RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 DEFB4AO15263 64 aa13.28□□□□□ -0.28
SSBP4-212ENST00000601919 CIDEAO60543 219 aa13.28□□□□□ -0.28
SSBP4-212ENST00000601919 GAGE7O76087 117 aa13.28□□□□□ -0.28
SSBP4-212ENST00000601919 NHLRC4P0CG21 123 aaPredicted RBP13.28□□□□□ -0.28
SSBP4-212ENST00000601919 GAGE12FP0CL80 117 aa13.28□□□□□ -0.28
SSBP4-212ENST00000601919 GAGE12GP0CL81 117 aa13.28□□□□□ -0.28
SSBP4-212ENST00000601919 GAGE12IP0CL82 117 aa13.28□□□□□ -0.28
SSBP4-212ENST00000601919 FABP9Q0Z7S8 132 aa13.28□□□□□ -0.28
SSBP4-212ENST00000601919 LINC00612Q8N6U2 182 aa13.28□□□□□ -0.28
SSBP4-212ENST00000601919 OR4C5Q8NGB2 326 aa13.28□□□□□ -0.28
SSBP4-212ENST00000601919 NBEAL2Q6ZNJ1 2754 aa13.28□□□□□ -0.28
SSBP4-212ENST00000601919 TRAV4A0A0B4J268 109 aa13.27□□□□□ -0.29
SSBP4-212ENST00000601919 RS1O15537 224 aa13.27□□□□□ -0.29
SSBP4-212ENST00000601919 FAM74A4Q5TZK3 123 aa13.27□□□□□ -0.29
SSBP4-212ENST00000601919 CFAP126Q5VTH2 177 aa13.27□□□□□ -0.29
SSBP4-212ENST00000601919 AMN1Q8IY45 258 aa13.27□□□□□ -0.29
SSBP4-212ENST00000601919 A0A087WWL8 130 aa13.26□□□□□ -0.29
SSBP4-212ENST00000601919 CRYGDP07320 174 aa13.26□□□□□ -0.29
SSBP4-212ENST00000601919 MGPP08493 103 aa13.26□□□□□ -0.29
SSBP4-212ENST00000601919 ZFP2Q6ZN57 461 aa13.26□□□□□ -0.29
SSBP4-212ENST00000601919 C18orf15Q96N68 181 aa13.26□□□□□ -0.29
SSBP4-212ENST00000601919 JPT2Q9H910 190 aa13.26□□□□□ -0.29
SSBP4-212ENST00000601919 KIF25-AS1Q9Y6Z4 181 aa13.26□□□□□ -0.29
SSBP4-212ENST00000601919 F5H697 171 aa13.25□□□□□ -0.29
SSBP4-212ENST00000601919 PPBPP02775 128 aa13.25□□□□□ -0.29
SSBP4-212ENST00000601919 TRGC2P03986 189 aa13.25□□□□□ -0.29
SSBP4-212ENST00000601919 DEFB130BP0DP73 79 aa13.25□□□□□ -0.29
SSBP4-212ENST00000601919 DEFB130AP0DP74 79 aa13.25□□□□□ -0.29
SSBP4-212ENST00000601919 RAB4AP20338 218 aa13.25□□□□□ -0.29
SSBP4-212ENST00000601919 DAD1P61803 113 aa13.25□□□□□ -0.29
SSBP4-212ENST00000601919 SLAQ13239 276 aa13.25□□□□□ -0.29
SSBP4-212ENST00000601919 MRAP2Q96G30 205 aa13.25□□□□□ -0.29
SSBP4-212ENST00000601919 ZNF56Q15929 161 aa13.24□□□□□ -0.29
SSBP4-212ENST00000601919 RNF185Q96GF1 192 aa13.24□□□□□ -0.29
SSBP4-212ENST00000601919 SAMD10Q9BYL1 202 aa13.24□□□□□ -0.29
SSBP4-212ENST00000601919 C1orf196B1AJZ1 125 aa13.23□□□□□ -0.29
SSBP4-212ENST00000601919 CKS2P33552 79 aa13.23□□□□□ -0.29
SSBP4-212ENST00000601919 MRPL51Q4U2R6 128 aaKnown RBP13.23□□□□□ -0.29
SSBP4-212ENST00000601919 POM121L12Q8N7R1 296 aa13.23□□□□□ -0.29
SSBP4-212ENST00000601919 NACAE9PAV3 2078 aa13.23□□□□□ -0.29
SSBP4-212ENST00000601919 A0A0J9YWU9 116 aa13.22□□□□□ -0.29
SSBP4-212ENST00000601919 H7C1H1 209 aa13.22□□□□□ -0.29
SSBP4-212ENST00000601919 LINC00315P59091 139 aa13.22□□□□□ -0.29
SSBP4-212ENST00000601919 UFSP1Q6NVU6 142 aa13.22□□□□□ -0.29
SSBP4-212ENST00000601919 ORMDL3Q8N138 153 aa13.22□□□□□ -0.29
SSBP4-212ENST00000601919 PPP1R17O96001 155 aa13.21□□□□□ -0.29
SSBP4-212ENST00000601919 KIAA1644Q3SXP7 199 aa13.21□□□□□ -0.29
SSBP4-212ENST00000601919 CELA1Q9UNI1 258 aa13.21□□□□□ -0.29
SSBP4-212ENST00000601919 TRGV4A0A0C4DH28 118 aa13.2□□□□□ -0.3
SSBP4-212ENST00000601919 IGHV3-53P01767 116 aa13.2□□□□□ -0.3
SSBP4-212ENST00000601919 ZNF479Q96JC4 524 aa13.2□□□□□ -0.3
SSBP4-212ENST00000601919 LAMTOR2Q9Y2Q5 125 aa13.2□□□□□ -0.3
SSBP4-212ENST00000601919 IGHV3-73A0A0B4J1V6 119 aa13.19□□□□□ -0.3
SSBP4-212ENST00000601919 D6R8Y8 96 aa13.19□□□□□ -0.3
SSBP4-212ENST00000601919 U3KQK5 164 aa13.19□□□□□ -0.3
SSBP4-212ENST00000601919 ATP5G1P05496 136 aa13.18□□□□□ -0.3
SSBP4-212ENST00000601919 RAB5BP61020 215 aa13.18□□□□□ -0.3
SSBP4-212ENST00000601919 SUMO4Q6EEV6 95 aa13.18□□□□□ -0.3
SSBP4-212ENST00000601919 C11orf45Q8TAV5 145 aa13.18□□□□□ -0.3
SSBP4-212ENST00000601919 PRELID3AQ96N28 172 aa13.18□□□□□ -0.3
SSBP4-212ENST00000601919 EDA2RQ9HAV5 297 aa13.18□□□□□ -0.3
SSBP4-212ENST00000601919 PHOX2AO14813 284 aa13.17□□□□□ -0.3
SSBP4-212ENST00000601919 SRIP30626 198 aa13.17□□□□□ -0.3
SSBP4-212ENST00000601919 ALKBH7Q9BT30 221 aaPredicted RBP13.17□□□□□ -0.3
SSBP4-212ENST00000601919 TRAV26-2A0A0B4J265 109 aa13.16□□□□□ -0.3
SSBP4-212ENST00000601919 NCR2O95944 276 aa13.16□□□□□ -0.3
SSBP4-212ENST00000601919 C12orf74Q32Q52 190 aa13.16□□□□□ -0.3
SSBP4-212ENST00000601919 TRBV6-4A0A1B0GX49 114 aa13.15□□□□□ -0.3
SSBP4-212ENST00000601919 SMKR1H3BMG3 65 aa13.15□□□□□ -0.3
SSBP4-212ENST00000601919 M0QY20 66 aa13.15□□□□□ -0.3
SSBP4-212ENST00000601919 GATA1P15976 413 aaPredicted RBP13.15□□□□□ -0.3
SSBP4-212ENST00000601919 FHL2Q14192 279 aa13.15□□□□□ -0.3
SSBP4-212ENST00000601919 OR10J3Q5JRS4 329 aa13.15□□□□□ -0.3
SSBP4-212ENST00000601919 TRBV10-1A0A0K0K1A3 114 aa13.14□□□□□ -0.31
SSBP4-212ENST00000601919 TNFRSF6BO95407 300 aa13.14□□□□□ -0.31
SSBP4-212ENST00000601919 PRADC1Q9BSG0 188 aa13.14□□□□□ -0.31
SSBP4-212ENST00000601919 NIT2Q9NQR4 276 aa13.14□□□□□ -0.31
SSBP4-212ENST00000601919 HHLA3Q9XRX5 114 aa13.14□□□□□ -0.31
SSBP4-212ENST00000601919 K7EQD1 137 aa13.13□□□□□ -0.31
SSBP4-212ENST00000601919 RHOHQ15669 191 aa13.13□□□□□ -0.31
SSBP4-212ENST00000601919 DNAJC30Q96LL9 226 aa13.13□□□□□ -0.31
SSBP4-212ENST00000601919 C20orf78Q9BR46 151 aa13.13□□□□□ -0.31
SSBP4-212ENST00000601919 MAP1LC3AQ9H492 121 aa13.13□□□□□ -0.31
SSBP4-212ENST00000601919 PRO0255Q9UI72 69 aa13.13□□□□□ -0.31
SSBP4-212ENST00000601919 F5H768 121 aa13.12□□□□□ -0.31
SSBP4-212ENST00000601919 HIST1H2BKO60814 126 aa13.12□□□□□ -0.31
SSBP4-212ENST00000601919 HIST1H2BJP06899 126 aa13.12□□□□□ -0.31
SSBP4-212ENST00000601919 HIST1H2BOP23527 126 aa13.12□□□□□ -0.31
SSBP4-212ENST00000601919 HIST1H2BBP33778 126 aa13.12□□□□□ -0.31
SSBP4-212ENST00000601919 HIST1H2BDP58876 126 aa13.12□□□□□ -0.31
SSBP4-212ENST00000601919 HIST1H2BCP62807 126 aa13.12□□□□□ -0.31
SSBP4-212ENST00000601919 HIST2H2BEQ16778 126 aa13.12□□□□□ -0.31
SSBP4-212ENST00000601919 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.12□□□□□ -0.31
SSBP4-212ENST00000601919 Q6ZSN1 163 aa13.12□□□□□ -0.31
SSBP4-212ENST00000601919 SLC25A29Q8N8R3 303 aa13.12□□□□□ -0.31
SSBP4-212ENST00000601919 NRACQ8N912 160 aa13.12□□□□□ -0.31
SSBP4-212ENST00000601919 HIST1H2BHQ93079 126 aa13.12□□□□□ -0.31
SSBP4-212ENST00000601919 HIST1H2BNQ99877 126 aa13.12□□□□□ -0.31
SSBP4-212ENST00000601919 HIST1H2BMQ99879 126 aa13.12□□□□□ -0.31
SSBP4-212ENST00000601919 ST20Q9HBF5 79 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms