RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 IGHV3OR16-10A0A075B7F0 116 aa14.66□□□□□ -0.06
PDLIM3-212ENST00000620787 AMELXQ99217 191 aa14.66□□□□□ -0.06
PDLIM3-212ENST00000620787 SLC25A29Q8N8R3 303 aa14.66□□□□□ -0.06
PDLIM3-212ENST00000620787 ZNRF2Q8NHG8 242 aa14.66□□□□□ -0.06
PDLIM3-212ENST00000620787 KLLNB2CW77 178 aa14.65□□□□□ -0.06
PDLIM3-212ENST00000620787 IGHV3-11P01762 117 aa14.65□□□□□ -0.06
PDLIM3-212ENST00000620787 VCYO14598 125 aa14.65□□□□□ -0.07
PDLIM3-212ENST00000620787 TEN1Q86WV5 123 aa14.65□□□□□ -0.07
PDLIM3-212ENST00000620787 SBSPONQ8IVN8 264 aa14.65□□□□□ -0.07
PDLIM3-212ENST00000620787 PPDPFLQ8WWR9 84 aa14.65□□□□□ -0.07
PDLIM3-212ENST00000620787 UBTD1Q9HAC8 227 aa14.65□□□□□ -0.07
PDLIM3-212ENST00000620787 A0A087WWL8 130 aa14.64□□□□□ -0.07
PDLIM3-212ENST00000620787 ZNF876PQ49A33 203 aa14.64□□□□□ -0.07
PDLIM3-212ENST00000620787 TMEM170BQ5T4T1 132 aa14.64□□□□□ -0.07
PDLIM3-212ENST00000620787 KIR2DL4Q99706 377 aa14.64□□□□□ -0.07
PDLIM3-212ENST00000620787 ABCA2Q9BZC7 2435 aa14.64□□□□□ -0.07
PDLIM3-212ENST00000620787 CRYBA4P53673 196 aa14.63□□□□□ -0.07
PDLIM3-212ENST00000620787 C10orf126Q8N4M7 172 aa14.63□□□□□ -0.07
PDLIM3-212ENST00000620787 RHPN1-AS1Q9BWJ2 59 aa14.63□□□□□ -0.07
PDLIM3-212ENST00000620787 TRBV20-1A0A075B6N2 111 aa14.62□□□□□ -0.07
PDLIM3-212ENST00000620787 SDHAF1A6NFY7 115 aa14.62□□□□□ -0.07
PDLIM3-212ENST00000620787 MT-ATP8P03928 68 aa14.62□□□□□ -0.07
PDLIM3-212ENST00000620787 FAM159AQ6UWV7 190 aa14.62□□□□□ -0.07
PDLIM3-212ENST00000620787 SPINK8P0C7L1 97 aa14.62□□□□□ -0.07
PDLIM3-212ENST00000620787 USMG5Q96IX5 58 aa14.62□□□□□ -0.07
PDLIM3-212ENST00000620787 TRBV27A0A0K0K1C4 114 aa14.61□□□□□ -0.07
PDLIM3-212ENST00000620787 Q6ZUT4 128 aa14.61□□□□□ -0.07
PDLIM3-212ENST00000620787 F5H697 171 aa14.61□□□□□ -0.07
PDLIM3-212ENST00000620787 J3QQQ9 107 aa14.61□□□□□ -0.07
PDLIM3-212ENST00000620787 XGP55808 180 aa14.61□□□□□ -0.07
PDLIM3-212ENST00000620787 BRD3OSQ6XYD6 125 aa14.61□□□□□ -0.07
PDLIM3-212ENST00000620787 LGALS9O00182 355 aa14.6□□□□□ -0.07
PDLIM3-212ENST00000620787 BRI3O95415 125 aa14.6□□□□□ -0.07
PDLIM3-212ENST00000620787 SRD5A1P18405 259 aa14.6□□□□□ -0.07
PDLIM3-212ENST00000620787 KLRB1Q12918 225 aa14.6□□□□□ -0.07
PDLIM3-212ENST00000620787 TRBV6-5A0A0K0K1A5 114 aa14.6□□□□□ -0.07
PDLIM3-212ENST00000620787 PRO1854Q9UHT4 67 aa14.6□□□□□ -0.07
PDLIM3-212ENST00000620787 A8MWV9 139 aa14.59□□□□□ -0.07
PDLIM3-212ENST00000620787 H3BUA1 57 aa14.59□□□□□ -0.07
PDLIM3-212ENST00000620787 TGFAP01135 160 aa14.59□□□□□ -0.07
PDLIM3-212ENST00000620787 IGHV1-69P01742 117 aa14.59□□□□□ -0.07
PDLIM3-212ENST00000620787 WFDC12Q8WWY7 111 aa14.59□□□□□ -0.07
PDLIM3-212ENST00000620787 EDN2P20800 178 aa14.59□□□□□ -0.07
PDLIM3-212ENST00000620787 LGALS3P17931 250 aaKnown RBP14.58□□□□□ -0.08
PDLIM3-212ENST00000620787 TRAV12-3A0A0B4J271 114 aa14.58□□□□□ -0.08
PDLIM3-212ENST00000620787 EIF4EBP3O60516 100 aaPredicted RBP14.58□□□□□ -0.08
PDLIM3-212ENST00000620787 IGHG2P01859 326 aa14.58□□□□□ -0.08
PDLIM3-212ENST00000620787 PF4V1P10720 104 aa14.58□□□□□ -0.08
PDLIM3-212ENST00000620787 ANKRD29Q8N6D5 301 aa14.58□□□□□ -0.08
PDLIM3-212ENST00000620787 GEMIN7Q9H840 131 aaKnown RBP14.58□□□□□ -0.08
PDLIM3-212ENST00000620787 LY6EQ16553 131 aa14.57□□□□□ -0.08
PDLIM3-212ENST00000620787 DAZ1Q9NQZ3 744 aaKnown RBP14.57□□□□□ -0.08
PDLIM3-212ENST00000620787 ZNF256Q9Y2P7 627 aaPredicted RBP14.57□□□□□ -0.08
PDLIM3-212ENST00000620787 FAM74A4Q5TZK3 123 aa14.56□□□□□ -0.08
PDLIM3-212ENST00000620787 OPRPNQ99935 248 aaPredicted RBP14.56□□□□□ -0.08
PDLIM3-212ENST00000620787 ATRXP46100 2492 aa14.56□□□□□ -0.08
PDLIM3-212ENST00000620787 CELSR1Q9NYQ6 3014 aa14.56□□□□□ -0.08
PDLIM3-212ENST00000620787 SCGB1C2P0DMR2 95 aa14.56□□□□□ -0.08
PDLIM3-212ENST00000620787 C9orf85Q96MD7 179 aa14.56□□□□□ -0.08
PDLIM3-212ENST00000620787 AKAP6Q13023 2319 aa14.56□□□□□ -0.08
PDLIM3-212ENST00000620787 TMEM223A0PJW6 202 aa14.55□□□□□ -0.08
PDLIM3-212ENST00000620787 LEPROTO15243 131 aa14.55□□□□□ -0.08
PDLIM3-212ENST00000620787 NSUN5P1Q3KNT7 163 aa14.55□□□□□ -0.08
PDLIM3-212ENST00000620787 DCANP1Q8TF63 244 aa14.55□□□□□ -0.08
PDLIM3-212ENST00000620787 CLUHP3Q96NS8 147 aa14.55□□□□□ -0.08
PDLIM3-212ENST00000620787 VCX2Q9H322 139 aa14.55□□□□□ -0.08
PDLIM3-212ENST00000620787 A4D1N5 150 aa14.55□□□□□ -0.08
PDLIM3-212ENST00000620787 ZNF688P0C7X2 276 aa14.55□□□□□ -0.08
PDLIM3-212ENST00000620787 TRAV26-1A0A087WT03 109 aa14.54□□□□□ -0.08
PDLIM3-212ENST00000620787 IGHV3-16A0A0C4DH30 117 aa14.54□□□□□ -0.08
PDLIM3-212ENST00000620787 M0QY20 66 aa14.54□□□□□ -0.08
PDLIM3-212ENST00000620787 ID1P41134 155 aa14.54□□□□□ -0.08
PDLIM3-212ENST00000620787 RHOHQ15669 191 aa14.54□□□□□ -0.08
PDLIM3-212ENST00000620787 TMEM263Q8WUH6 116 aaKnown RBP14.54□□□□□ -0.08
PDLIM3-212ENST00000620787 IGHV3-33P01772 117 aa14.53□□□□□ -0.08
PDLIM3-212ENST00000620787 IGLV1-40P01703 118 aa14.53□□□□□ -0.08
PDLIM3-212ENST00000620787 P0DMU3 169 aa14.53□□□□□ -0.08
PDLIM3-212ENST00000620787 FAM231AP0DMU4 169 aa14.53□□□□□ -0.08
PDLIM3-212ENST00000620787 FAM231CP0DMU5 169 aa14.53□□□□□ -0.08
PDLIM3-212ENST00000620787 ZNF56Q15929 161 aa14.53□□□□□ -0.08
PDLIM3-212ENST00000620787 RAX2Q96IS3 184 aa14.53□□□□□ -0.08
PDLIM3-212ENST00000620787 MDFICQ9P1T7 246 aa14.53□□□□□ -0.08
PDLIM3-212ENST00000620787 BLCAPP62952 87 aa14.52□□□□□ -0.08
PDLIM3-212ENST00000620787 COL6A6A6NMZ7 2263 aa14.52□□□□□ -0.09
PDLIM3-212ENST00000620787 HIVEP3Q5T1R4 2406 aa14.52□□□□□ -0.09
PDLIM3-212ENST00000620787 A6NDX4 124 aa14.52□□□□□ -0.09
PDLIM3-212ENST00000620787 ZNF22P17026 224 aaPredicted RBP14.52□□□□□ -0.09
PDLIM3-212ENST00000620787 H3BUX3 64 aa14.51□□□□□ -0.09
PDLIM3-212ENST00000620787 SLC25A20O43772 301 aa14.51□□□□□ -0.09
PDLIM3-212ENST00000620787 IGHV4-38-2P0DP08 117 aa14.51□□□□□ -0.09
PDLIM3-212ENST00000620787 A0A0B4J2C4 111 aa14.51□□□□□ -0.09
PDLIM3-212ENST00000620787 TRPT1Q86TN4 253 aaKnown RBP14.51□□□□□ -0.09
PDLIM3-212ENST00000620787 TRAV2A0A0B4J234 112 aa14.5□□□□□ -0.09
PDLIM3-212ENST00000620787 K7EMT4 169 aa14.5□□□□□ -0.09
PDLIM3-212ENST00000620787 M0QXV9 152 aa14.5□□□□□ -0.09
PDLIM3-212ENST00000620787 RHODO00212 210 aa14.5□□□□□ -0.09
PDLIM3-212ENST00000620787 IGHV4-39P01824 125 aa14.5□□□□□ -0.09
PDLIM3-212ENST00000620787 SPTAN1Q13813 2472 aaKnown RBP14.5□□□□□ -0.09
PDLIM3-212ENST00000620787 IGHV3-64A0A075B6Q5 118 aa14.49□□□□□ -0.09
PDLIM3-212ENST00000620787 C9JAW5 83 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms