WW33 167 aa11.23□□□□□ -0.61
COLCA2-206ENST00000638573 PGLYRP4Q96LB8 373 aa11.23□□□□□ -0.61
COLCA2-206ENST00000638573 CNFNQ9BYD5 112 aa11.23□□□□□ -0.61
COLCA2-206ENST00000638573 FAM231BA6NCW3 169 aa11.22□□□□□ -0.61
COLCA2-206ENST00000638573 GAGE12JA6NER3 117 aa11.22□□□□□ -0.61
COLCA2-206ENST00000638573 C16orf90A8MZG2 172 aa11.22□□□□□ -0.61
COLCA2-206ENST00000638573 KRTAP10-2P60368 255 aa11.22□□□□□ -0.61
COLCA2-206ENST00000638573 PNRC1Q12796 327 aaPredicted RBP11.22□□□□□ -0.61
COLCA2-206ENST00000638573 GAGE1Q13065 139 aa11.22□□□□□ -0.61
COLCA2-206ENST00000638573 GAGE4Q13068 117 aa11.22□□□□□ -0.61
COLCA2-206ENST00000638573 GAGE5Q13069 117 aa11.22□□□□□ -0.61
COLCA2-206ENST00000638573 GAGE13Q4V321 117 aa11.22□□□□□ -0.61
COLCA2-206ENST00000638573 LYPD5Q6UWN5 251 aa11.22□□□□□ -0.61
COLCA2-206ENST00000638573 COMMD7Q86VX2 200 aa11.22□□□□□ -0.61
COLCA2-206ENST00000638573 MSRB1Q9NZV6 116 aa11.22□□□□□ -0.61
COLCA2-206ENST00000638573 V9GYV3 84 aa11.22□□□□□ -0.61
COLCA2-206ENST00000638573 TRBV10-1A0A0K0K1A3 114 aa11.21□□□□□ -0.61
COLCA2-206ENST00000638573 HIGD1CA8MV81 97 aa11.21□□□□□ -0.61
COLCA2-206ENST00000638573 RPL36AP83881 106 aaKnown RBP11.21□□□□□ -0.61
COLCA2-206ENST00000638573 ATP6V0E2Q8NHE4 81 aa11.21□□□□□ -0.61
COLCA2-206ENST00000638573 RPL36ALQ969Q0 106 aaKnown RBP11.21□□□□□ -0.61
COLCA2-206ENST00000638573 DPH3P1Q9H4G8 78 aa11.21□□□□□ -0.61
COLCA2-206ENST00000638573 H7C1H1 209 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 145.5 ms