RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 F8VRH5 84 aa8.5□□□□□ -1.05
VPS8-227ENST00000625842 PRB4P10163 310 aaPredicted RBP8.5□□□□□ -1.05
VPS8-227ENST00000625842 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.5□□□□□ -1.05
VPS8-227ENST00000625842 IGKV2-29A2NJV5 120 aaPredicted RBP8.5□□□□□ -1.05
VPS8-227ENST00000625842 CTAG1AP78358 180 aa8.5□□□□□ -1.05
VPS8-227ENST00000625842 WDR81Q562E7 1941 aa8.49□□□□□ -1.05
VPS8-227ENST00000625842 EGR2P11161 476 aaPredicted RBP8.49□□□□□ -1.05
VPS8-227ENST00000625842 MIAQ16674 131 aa8.49□□□□□ -1.05
VPS8-227ENST00000625842 MRPL51Q4U2R6 128 aaKnown RBP8.49□□□□□ -1.05
VPS8-227ENST00000625842 DDTP30046 118 aa8.49□□□□□ -1.05
VPS8-227ENST00000625842 C11orf71Q6IPW1 123 aa8.49□□□□□ -1.05
VPS8-227ENST00000625842 Q6ZVH6 145 aa8.49□□□□□ -1.05
VPS8-227ENST00000625842 ZNF747Q9BV97 191 aa8.49□□□□□ -1.05
VPS8-227ENST00000625842 LRRK2Q5S007 2527 aa8.49□□□□□ -1.05
VPS8-227ENST00000625842 CXCL1P09341 107 aa8.49□□□□□ -1.05
VPS8-227ENST00000625842 DIRC1Q969H9 104 aa8.49□□□□□ -1.05
VPS8-227ENST00000625842 FXYD5Q96DB9 178 aa8.49□□□□□ -1.05
VPS8-227ENST00000625842 ORMDL1Q9P0S3 153 aa8.49□□□□□ -1.05
VPS8-227ENST00000625842 A8MWP6 167 aa8.49□□□□□ -1.05
VPS8-227ENST00000625842 TEX22C9J3V5 150 aa8.49□□□□□ -1.05
VPS8-227ENST00000625842 SEC61GP60059 68 aa8.49□□□□□ -1.05
VPS8-227ENST00000625842 Q8N1Y9 231 aa8.49□□□□□ -1.05
VPS8-227ENST00000625842 Q9H8V8 135 aa8.49□□□□□ -1.05
VPS8-227ENST00000625842 J3QQQ9 107 aa8.48□□□□□ -1.05
VPS8-227ENST00000625842 TRACP01848 142 aa8.48□□□□□ -1.05
VPS8-227ENST00000625842 RSPO1Q2MKA7 263 aaPredicted RBP8.48□□□□□ -1.05
VPS8-227ENST00000625842 Q5BKY6 102 aa8.48□□□□□ -1.05
VPS8-227ENST00000625842 FREM1Q5H8C1 2179 aa8.48□□□□□ -1.05
VPS8-227ENST00000625842 A0A087X0K7 114 aa8.48□□□□□ -1.05
VPS8-227ENST00000625842 GAGE12HA6NDE8 117 aa8.48□□□□□ -1.05
VPS8-227ENST00000625842 ABCA2Q9BZC7 2435 aa8.48□□□□□ -1.05
VPS8-227ENST00000625842 SPINK8P0C7L1 97 aa8.48□□□□□ -1.05
VPS8-227ENST00000625842 GUSBP1Q15486 140 aa8.48□□□□□ -1.05
VPS8-227ENST00000625842 FAM110AQ9BQ89 295 aa8.48□□□□□ -1.05
VPS8-227ENST00000625842 NACAE9PAV3 2078 aa8.48□□□□□ -1.05
VPS8-227ENST00000625842 A0A1B0GV72 72 aa8.48□□□□□ -1.05
VPS8-227ENST00000625842 RBM3P98179 157 aaKnown RBP8.48□□□□□ -1.05
VPS8-227ENST00000625842 IGKV2D-26A0A0A0MRZ7 120 aa8.47□□□□□ -1.05
VPS8-227ENST00000625842 IGKV1-17P01599 117 aa8.47□□□□□ -1.05
VPS8-227ENST00000625842 CARD19Q96LW7 228 aa8.47□□□□□ -1.05
VPS8-227ENST00000625842 FGF23Q9GZV9 251 aaPredicted RBP8.47□□□□□ -1.05
VPS8-227ENST00000625842 ZNF462Q96JM2 2506 aa8.47□□□□□ -1.05
VPS8-227ENST00000625842 SYS1-DBNDD2H3BUS1 97 aa8.47□□□□□ -1.05
VPS8-227ENST00000625842 MP68P56378 58 aa8.47□□□□□ -1.05
VPS8-227ENST00000625842 FNDC4Q9H6D8 234 aaPredicted RBP8.47□□□□□ -1.05
VPS8-227ENST00000625842 MED13Q9UHV7 2174 aa8.47□□□□□ -1.05
VPS8-227ENST00000625842 NYNRINQ9P2P1 1898 aaKnown RBP8.46□□□□□ -1.05
VPS8-227ENST00000625842 IGLV2-18A0A075B6J9 118 aa8.46□□□□□ -1.05
VPS8-227ENST00000625842 UBE2D3P61077 147 aa8.46□□□□□ -1.05
VPS8-227ENST00000625842 PHF3Q92576 2039 aaKnown RBP8.46□□□□□ -1.05
VPS8-227ENST00000625842 WI2-2373I1.2A0A1W2PRP0 233 aa8.46□□□□□ -1.06
VPS8-227ENST00000625842 M0R2N4 97 aa8.46□□□□□ -1.06
VPS8-227ENST00000625842 KRTAP27-1Q3LI81 207 aa8.46□□□□□ -1.06
VPS8-227ENST00000625842 SS18L2Q9UHA2 77 aa8.46□□□□□ -1.06
VPS8-227ENST00000625842 NDUFS6O75380 124 aaKnown RBP8.46□□□□□ -1.06
VPS8-227ENST00000625842 REG3AQ06141 175 aa8.46□□□□□ -1.06
VPS8-227ENST00000625842 HIGD2AQ9BW72 106 aa8.45□□□□□ -1.06
VPS8-227ENST00000625842 C1orf134Q5TEV5 83 aa8.45□□□□□ -1.06
VPS8-227ENST00000625842 ZNF581Q9P0T4 197 aa8.45□□□□□ -1.06
VPS8-227ENST00000625842 ZSWIM8A7E2V4 1837 aa8.45□□□□□ -1.06
VPS8-227ENST00000625842 ZNF664Q8N3J9 261 aa8.45□□□□□ -1.06
VPS8-227ENST00000625842 K7EQG2 157 aa8.45□□□□□ -1.06
VPS8-227ENST00000625842 EBI3Q14213 229 aa8.44□□□□□ -1.06
VPS8-227ENST00000625842 PDE6GP18545 87 aa8.44□□□□□ -1.06
VPS8-227ENST00000625842 NLRC5Q86WI3 1866 aa8.44□□□□□ -1.06
VPS8-227ENST00000625842 SYCNQ0VAF6 134 aa8.44□□□□□ -1.06
VPS8-227ENST00000625842 KPRPQ5T749 579 aaPredicted RBP8.44□□□□□ -1.06
VPS8-227ENST00000625842 C11orf52Q96A22 123 aa8.44□□□□□ -1.06
VPS8-227ENST00000625842 SND1-IT1Q9HBX3 110 aa8.44□□□□□ -1.06
VPS8-227ENST00000625842 MAJINQ3KP22 176 aa8.43□□□□□ -1.06
VPS8-227ENST00000625842 OXLD1Q5BKU9 147 aa8.43□□□□□ -1.06
VPS8-227ENST00000625842 C1orf147Q96MC9 270 aaPredicted RBP8.43□□□□□ -1.06
VPS8-227ENST00000625842 IGHV4-28A0A0C4DH34 117 aa8.43□□□□□ -1.06
VPS8-227ENST00000625842 ZNF702PQ9H963 129 aa8.43□□□□□ -1.06
VPS8-227ENST00000625842 PLXNA4Q9HCM2 1894 aa8.43□□□□□ -1.06
VPS8-227ENST00000625842 TRAV26-2A0A0B4J265 109 aa8.43□□□□□ -1.06
VPS8-227ENST00000625842 FAM19A1Q7Z5A9 133 aa8.43□□□□□ -1.06
VPS8-227ENST00000625842 SHANK1Q9Y566 2161 aa8.43□□□□□ -1.06
VPS8-227ENST00000625842 TRBV6-4A0A1B0GX49 114 aa8.43□□□□□ -1.06
VPS8-227ENST00000625842 C9orf85Q96MD7 179 aa8.43□□□□□ -1.06
VPS8-227ENST00000625842 SIGMAR1Q99720 223 aa8.43□□□□□ -1.06
VPS8-227ENST00000625842 DOCK9Q9BZ29 2069 aa8.42□□□□□ -1.06
VPS8-227ENST00000625842 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.42□□□□□ -1.06
VPS8-227ENST00000625842 ZNF124Q15973 351 aa8.42□□□□□ -1.06
VPS8-227ENST00000625842 NPSP0C0P6 89 aa8.42□□□□□ -1.06
VPS8-227ENST00000625842 C16orf95Q9H693 158 aa8.42□□□□□ -1.06
VPS8-227ENST00000625842 Q6ZSR3 168 aa8.42□□□□□ -1.06
VPS8-227ENST00000625842 IGHV4-30-4P0DP06 118 aa8.41□□□□□ -1.06
VPS8-227ENST00000625842 BTCP35070 178 aa8.41□□□□□ -1.06
VPS8-227ENST00000625842 NREPQ16612 68 aa8.41□□□□□ -1.06
VPS8-227ENST00000625842 SPRNQ5BIV9 151 aa8.41□□□□□ -1.06
VPS8-227ENST00000625842 LGALS9CQ6DKI2 356 aa8.41□□□□□ -1.06
VPS8-227ENST00000625842 A4D1N5 150 aa8.41□□□□□ -1.06
VPS8-227ENST00000625842 TRBV12-3P01733 135 aa8.41□□□□□ -1.06
VPS8-227ENST00000625842 DSCAMO60469 2012 aa8.41□□□□□ -1.06
VPS8-227ENST00000625842 CHCHD7Q9BUK0 85 aa8.41□□□□□ -1.06
VPS8-227ENST00000625842 RSPO3Q9BXY4 272 aaPredicted RBP8.41□□□□□ -1.06
VPS8-227ENST00000625842 TRBV6-1A0A0K0K1D8 114 aa8.41□□□□□ -1.06
VPS8-227ENST00000625842 LOC107984640A0A0U1RRK4 108 aa8.41□□□□□ -1.06
VPS8-227ENST00000625842 RS1O15537 224 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms