RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 SDK2Q58EX2 2172 aa7.87□□□□□ -1.15
CUL4A-212ENST00000617546 NFE4Q86UQ8 179 aa7.86□□□□□ -1.15
CUL4A-212ENST00000617546 XCL2Q9UBD3 114 aa7.86□□□□□ -1.15
CUL4A-212ENST00000617546 SHANK1Q9Y566 2161 aa7.86□□□□□ -1.15
CUL4A-212ENST00000617546 SPRNQ5BIV9 151 aa7.86□□□□□ -1.15
CUL4A-212ENST00000617546 IGF2-ASQ6U949 168 aa7.86□□□□□ -1.15
CUL4A-212ENST00000617546 A0A0J9YX75 114 aa7.86□□□□□ -1.15
CUL4A-212ENST00000617546 RUSC1-AS1Q66K80 236 aa7.86□□□□□ -1.15
CUL4A-212ENST00000617546 FANCD2OSQ96PS1 177 aa7.86□□□□□ -1.15
CUL4A-212ENST00000617546 IGLV2-11P01706 119 aa7.86□□□□□ -1.15
CUL4A-212ENST00000617546 U3KQE9 123 aa7.86□□□□□ -1.15
CUL4A-212ENST00000617546 IGHV4-4A0A075B6R2 117 aa7.85□□□□□ -1.15
CUL4A-212ENST00000617546 IGHV3-30P01768 117 aa7.85□□□□□ -1.15
CUL4A-212ENST00000617546 IGHV3-30-5P0DP03 117 aa7.85□□□□□ -1.15
CUL4A-212ENST00000617546 ZNF80P51504 273 aaPredicted RBP7.85□□□□□ -1.15
CUL4A-212ENST00000617546 NKAPP1Q8N9T2 125 aa7.85□□□□□ -1.15
CUL4A-212ENST00000617546 CNFNQ9BYD5 112 aa7.85□□□□□ -1.15
CUL4A-212ENST00000617546 NDUFC1O43677 76 aa7.85□□□□□ -1.15
CUL4A-212ENST00000617546 SNRNP200O75643 2136 aaKnown RBP7.85□□□□□ -1.15
CUL4A-212ENST00000617546 TEX49A0A1B0GTD5 131 aa7.85□□□□□ -1.15
CUL4A-212ENST00000617546 RNASE13Q5GAN3 156 aaKnown RBP7.85□□□□□ -1.15
CUL4A-212ENST00000617546 TRBV10-1A0A0K0K1A3 114 aa7.85□□□□□ -1.15
CUL4A-212ENST00000617546 TRBV6-5A0A0K0K1A5 114 aa7.85□□□□□ -1.15
CUL4A-212ENST00000617546 GPHB5Q86YW7 130 aa7.85□□□□□ -1.15
CUL4A-212ENST00000617546 FAM236DA0A1B0GTK5 79 aa7.84□□□□□ -1.15
CUL4A-212ENST00000617546 FAM236CP0DP71 79 aa7.84□□□□□ -1.15
CUL4A-212ENST00000617546 HOXD3P31249 432 aaPredicted RBP7.84□□□□□ -1.15
CUL4A-212ENST00000617546 PI4KAP42356 2102 aa7.84□□□□□ -1.15
CUL4A-212ENST00000617546 FUSP35637 526 aaKnown RBP eCLIP7.84□□□□□ -1.15
CUL4A-212ENST00000617546 FAM222AQ5U5X8 452 aa7.84□□□□□ -1.15
CUL4A-212ENST00000617546 DAND5Q8N907 189 aa7.84□□□□□ -1.15
CUL4A-212ENST00000617546 NXPH4O95158 308 aa7.84□□□□□ -1.15
CUL4A-212ENST00000617546 RPL35AP18077 110 aaKnown RBP7.84□□□□□ -1.15
CUL4A-212ENST00000617546 DPH3Q96FX2 82 aa7.84□□□□□ -1.15
CUL4A-212ENST00000617546 PYGO1Q9Y3Y4 419 aa7.84□□□□□ -1.15
CUL4A-212ENST00000617546 DOCK8Q8NF50 2099 aa7.84□□□□□ -1.15
CUL4A-212ENST00000617546 EML6Q6ZMW3 1958 aa7.84□□□□□ -1.15
CUL4A-212ENST00000617546 XGP55808 180 aa7.84□□□□□ -1.15
CUL4A-212ENST00000617546 PLA2G2CQ5R387 149 aa7.84□□□□□ -1.15
CUL4A-212ENST00000617546 MAP1BP46821 2468 aaKnown RBP7.84□□□□□ -1.16
CUL4A-212ENST00000617546 TRAV4A0A0B4J268 109 aa7.83□□□□□ -1.16
CUL4A-212ENST00000617546 COX7CP15954 63 aa7.83□□□□□ -1.16
CUL4A-212ENST00000617546 CRIP1P50238 77 aa7.83□□□□□ -1.16
CUL4A-212ENST00000617546 SERP2Q8N6R1 65 aa7.83□□□□□ -1.16
CUL4A-212ENST00000617546 C16orf74Q96GX8 76 aa7.83□□□□□ -1.16
CUL4A-212ENST00000617546 C5orf56Q8N8D9 126 aa7.83□□□□□ -1.16
CUL4A-212ENST00000617546 NCKAP5O14513 1909 aa7.83□□□□□ -1.16
CUL4A-212ENST00000617546 ZMAT4Q9H898 229 aa7.83□□□□□ -1.16
CUL4A-212ENST00000617546 H7C423 109 aa7.83□□□□□ -1.16
CUL4A-212ENST00000617546 LECT2O14960 151 aa7.83□□□□□ -1.16
CUL4A-212ENST00000617546 ZNF22P17026 224 aaPredicted RBP7.83□□□□□ -1.16
CUL4A-212ENST00000617546 TIRAPP58753 221 aa7.83□□□□□ -1.16
CUL4A-212ENST00000617546 ESPL1Q14674 2120 aa7.83□□□□□ -1.16
CUL4A-212ENST00000617546 TRIAP1O43715 76 aa7.82□□□□□ -1.16
CUL4A-212ENST00000617546 YLPM1P49750 1951 aaKnown RBP7.82□□□□□ -1.16
CUL4A-212ENST00000617546 NDUFA1O15239 70 aa7.82□□□□□ -1.16
CUL4A-212ENST00000617546 LY6HO94772 140 aa7.82□□□□□ -1.16
CUL4A-212ENST00000617546 MED12Q93074 2177 aa7.82□□□□□ -1.16
CUL4A-212ENST00000617546 TRAV25A0A0B4J276 109 aa7.82□□□□□ -1.16
CUL4A-212ENST00000617546 LST1O00453 97 aa7.82□□□□□ -1.16
CUL4A-212ENST00000617546 URB1-AS1Q96HZ7 61 aa7.81□□□□□ -1.16
CUL4A-212ENST00000617546 FAM110AQ9BQ89 295 aa7.81□□□□□ -1.16
CUL4A-212ENST00000617546 SPRY4Q9C004 299 aa7.81□□□□□ -1.16
CUL4A-212ENST00000617546 ADAMTS9Q9P2N4 1935 aa7.81□□□□□ -1.16
CUL4A-212ENST00000617546 NRACQ8N912 160 aa7.81□□□□□ -1.16
CUL4A-212ENST00000617546 DEFB130BP0DP73 79 aa7.81□□□□□ -1.16
CUL4A-212ENST00000617546 DEFB130AP0DP74 79 aa7.81□□□□□ -1.16
CUL4A-212ENST00000617546 RPL18AQ02543 176 aaKnown RBP7.81□□□□□ -1.16
CUL4A-212ENST00000617546 NDUFC2-KCTD14E9PQ53 114 aa7.81□□□□□ -1.16
CUL4A-212ENST00000617546 MRPS36P82909 103 aaKnown RBP7.81□□□□□ -1.16
CUL4A-212ENST00000617546 AJUBAQ96IF1 538 aa7.81□□□□□ -1.16
CUL4A-212ENST00000617546 NUP210LQ5VU65 1888 aa7.81□□□□□ -1.16
CUL4A-212ENST00000617546 MRPS12O15235 138 aaKnown RBP7.81□□□□□ -1.16
CUL4A-212ENST00000617546 MP68P56378 58 aa7.81□□□□□ -1.16
CUL4A-212ENST00000617546 TRBV27A0A0K0K1C4 114 aa7.8□□□□□ -1.16
CUL4A-212ENST00000617546 RS1O15537 224 aa7.8□□□□□ -1.16
CUL4A-212ENST00000617546 K7ENP7 123 aa7.8□□□□□ -1.16
CUL4A-212ENST00000617546 DAD1P61803 113 aa7.8□□□□□ -1.16
CUL4A-212ENST00000617546 IGHV4OR15-8A0A075B7B6 117 aa7.8□□□□□ -1.16
CUL4A-212ENST00000617546 A0A087WW49 117 aa7.8□□□□□ -1.16
CUL4A-212ENST00000617546 ODF3BA8MYP8 253 aa7.8□□□□□ -1.16
CUL4A-212ENST00000617546 NREPQ16612 68 aa7.8□□□□□ -1.16
CUL4A-212ENST00000617546 LTBP2Q14767 1821 aa7.8□□□□□ -1.16
CUL4A-212ENST00000617546 COX8CQ7Z4L0 72 aa7.79□□□□□ -1.16
CUL4A-212ENST00000617546 TMEM263Q8WUH6 116 aaKnown RBP7.79□□□□□ -1.16
CUL4A-212ENST00000617546 CLUHP3Q96NS8 147 aa7.79□□□□□ -1.16
CUL4A-212ENST00000617546 RMI2Q96E14 147 aa7.79□□□□□ -1.16
CUL4A-212ENST00000617546 UPK3BQ9BT76 320 aa7.79□□□□□ -1.16
CUL4A-212ENST00000617546 RP1L1Q8IWN7 2480 aaPredicted RBP7.79□□□□□ -1.16
CUL4A-212ENST00000617546 APOC4P55056 127 aa7.79□□□□□ -1.16
CUL4A-212ENST00000617546 HHLA3Q9XRX5 114 aa7.79□□□□□ -1.16
CUL4A-212ENST00000617546 HEATR1Q9H583 2144 aaKnown RBP7.79□□□□□ -1.16
CUL4A-212ENST00000617546 AHCTF1Q8WYP5 2266 aa7.79□□□□□ -1.16
CUL4A-212ENST00000617546 IGLV4-3A0A075B6K6 122 aa7.78□□□□□ -1.16
CUL4A-212ENST00000617546 CCDC179H3BU77 68 aa7.78□□□□□ -1.16
CUL4A-212ENST00000617546 MIR7-3HGQ8N6C7 128 aa7.78□□□□□ -1.16
CUL4A-212ENST00000617546 FER1L5A0AVI2 2057 aa7.78□□□□□ -1.16
CUL4A-212ENST00000617546 UBE2D1P51668 147 aa7.78□□□□□ -1.16
CUL4A-212ENST00000617546 UBE2D3P61077 147 aa7.78□□□□□ -1.16
CUL4A-212ENST00000617546 UBE2D2P62837 147 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms