RNA–Protein interactions for RNA: ENST00000621152.4

SMC6-210, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 3

Gene SMC6, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-210ENST00000621152 EIF5AP63241 154 aaKnown RBP13.76□□□□□ -0.21
SMC6-210ENST00000621152 FAM74A4Q5TZK3 123 aa13.76□□□□□ -0.21
SMC6-210ENST00000621152 SFRP2Q96HF1 295 aa13.76□□□□□ -0.21
SMC6-210ENST00000621152 A0A087WWL8 130 aa13.75□□□□□ -0.21
SMC6-210ENST00000621152 M0R381 172 aa13.75□□□□□ -0.21
SMC6-210ENST00000621152 RHODO00212 210 aa13.75□□□□□ -0.21
SMC6-210ENST00000621152 TMUB2Q71RG4 321 aa13.75□□□□□ -0.21
SMC6-210ENST00000621152 SCO2A0A1W2PP80 73 aa13.74□□□□□ -0.21
SMC6-210ENST00000621152 PFDN1O60925 122 aa13.74□□□□□ -0.21
SMC6-210ENST00000621152 KRTAP10-1P60331 282 aa13.74□□□□□ -0.21
SMC6-210ENST00000621152 BAGE2Q86Y30 109 aa13.74□□□□□ -0.21
SMC6-210ENST00000621152 LRCOL1A6NCL2 159 aa13.73□□□□□ -0.21
SMC6-210ENST00000621152 LINC00694P0DN24 101 aa13.73□□□□□ -0.21
SMC6-210ENST00000621152 ZFP82Q8N141 532 aa13.72□□□□□ -0.21
SMC6-210ENST00000621152 Q8N3U1 123 aa13.72□□□□□ -0.21
SMC6-210ENST00000621152 A0A087WWC5 75 aa13.71□□□□□ -0.21
SMC6-210ENST00000621152 GCSHP23434 173 aa13.71□□□□□ -0.21
SMC6-210ENST00000621152 XGP55808 180 aa13.71□□□□□ -0.21
SMC6-210ENST00000621152 MLST8Q9BVC4 326 aa13.71□□□□□ -0.21
SMC6-210ENST00000621152 CCL20P78556 96 aa13.7□□□□□ -0.22
SMC6-210ENST00000621152 RPL19P84098 196 aaKnown RBP13.7□□□□□ -0.22
SMC6-210ENST00000621152 TM2D2Q9BX73 214 aa13.7□□□□□ -0.22
SMC6-210ENST00000621152 DNAH5Q8TE73 4624 aa13.7□□□□□ -0.22
SMC6-210ENST00000621152 APOBP04114 4563 aaKnown RBP13.69□□□□□ -0.22
SMC6-210ENST00000621152 DAZ4Q86SG3 579 aaKnown RBP13.69□□□□□ -0.22
SMC6-210ENST00000621152 DAZ3Q9NR90 486 aaKnown RBP13.69□□□□□ -0.22
SMC6-210ENST00000621152 IGLV5-52A0A0A0MRZ9 124 aa13.68□□□□□ -0.22
SMC6-210ENST00000621152 LAGE3Q14657 143 aa13.68□□□□□ -0.22
SMC6-210ENST00000621152 PRR27Q6MZM9 219 aa13.67□□□□□ -0.22
SMC6-210ENST00000621152 GNG13Q9P2W3 67 aa13.67□□□□□ -0.22
SMC6-210ENST00000621152 TRAV8-3A0A0A6YYJ7 113 aa13.66□□□□□ -0.22
SMC6-210ENST00000621152 TRBV10-1A0A0K0K1A3 114 aa13.66□□□□□ -0.22
SMC6-210ENST00000621152 RPL35P42766 123 aaKnown RBP13.66□□□□□ -0.22
SMC6-210ENST00000621152 RPL36AP83881 106 aaKnown RBP13.66□□□□□ -0.22
SMC6-210ENST00000621152 Q8N814 137 aa13.66□□□□□ -0.22
SMC6-210ENST00000621152 OR10AG1Q8NH19 301 aa13.66□□□□□ -0.22
SMC6-210ENST00000621152 RPL36ALQ969Q0 106 aaKnown RBP13.66□□□□□ -0.22
SMC6-210ENST00000621152 MUC21A0A0G2JKD1 596 aa13.65□□□□□ -0.22
SMC6-210ENST00000621152 MUC21A0A140T8X8 626 aa13.65□□□□□ -0.22
SMC6-210ENST00000621152 EPM2AB3EWF7 344 aa13.65□□□□□ -0.22
SMC6-210ENST00000621152 CXCL1P09341 107 aa13.65□□□□□ -0.22
SMC6-210ENST00000621152 RAB5CP51148 216 aa13.65□□□□□ -0.22
SMC6-210ENST00000621152 SSTP61278 116 aa13.65□□□□□ -0.22
SMC6-210ENST00000621152 TOR2AQ5JU69 321 aa13.65□□□□□ -0.22
SMC6-210ENST00000621152 EIF5AL1Q6IS14 154 aaKnown RBP13.65□□□□□ -0.22
SMC6-210ENST00000621152 NTN5Q8WTR8 489 aaPredicted RBP13.65□□□□□ -0.22
SMC6-210ENST00000621152 SSBP4Q9BWG4 385 aaPredicted RBP13.65□□□□□ -0.22
SMC6-210ENST00000621152 MANBALQ9NQG1 85 aa13.65□□□□□ -0.22
SMC6-210ENST00000621152 URGCP-MRPS24S4R325 110 aa13.65□□□□□ -0.22
SMC6-210ENST00000621152 ABCA13Q86UQ4 5058 aa13.65□□□□□ -0.22
SMC6-210ENST00000621152 TRBV7-3A0A075B6L6 115 aa13.64□□□□□ -0.23
SMC6-210ENST00000621152 TRAV1-1A0A0B4J248 108 aa13.64□□□□□ -0.23
SMC6-210ENST00000621152 RAB4BP61018 213 aa13.64□□□□□ -0.23
SMC6-210ENST00000621152 NIT1Q86X76 327 aa13.64□□□□□ -0.23
SMC6-210ENST00000621152 TEX46H3BTG2 121 aa13.63□□□□□ -0.23
SMC6-210ENST00000621152 SNAI2O43623 268 aa13.63□□□□□ -0.23
SMC6-210ENST00000621152 UBE2D3P61077 147 aa13.63□□□□□ -0.23
SMC6-210ENST00000621152 UBE2D2P62837 147 aa13.63□□□□□ -0.23
SMC6-210ENST00000621152 SPANXN1Q5VSR9 72 aa13.63□□□□□ -0.23
SMC6-210ENST00000621152 DERL1Q9BUN8 251 aa13.63□□□□□ -0.23
SMC6-210ENST00000621152 OR5AL1P0C617 328 aa13.62□□□□□ -0.23
SMC6-210ENST00000621152 F5H697 171 aa13.61□□□□□ -0.23
SMC6-210ENST00000621152 SULT1A2P50226 295 aa13.61□□□□□ -0.23
SMC6-210ENST00000621152 ZNF56Q15929 161 aa13.61□□□□□ -0.23
SMC6-210ENST00000621152 C11orf52Q96A22 123 aa13.61□□□□□ -0.23
SMC6-210ENST00000621152 KLK12Q9UKR0 248 aa13.61□□□□□ -0.23
SMC6-210ENST00000621152 A0A087WX48 190 aa13.6□□□□□ -0.23
SMC6-210ENST00000621152 RAB19A4D1S5 217 aa13.6□□□□□ -0.23
SMC6-210ENST00000621152 TMEM262E9PQX1 116 aa13.6□□□□□ -0.23
SMC6-210ENST00000621152 SMR3BP02814 79 aaPredicted RBP13.6□□□□□ -0.23
SMC6-210ENST00000621152 WFDC2Q14508 124 aa13.6□□□□□ -0.23
SMC6-210ENST00000621152 NEXN-AS1Q8NBZ9 246 aa13.6□□□□□ -0.23
SMC6-210ENST00000621152 OR10G8Q8NGN5 311 aa13.6□□□□□ -0.23
SMC6-210ENST00000621152 DAZAP1Q96EP5 407 aaKnown RBP13.6□□□□□ -0.23
SMC6-210ENST00000621152 LECT2O14960 151 aa13.59□□□□□ -0.23
SMC6-210ENST00000621152 CENPWQ5EE01 88 aa13.59□□□□□ -0.23
SMC6-210ENST00000621152 KCNIP4Q6PIL6 250 aa13.59□□□□□ -0.23
SMC6-210ENST00000621152 TCTE3Q8IZS6 198 aa13.59□□□□□ -0.23
SMC6-210ENST00000621152 BAALCQ8WXS3 180 aa13.59□□□□□ -0.23
SMC6-210ENST00000621152 DNAJC30Q96LL9 226 aa13.59□□□□□ -0.23
SMC6-210ENST00000621152 COX11Q9Y6N1 276 aa13.59□□□□□ -0.23
SMC6-210ENST00000621152 ELOBQ15370 118 aa13.58□□□□□ -0.24
SMC6-210ENST00000621152 FRZBQ92765 325 aa13.58□□□□□ -0.24
SMC6-210ENST00000621152 RMI2Q96E14 147 aa13.58□□□□□ -0.24
SMC6-210ENST00000621152 IGKV2D-24A0A075B6R9 120 aa13.57□□□□□ -0.24
SMC6-210ENST00000621152 IGLV2-8P01709 118 aa13.57□□□□□ -0.24
SMC6-210ENST00000621152 SMIM17P0DL12 118 aa13.57□□□□□ -0.24
SMC6-210ENST00000621152 GZMBP10144 247 aa13.57□□□□□ -0.24
SMC6-210ENST00000621152 HAMPP81172 84 aa13.57□□□□□ -0.24
SMC6-210ENST00000621152 OR2D3Q8NGH3 330 aa13.57□□□□□ -0.24
SMC6-210ENST00000621152 UBE2WQ96B02 151 aa13.57□□□□□ -0.24
SMC6-210ENST00000621152 TMEM70Q9BUB7 260 aa13.57□□□□□ -0.24
SMC6-210ENST00000621152 TRBV6-8A0A0A6YYG3 113 aa13.56□□□□□ -0.24
SMC6-210ENST00000621152 RBFOX3A6NFN3 312 aa13.56□□□□□ -0.24
SMC6-210ENST00000621152 GNG4P50150 75 aa13.56□□□□□ -0.24
SMC6-210ENST00000621152 MEF2BQ02080 365 aaPredicted RBP13.56□□□□□ -0.24
SMC6-210ENST00000621152 SLC51BQ86UW2 128 aa13.56□□□□□ -0.24
SMC6-210ENST00000621152 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.56□□□□□ -0.24
SMC6-210ENST00000621152 CHCHD7Q9BUK0 85 aa13.56□□□□□ -0.24
SMC6-210ENST00000621152 TPPP3Q9BW30 176 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms