RNA–Protein interactions for RNA: ENST00000603043.1

CDCA3-211, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 1,995 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-211ENST00000603043 IBA57Q5T440 356 aaKnown RBP11.1□□□□□ -0.63
CDCA3-211ENST00000603043 Q6ZTC4 211 aa11.1□□□□□ -0.63
CDCA3-211ENST00000603043 COX8CQ7Z4L0 72 aa11.1□□□□□ -0.63
CDCA3-211ENST00000603043 BAGE3Q86Y29 109 aa11.1□□□□□ -0.63
CDCA3-211ENST00000603043 BAGE2Q86Y30 109 aa11.1□□□□□ -0.63
CDCA3-211ENST00000603043 NHLRC2Q8NBF2 726 aa11.1□□□□□ -0.63
CDCA3-211ENST00000603043 ZC2HC1AQ96GY0 325 aa11.1□□□□□ -0.63
CDCA3-211ENST00000603043 CIDEAO60543 219 aa11.1□□□□□ -0.63
CDCA3-211ENST00000603043 Q8N976 141 aa11.1□□□□□ -0.63
CDCA3-211ENST00000603043 SFRP2Q96HF1 295 aa11.1□□□□□ -0.63
CDCA3-211ENST00000603043 TRGV11A0A075B6L2 103 aa11.09□□□□□ -0.63
CDCA3-211ENST00000603043 GRIFINA4D1Z8 144 aa11.09□□□□□ -0.63
CDCA3-211ENST00000603043 HSBP1L1C9JCN9 74 aa11.09□□□□□ -0.63
CDCA3-211ENST00000603043 RPL19P84098 196 aaKnown RBP11.09□□□□□ -0.63
CDCA3-211ENST00000603043 RNF151Q2KHN1 245 aa11.09□□□□□ -0.63
CDCA3-211ENST00000603043 PHLDA1Q8WV24 401 aaPredicted RBP11.09□□□□□ -0.63
CDCA3-211ENST00000603043 KCNS1Q96KK3 526 aa11.09□□□□□ -0.63
CDCA3-211ENST00000603043 MRPL18Q9H0U6 180 aaKnown RBP11.09□□□□□ -0.63
CDCA3-211ENST00000603043 NUPR2A6NF83 97 aa11.08□□□□□ -0.64
CDCA3-211ENST00000603043 FABP5P3A8MUU1 101 aa11.08□□□□□ -0.64
CDCA3-211ENST00000603043 DEFB130BP0DP73 79 aa11.08□□□□□ -0.64
CDCA3-211ENST00000603043 DEFB130AP0DP74 79 aa11.08□□□□□ -0.64
CDCA3-211ENST00000603043 TCL1AP56279 114 aa11.08□□□□□ -0.64
CDCA3-211ENST00000603043 DAD1P61803 113 aa11.08□□□□□ -0.64
CDCA3-211ENST00000603043 ZNF415Q09FC8 603 aa11.08□□□□□ -0.64
CDCA3-211ENST00000603043 DAZ2Q13117 558 aaKnown RBP11.08□□□□□ -0.64
CDCA3-211ENST00000603043 COX19Q49B96 90 aa11.08□□□□□ -0.64
CDCA3-211ENST00000603043 FAM162BQ5T6X4 162 aa11.08□□□□□ -0.64
CDCA3-211ENST00000603043 C11orf21Q9P2W6 132 aa11.08□□□□□ -0.64
CDCA3-211ENST00000603043 CRIP1P50238 77 aa11.08□□□□□ -0.64
CDCA3-211ENST00000603043 KRTDAPP60985 99 aa11.08□□□□□ -0.64
CDCA3-211ENST00000603043 OR10J3Q5JRS4 329 aa11.08□□□□□ -0.64
CDCA3-211ENST00000603043 VPS25Q9BRG1 176 aa11.08□□□□□ -0.64
CDCA3-211ENST00000603043 TMEM238LA0A1B0GVL6 79 aa11.07□□□□□ -0.64
CDCA3-211ENST00000603043 CENPWQ5EE01 88 aa11.07□□□□□ -0.64
CDCA3-211ENST00000603043 MLST8Q9BVC4 326 aa11.07□□□□□ -0.64
CDCA3-211ENST00000603043 MDFICQ9P1T7 246 aa11.07□□□□□ -0.64
CDCA3-211ENST00000603043 TENM2Q9NT68 2774 aa11.07□□□□□ -0.64
CDCA3-211ENST00000603043 GNRH2O43555 120 aa11.07□□□□□ -0.64
CDCA3-211ENST00000603043 SH2D1AO60880 128 aa11.07□□□□□ -0.64
CDCA3-211ENST00000603043 MT-ND6P03923 174 aa11.07□□□□□ -0.64
CDCA3-211ENST00000603043 PMCHL1Q16048 86 aa11.07□□□□□ -0.64
CDCA3-211ENST00000603043 CEMP1Q6PRD7 247 aaPredicted RBP11.07□□□□□ -0.64
CDCA3-211ENST00000603043 OR10G8Q8NGN5 311 aa11.07□□□□□ -0.64
CDCA3-211ENST00000603043 IL36BQ9NZH7 164 aa11.07□□□□□ -0.64
CDCA3-211ENST00000603043 TRAV10A0A0B4J240 114 aa11.06□□□□□ -0.64
CDCA3-211ENST00000603043 GNG4P50150 75 aa11.06□□□□□ -0.64
CDCA3-211ENST00000603043 IGHV3-16A0A0C4DH30 117 aa11.05□□□□□ -0.64
CDCA3-211ENST00000603043 Q6ZTI0 123 aa11.05□□□□□ -0.64
CDCA3-211ENST00000603043 SMIM12Q96EX1 92 aa11.05□□□□□ -0.64
CDCA3-211ENST00000603043 GNB1LQ9BYB4 327 aa11.05□□□□□ -0.64
CDCA3-211ENST00000603043 STARD9Q9P2P6 4700 aa11.05□□□□□ -0.64
CDCA3-211ENST00000603043 TRBV20OR9-2A0A075B6H5 130 aa11.05□□□□□ -0.64
CDCA3-211ENST00000603043 DEFB131BA0A096LNP1 70 aa11.05□□□□□ -0.64
CDCA3-211ENST00000603043 IGKV3D-20A0A0C4DH25 116 aa11.05□□□□□ -0.64
CDCA3-211ENST00000603043 ORM1P02763 201 aa11.05□□□□□ -0.64
CDCA3-211ENST00000603043 WDR73Q6P4I2 378 aa11.05□□□□□ -0.64
CDCA3-211ENST00000603043 LINC00612Q8N6U2 182 aa11.05□□□□□ -0.64
CDCA3-211ENST00000603043 KLK5Q9Y337 293 aaPredicted RBP11.05□□□□□ -0.64
CDCA3-211ENST00000603043 TRGV1A0A0A0MS02 117 aa11.04□□□□□ -0.64
CDCA3-211ENST00000603043 GAGE12BA1L429 117 aa11.04□□□□□ -0.64
CDCA3-211ENST00000603043 SPINK4O60575 86 aa11.04□□□□□ -0.64
CDCA3-211ENST00000603043 GAGE7O76087 117 aa11.04□□□□□ -0.64
CDCA3-211ENST00000603043 GAGE12FP0CL80 117 aa11.04□□□□□ -0.64
CDCA3-211ENST00000603043 GAGE12GP0CL81 117 aa11.04□□□□□ -0.64
CDCA3-211ENST00000603043 GAGE12IP0CL82 117 aa11.04□□□□□ -0.64
CDCA3-211ENST00000603043 PRR27Q6MZM9 219 aa11.04□□□□□ -0.64
CDCA3-211ENST00000603043 IGLV2-8P01709 118 aa11.03□□□□□ -0.64
CDCA3-211ENST00000603043 HTN3P15516 51 aa11.03□□□□□ -0.64
CDCA3-211ENST00000603043 HINT1P49773 126 aaPredicted RBP11.03□□□□□ -0.64
CDCA3-211ENST00000603043 OCIAD2Q56VL3 154 aa11.03□□□□□ -0.64
CDCA3-211ENST00000603043 SPXQ9BT56 116 aa11.03□□□□□ -0.64
CDCA3-211ENST00000603043 CST9LQ9H4G1 147 aa11.03□□□□□ -0.64
CDCA3-211ENST00000603043 LY96Q9Y6Y9 160 aa11.03□□□□□ -0.64
CDCA3-211ENST00000603043 MGST1P10620 155 aaKnown RBP11.03□□□□□ -0.64
CDCA3-211ENST00000603043 AMTP48728 403 aa11.03□□□□□ -0.64
CDCA3-211ENST00000603043 LGALS9BQ3B8N2 356 aa11.03□□□□□ -0.64
CDCA3-211ENST00000603043 MRPL16Q9NX20 251 aaKnown RBP11.03□□□□□ -0.64
CDCA3-211ENST00000603043 PGPEP1LA6NFU8 196 aa11.02□□□□□ -0.65
CDCA3-211ENST00000603043 K7ERU9 68 aa11.02□□□□□ -0.65
CDCA3-211ENST00000603043 ATP5G1P05496 136 aa11.02□□□□□ -0.65
CDCA3-211ENST00000603043 LINC01559Q495D7 138 aa11.02□□□□□ -0.65
CDCA3-211ENST00000603043 TRGV2A0A075B6R0 118 aa11.01□□□□□ -0.65
CDCA3-211ENST00000603043 C9JCJ5 164 aa11.01□□□□□ -0.65
CDCA3-211ENST00000603043 TMEM238C9JI98 176 aa11.01□□□□□ -0.65
CDCA3-211ENST00000603043 VAMP3Q15836 100 aa11.01□□□□□ -0.65
CDCA3-211ENST00000603043 PET117Q6UWS5 81 aa11.01□□□□□ -0.65
CDCA3-211ENST00000603043 MUC4Q99102 2169 aa11.01□□□□□ -0.65
CDCA3-211ENST00000603043 S100A4P26447 101 aaKnown RBP11.01□□□□□ -0.65
CDCA3-211ENST00000603043 ASIPP42127 132 aa11.01□□□□□ -0.65
CDCA3-211ENST00000603043 BORCS7Q96B45 105 aa11.01□□□□□ -0.65
CDCA3-211ENST00000603043 TMSB15BA0A087X1C1 80 aa11□□□□□ -0.65
CDCA3-211ENST00000603043 IGLL5B9A064 214 aa11□□□□□ -0.65
CDCA3-211ENST00000603043 M0R2P5 195 aa11□□□□□ -0.65
CDCA3-211ENST00000603043 C3orf79P0CE67 100 aa11□□□□□ -0.65
CDCA3-211ENST00000603043 RNASE3P12724 160 aaKnown RBP11□□□□□ -0.65
CDCA3-211ENST00000603043 NUDT11Q96G61 164 aa11□□□□□ -0.65
CDCA3-211ENST00000603043 C9orf85Q96MD7 179 aa11□□□□□ -0.65
CDCA3-211ENST00000603043 TRAV9-2A0A087WT02 112 aa10.99□□□□□ -0.65
CDCA3-211ENST00000603043 RASL10AQ92737 203 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms