RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 JMJD8Q96S16 334 aa10.47□□□□□ -0.73
PCDHGA3-202ENST00000612467 KIF25-AS1Q9Y6Z4 181 aa10.47□□□□□ -0.73
PCDHGA3-202ENST00000612467 KNCNA6PVL3 124 aa10.47□□□□□ -0.73
PCDHGA3-202ENST00000612467 KHDC1LQ5JSQ8 128 aa10.47□□□□□ -0.73
PCDHGA3-202ENST00000612467 C11orf44Q8N8P7 122 aa10.47□□□□□ -0.73
PCDHGA3-202ENST00000612467 SCGB3A1Q96QR1 104 aa10.47□□□□□ -0.73
PCDHGA3-202ENST00000612467 A0A0J9YX75 114 aa10.46□□□□□ -0.73
PCDHGA3-202ENST00000612467 K7EQG2 157 aa10.46□□□□□ -0.73
PCDHGA3-202ENST00000612467 SUMO4Q6EEV6 95 aa10.46□□□□□ -0.73
PCDHGA3-202ENST00000612467 K7ERJ3 54 aa10.46□□□□□ -0.74
PCDHGA3-202ENST00000612467 ATP5LO75964 103 aa10.46□□□□□ -0.74
PCDHGA3-202ENST00000612467 LGALS1P09382 135 aaKnown RBP10.46□□□□□ -0.74
PCDHGA3-202ENST00000612467 C2orf66Q6UXQ4 117 aa10.46□□□□□ -0.74
PCDHGA3-202ENST00000612467 Q8N1Y9 231 aa10.46□□□□□ -0.74
PCDHGA3-202ENST00000612467 JMJD1CQ15652 2540 aa10.46□□□□□ -0.74
PCDHGA3-202ENST00000612467 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.45□□□□□ -0.74
PCDHGA3-202ENST00000612467 DUSP14O95147 198 aaKnown RBP10.45□□□□□ -0.74
PCDHGA3-202ENST00000612467 GCSHP23434 173 aa10.45□□□□□ -0.74
PCDHGA3-202ENST00000612467 FXYD2P54710 66 aa10.45□□□□□ -0.74
PCDHGA3-202ENST00000612467 RPL39P62891 51 aaKnown RBP10.45□□□□□ -0.74
PCDHGA3-202ENST00000612467 ZNF580Q9UK33 172 aa10.45□□□□□ -0.74
PCDHGA3-202ENST00000612467 ITPR2Q14571 2701 aa10.45□□□□□ -0.74
PCDHGA3-202ENST00000612467 A0A087WX48 190 aa10.45□□□□□ -0.74
PCDHGA3-202ENST00000612467 TMEM238LA0A1B0GVL6 79 aa10.45□□□□□ -0.74
PCDHGA3-202ENST00000612467 FSHBP01225 129 aa10.45□□□□□ -0.74
PCDHGA3-202ENST00000612467 RBMY1A1P0DJD3 496 aaKnown RBP10.45□□□□□ -0.74
PCDHGA3-202ENST00000612467 RBMY1CP0DJD4 496 aa10.45□□□□□ -0.74
PCDHGA3-202ENST00000612467 RBMY1FQ15415 496 aaKnown RBP10.45□□□□□ -0.74
PCDHGA3-202ENST00000612467 TCTEX1D4Q5JR98 221 aa10.45□□□□□ -0.74
PCDHGA3-202ENST00000612467 H3BUT2 72 aa10.44□□□□□ -0.74
PCDHGA3-202ENST00000612467 TRBV25-1A0A075B6N4 114 aa10.44□□□□□ -0.74
PCDHGA3-202ENST00000612467 DEFB113Q30KQ7 82 aa10.44□□□□□ -0.74
PCDHGA3-202ENST00000612467 J3QLI3 93 aa10.43□□□□□ -0.74
PCDHGA3-202ENST00000612467 SNRPD3P62318 126 aaKnown RBP10.43□□□□□ -0.74
PCDHGA3-202ENST00000612467 HSD52Q0P140 79 aa10.43□□□□□ -0.74
PCDHGA3-202ENST00000612467 IGHV3-73A0A0B4J1V6 119 aa10.43□□□□□ -0.74
PCDHGA3-202ENST00000612467 IGHV3-16A0A0C4DH30 117 aa10.43□□□□□ -0.74
PCDHGA3-202ENST00000612467 GAGE12BA1L429 117 aa10.43□□□□□ -0.74
PCDHGA3-202ENST00000612467 OR9G4Q8NGQ1 327 aa10.43□□□□□ -0.74
PCDHGA3-202ENST00000612467 BAALCQ8WXS3 180 aa10.43□□□□□ -0.74
PCDHGA3-202ENST00000612467 TOMM6Q96B49 74 aa10.43□□□□□ -0.74
PCDHGA3-202ENST00000612467 CHAC1Q9BUX1 264 aa10.43□□□□□ -0.74
PCDHGA3-202ENST00000612467 ZNF256Q9Y2P7 627 aaPredicted RBP10.43□□□□□ -0.74
PCDHGA3-202ENST00000612467 KRTAP1-3Q8IUG1 177 aa10.42□□□□□ -0.74
PCDHGA3-202ENST00000612467 C20orf78Q9BR46 151 aa10.42□□□□□ -0.74
PCDHGA3-202ENST00000612467 CHTOPQ9Y3Y2 248 aaKnown RBP10.42□□□□□ -0.74
PCDHGA3-202ENST00000612467 DEFB131AP59861 70 aa10.42□□□□□ -0.74
PCDHGA3-202ENST00000612467 ORMDL2Q53FV1 153 aa10.42□□□□□ -0.74
PCDHGA3-202ENST00000612467 NEXN-AS1Q8NBZ9 246 aa10.42□□□□□ -0.74
PCDHGA3-202ENST00000612467 OR11H1Q8NG94 326 aa10.42□□□□□ -0.74
PCDHGA3-202ENST00000612467 PRSS29PA6NIE9 313 aa10.41□□□□□ -0.74
PCDHGA3-202ENST00000612467 NXPH4O95158 308 aa10.41□□□□□ -0.74
PCDHGA3-202ENST00000612467 TSHBP01222 138 aa10.41□□□□□ -0.74
PCDHGA3-202ENST00000612467 MED14OSP0DP75 135 aa10.41□□□□□ -0.74
PCDHGA3-202ENST00000612467 SEC11AP67812 179 aa10.41□□□□□ -0.74
PCDHGA3-202ENST00000612467 ZNF56Q15929 161 aa10.41□□□□□ -0.74
PCDHGA3-202ENST00000612467 MORN3Q6PF18 240 aaPredicted RBP10.41□□□□□ -0.74
PCDHGA3-202ENST00000612467 WFDC11Q8NEX6 87 aa10.41□□□□□ -0.74
PCDHGA3-202ENST00000612467 UBE2E2Q96LR5 201 aa10.41□□□□□ -0.74
PCDHGA3-202ENST00000612467 OPRPNQ99935 248 aaPredicted RBP10.41□□□□□ -0.74
PCDHGA3-202ENST00000612467 TP53TG1Q9Y2A0 90 aa10.41□□□□□ -0.74
PCDHGA3-202ENST00000612467 NACAE9PAV3 2078 aa10.41□□□□□ -0.74
PCDHGA3-202ENST00000612467 F8VRH5 84 aa10.4□□□□□ -0.74
PCDHGA3-202ENST00000612467 ELANEP08246 267 aa10.4□□□□□ -0.74
PCDHGA3-202ENST00000612467 PROK1P58294 105 aa10.4□□□□□ -0.74
PCDHGA3-202ENST00000612467 TRBV7-9A0A0J9YWB2 115 aa10.4□□□□□ -0.75
PCDHGA3-202ENST00000612467 RBMY1BA6NDE4 496 aaKnown RBP10.4□□□□□ -0.75
PCDHGA3-202ENST00000612467 RBMY1EA6NEQ0 496 aaKnown RBP10.4□□□□□ -0.75
PCDHGA3-202ENST00000612467 SDHAF1A6NFY7 115 aa10.4□□□□□ -0.75
PCDHGA3-202ENST00000612467 RBMY1DP0C7P1 496 aaKnown RBP10.4□□□□□ -0.75
PCDHGA3-202ENST00000612467 AMTNQ6UX39 209 aa10.4□□□□□ -0.75
PCDHGA3-202ENST00000612467 Q9UF83 564 aa10.4□□□□□ -0.75
PCDHGA3-202ENST00000612467 IGHV1OR15-1A0A075B7D0 117 aa10.39□□□□□ -0.75
PCDHGA3-202ENST00000612467 H7C1H1 209 aa10.39□□□□□ -0.75
PCDHGA3-202ENST00000612467 CRYGDP07320 174 aa10.39□□□□□ -0.75
PCDHGA3-202ENST00000612467 P0DMU3 169 aa10.39□□□□□ -0.75
PCDHGA3-202ENST00000612467 FAM231AP0DMU4 169 aa10.39□□□□□ -0.75
PCDHGA3-202ENST00000612467 FAM231CP0DMU5 169 aa10.39□□□□□ -0.75
PCDHGA3-202ENST00000612467 TMEM61Q8N0U2 210 aa10.39□□□□□ -0.75
PCDHGA3-202ENST00000612467 C9orf85Q96MD7 179 aa10.39□□□□□ -0.75
PCDHGA3-202ENST00000612467 A0A1W2PRX2 142 aa10.39□□□□□ -0.75
PCDHGA3-202ENST00000612467 SIVA1O15304 175 aa10.39□□□□□ -0.75
PCDHGA3-202ENST00000612467 ZFP2Q6ZN57 461 aa10.39□□□□□ -0.75
PCDHGA3-202ENST00000612467 HELZ2Q9BYK8 2649 aaKnown RBP10.38□□□□□ -0.75
PCDHGA3-202ENST00000612467 POLR2KP53803 58 aaKnown RBP10.38□□□□□ -0.75
PCDHGA3-202ENST00000612467 ZNF876PQ49A33 203 aa10.38□□□□□ -0.75
PCDHGA3-202ENST00000612467 DLX4Q92988 240 aaPredicted RBP10.38□□□□□ -0.75
PCDHGA3-202ENST00000612467 NHP2Q9NX24 153 aaKnown RBP10.38□□□□□ -0.75
PCDHGA3-202ENST00000612467 SETXQ7Z333 2677 aaKnown RBP10.38□□□□□ -0.75
PCDHGA3-202ENST00000612467 A6NDN8 102 aa10.38□□□□□ -0.75
PCDHGA3-202ENST00000612467 C9orf118A6NHY6 69 aa10.38□□□□□ -0.75
PCDHGA3-202ENST00000612467 HLA-DRB4P13762 266 aa10.38□□□□□ -0.75
PCDHGA3-202ENST00000612467 HLA-DRB4X5D2U9 266 aa10.38□□□□□ -0.75
PCDHGA3-202ENST00000612467 H3BRM9 83 aa10.37□□□□□ -0.75
PCDHGA3-202ENST00000612467 CD300EQ496F6 205 aaPredicted RBP10.37□□□□□ -0.75
PCDHGA3-202ENST00000612467 KLHL30-AS1Q8NEE0 82 aa10.37□□□□□ -0.75
PCDHGA3-202ENST00000612467 TMEM89A2RUT3 159 aa10.37□□□□□ -0.75
PCDHGA3-202ENST00000612467 LGALS9O00182 355 aa10.37□□□□□ -0.75
PCDHGA3-202ENST00000612467 POM121L12Q8N7R1 296 aa10.37□□□□□ -0.75
PCDHGA3-202ENST00000612467 PLNP26678 52 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms