RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 TEX46H3BTG2 121 aa12.75□□□□□ -0.37
CLN6-221ENST00000637494 LAGE3Q14657 143 aa12.75□□□□□ -0.37
CLN6-221ENST00000637494 UFSP1Q6NVU6 142 aa12.75□□□□□ -0.37
CLN6-221ENST00000637494 BAGE2Q86Y30 109 aa12.75□□□□□ -0.37
CLN6-221ENST00000637494 TM2D2Q9BX73 214 aa12.75□□□□□ -0.37
CLN6-221ENST00000637494 SCRT2Q9NQ03 307 aa12.75□□□□□ -0.37
CLN6-221ENST00000637494 A0A087WWL8 130 aa12.74□□□□□ -0.37
CLN6-221ENST00000637494 TOR2AQ5JU69 321 aa12.74□□□□□ -0.37
CLN6-221ENST00000637494 C14orf178Q8N769 122 aaPredicted RBP12.74□□□□□ -0.37
CLN6-221ENST00000637494 MANBALQ9NQG1 85 aa12.74□□□□□ -0.37
CLN6-221ENST00000637494 URGCP-MRPS24S4R325 110 aa12.74□□□□□ -0.37
CLN6-221ENST00000637494 RYR1P21817 5038 aa12.73□□□□□ -0.37
CLN6-221ENST00000637494 LINC00694P0DN24 101 aa12.73□□□□□ -0.37
CLN6-221ENST00000637494 FUSP35637 526 aaKnown RBP eCLIP12.73□□□□□ -0.37
CLN6-221ENST00000637494 RAB5CP51148 216 aa12.73□□□□□ -0.37
CLN6-221ENST00000637494 KRTAP4-5Q9BYR2 181 aa12.73□□□□□ -0.37
CLN6-221ENST00000637494 GCSHP23434 173 aa12.72□□□□□ -0.37
CLN6-221ENST00000637494 PRR27Q6MZM9 219 aa12.72□□□□□ -0.37
CLN6-221ENST00000637494 NTN5Q8WTR8 489 aaPredicted RBP12.72□□□□□ -0.37
CLN6-221ENST00000637494 PCLOQ9Y6V0 5065 aa12.72□□□□□ -0.37
CLN6-221ENST00000637494 TRAV8-3A0A0A6YYJ7 113 aa12.71□□□□□ -0.37
CLN6-221ENST00000637494 TRBV10-1A0A0K0K1A3 114 aa12.71□□□□□ -0.37
CLN6-221ENST00000637494 CXCL1P09341 107 aa12.71□□□□□ -0.37
CLN6-221ENST00000637494 RPL36AP83881 106 aaKnown RBP12.71□□□□□ -0.37
CLN6-221ENST00000637494 KCNIP4Q6PIL6 250 aa12.71□□□□□ -0.37
CLN6-221ENST00000637494 RPL36ALQ969Q0 106 aaKnown RBP12.71□□□□□ -0.37
CLN6-221ENST00000637494 GNG13Q9P2W3 67 aa12.71□□□□□ -0.37
CLN6-221ENST00000637494 IGLV5-52A0A0A0MRZ9 124 aa12.7□□□□□ -0.38
CLN6-221ENST00000637494 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.7□□□□□ -0.38
CLN6-221ENST00000637494 RPL19P84098 196 aaKnown RBP12.69□□□□□ -0.38
CLN6-221ENST00000637494 ZNF56Q15929 161 aa12.69□□□□□ -0.38
CLN6-221ENST00000637494 SPANXN1Q5VSR9 72 aa12.69□□□□□ -0.38
CLN6-221ENST00000637494 MLST8Q9BVC4 326 aa12.69□□□□□ -0.38
CLN6-221ENST00000637494 LRP1BQ9NZR2 4599 aa12.68□□□□□ -0.38
CLN6-221ENST00000637494 LRCOL1A6NCL2 159 aa12.68□□□□□ -0.38
CLN6-221ENST00000637494 RPL35P42766 123 aaKnown RBP12.68□□□□□ -0.38
CLN6-221ENST00000637494 RAB4BP61018 213 aa12.68□□□□□ -0.38
CLN6-221ENST00000637494 RMI2Q96E14 147 aa12.68□□□□□ -0.38
CLN6-221ENST00000637494 Q9UF83 564 aa12.68□□□□□ -0.38
CLN6-221ENST00000637494 COX11Q9Y6N1 276 aa12.68□□□□□ -0.38
CLN6-221ENST00000637494 TRAV1-1A0A0B4J248 108 aa12.67□□□□□ -0.38
CLN6-221ENST00000637494 IFNA1P01562 189 aa12.67□□□□□ -0.38
CLN6-221ENST00000637494 DAZ4Q86SG3 579 aaKnown RBP12.67□□□□□ -0.38
CLN6-221ENST00000637494 Q8N814 137 aa12.67□□□□□ -0.38
CLN6-221ENST00000637494 DAZAP1Q96EP5 407 aaKnown RBP12.67□□□□□ -0.38
CLN6-221ENST00000637494 DAZ3Q9NR90 486 aaKnown RBP12.67□□□□□ -0.38
CLN6-221ENST00000637494 TRBV7-3A0A075B6L6 115 aa12.66□□□□□ -0.38
CLN6-221ENST00000637494 A0A087WX48 190 aa12.66□□□□□ -0.38
CLN6-221ENST00000637494 EPM2AB3EWF7 344 aa12.66□□□□□ -0.38
CLN6-221ENST00000637494 OR5AL1P0C617 328 aa12.66□□□□□ -0.38
CLN6-221ENST00000637494 SMIM17P0DL12 118 aa12.66□□□□□ -0.38
CLN6-221ENST00000637494 KRTAP10-1P60331 282 aa12.66□□□□□ -0.38
CLN6-221ENST00000637494 ELOBQ15370 118 aa12.66□□□□□ -0.38
CLN6-221ENST00000637494 OR10AG1Q8NH19 301 aa12.66□□□□□ -0.38
CLN6-221ENST00000637494 F5H697 171 aa12.65□□□□□ -0.38
CLN6-221ENST00000637494 SNAI2O43623 268 aa12.65□□□□□ -0.38
CLN6-221ENST00000637494 SULT1A2P50226 295 aa12.65□□□□□ -0.38
CLN6-221ENST00000637494 CCL20P78556 96 aa12.65□□□□□ -0.38
CLN6-221ENST00000637494 C11orf52Q96A22 123 aa12.65□□□□□ -0.38
CLN6-221ENST00000637494 CHCHD7Q9BUK0 85 aa12.65□□□□□ -0.38
CLN6-221ENST00000637494 HSPG2P98160 4391 aa12.64□□□□□ -0.39
CLN6-221ENST00000637494 UBE2D3P61077 147 aa12.64□□□□□ -0.39
CLN6-221ENST00000637494 UBE2D2P62837 147 aa12.64□□□□□ -0.39
CLN6-221ENST00000637494 NIT1Q86X76 327 aa12.64□□□□□ -0.39
CLN6-221ENST00000637494 TCTE3Q8IZS6 198 aa12.64□□□□□ -0.39
CLN6-221ENST00000637494 Q8N3U1 123 aa12.64□□□□□ -0.39
CLN6-221ENST00000637494 SSBP4Q9BWG4 385 aaPredicted RBP12.64□□□□□ -0.39
CLN6-221ENST00000637494 PDE6DO43924 150 aa12.63□□□□□ -0.39
CLN6-221ENST00000637494 XGP55808 180 aa12.63□□□□□ -0.39
CLN6-221ENST00000637494 RPS20P60866 119 aaKnown RBP12.63□□□□□ -0.39
CLN6-221ENST00000637494 SSTP61278 116 aa12.63□□□□□ -0.39
CLN6-221ENST00000637494 CENPWQ5EE01 88 aa12.63□□□□□ -0.39
CLN6-221ENST00000637494 OR10G8Q8NGN5 311 aa12.63□□□□□ -0.39
CLN6-221ENST00000637494 FRZBQ92765 325 aa12.63□□□□□ -0.39
CLN6-221ENST00000637494 AP1S3Q96PC3 154 aa12.63□□□□□ -0.39
CLN6-221ENST00000637494 BIN3Q9NQY0 253 aa12.63□□□□□ -0.39
CLN6-221ENST00000637494 MUC21A0A0G2JKD1 596 aa12.62□□□□□ -0.39
CLN6-221ENST00000637494 MUC21A0A140T8X8 626 aa12.62□□□□□ -0.39
CLN6-221ENST00000637494 XKRY2A2RUG3 117 aa12.62□□□□□ -0.39
CLN6-221ENST00000637494 GNG4P50150 75 aa12.62□□□□□ -0.39
CLN6-221ENST00000637494 MEF2BQ02080 365 aaPredicted RBP12.62□□□□□ -0.39
CLN6-221ENST00000637494 SLC51BQ86UW2 128 aa12.62□□□□□ -0.39
CLN6-221ENST00000637494 SMIM12Q96EX1 92 aa12.62□□□□□ -0.39
CLN6-221ENST00000637494 DERL1Q9BUN8 251 aa12.62□□□□□ -0.39
CLN6-221ENST00000637494 TMEM262E9PQX1 116 aa12.61□□□□□ -0.39
CLN6-221ENST00000637494 PKIAP61925 76 aa12.61□□□□□ -0.39
CLN6-221ENST00000637494 TMEM70Q9BUB7 260 aa12.61□□□□□ -0.39
CLN6-221ENST00000637494 TPPP3Q9BW30 176 aa12.61□□□□□ -0.39
CLN6-221ENST00000637494 KLK12Q9UKR0 248 aa12.61□□□□□ -0.39
CLN6-221ENST00000637494 DNAH5Q8TE73 4624 aa12.61□□□□□ -0.39
CLN6-221ENST00000637494 IGKV2D-24A0A075B6R9 120 aa12.6□□□□□ -0.39
CLN6-221ENST00000637494 C1QBP02746 253 aa12.6□□□□□ -0.39
CLN6-221ENST00000637494 TMEM97Q5BJF2 176 aa12.6□□□□□ -0.39
CLN6-221ENST00000637494 NEXN-AS1Q8NBZ9 246 aa12.6□□□□□ -0.39
CLN6-221ENST00000637494 OR2D3Q8NGH3 330 aa12.6□□□□□ -0.39
CLN6-221ENST00000637494 UBE2WQ96B02 151 aa12.6□□□□□ -0.39
CLN6-221ENST00000637494 MED9Q9NWA0 146 aa12.6□□□□□ -0.39
CLN6-221ENST00000637494 TRBV6-8A0A0A6YYG3 113 aa12.59□□□□□ -0.39
CLN6-221ENST00000637494 RBFOX3A6NFN3 312 aa12.59□□□□□ -0.39
CLN6-221ENST00000637494 TAGLN2P37802 199 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms