RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 C19orf71A6NCJ1 209 aa19.27■□□□□ 0.68
SSBP4-206ENST00000599699 GAGE12JA6NER3 117 aa19.27■□□□□ 0.68
SSBP4-206ENST00000599699 TMEM250H0YL14 139 aa19.27■□□□□ 0.68
SSBP4-206ENST00000599699 SNAI2O43623 268 aa19.27■□□□□ 0.68
SSBP4-206ENST00000599699 OR5AL1P0C617 328 aa19.27■□□□□ 0.68
SSBP4-206ENST00000599699 GZMBP10144 247 aa19.27■□□□□ 0.68
SSBP4-206ENST00000599699 GAGE1Q13065 139 aa19.27■□□□□ 0.68
SSBP4-206ENST00000599699 GAGE4Q13068 117 aa19.27■□□□□ 0.68
SSBP4-206ENST00000599699 GAGE5Q13069 117 aa19.27■□□□□ 0.68
SSBP4-206ENST00000599699 GAGE13Q4V321 117 aa19.27■□□□□ 0.68
SSBP4-206ENST00000599699 WFDC10BQ8IUB3 73 aa19.27■□□□□ 0.68
SSBP4-206ENST00000599699 C14orf178Q8N769 122 aaPredicted RBP19.27■□□□□ 0.68
SSBP4-206ENST00000599699 SSBP4Q9BWG4 385 aaPredicted RBP19.27■□□□□ 0.68
SSBP4-206ENST00000599699 DNAH17Q9UFH2 4485 aa19.27■□□□□ 0.68
SSBP4-206ENST00000599699 CRYGDP07320 174 aa19.26■□□□□ 0.67
SSBP4-206ENST00000599699 ATP6V0E2Q8NHE4 81 aa19.26■□□□□ 0.67
SSBP4-206ENST00000599699 LY96Q9Y6Y9 160 aa19.26■□□□□ 0.67
SSBP4-206ENST00000599699 XKRY2A2RUG3 117 aa19.25■□□□□ 0.67
SSBP4-206ENST00000599699 TIRAPP58753 221 aa19.25■□□□□ 0.67
SSBP4-206ENST00000599699 HECTD4Q9Y4D8 3996 aa19.24■□□□□ 0.67
SSBP4-206ENST00000599699 FAT2Q9NYQ8 4349 aa19.24■□□□□ 0.67
SSBP4-206ENST00000599699 FER1L6-AS1Q8NA97 138 aa19.24■□□□□ 0.67
SSBP4-206ENST00000599699 TRAV9-2A0A087WT02 112 aa19.23■□□□□ 0.67
SSBP4-206ENST00000599699 OCC1Q8TAD7 63 aa19.23■□□□□ 0.67
SSBP4-206ENST00000599699 OR10J3Q5JRS4 329 aa19.22■□□□□ 0.67
SSBP4-206ENST00000599699 FAM210AQ96ND0 272 aa19.22■□□□□ 0.67
SSBP4-206ENST00000599699 GTSF1LQ9H1H1 148 aa19.22■□□□□ 0.67
SSBP4-206ENST00000599699 Q9UF83 564 aa19.22■□□□□ 0.67
SSBP4-206ENST00000599699 TRAV8-6A0A0B4J262 113 aa19.21■□□□□ 0.67
SSBP4-206ENST00000599699 A0A1B0GVY2 172 aa19.21■□□□□ 0.67
SSBP4-206ENST00000599699 EVI2AP22794 236 aa19.21■□□□□ 0.67
SSBP4-206ENST00000599699 ZNF56Q15929 161 aa19.21■□□□□ 0.67
SSBP4-206ENST00000599699 NUDT10Q8NFP7 164 aa19.21■□□□□ 0.67
SSBP4-206ENST00000599699 NUDT11Q96G61 164 aa19.21■□□□□ 0.67
SSBP4-206ENST00000599699 K7EN84 100 aa19.2■□□□□ 0.66
SSBP4-206ENST00000599699 LINC00315P59091 139 aa19.2■□□□□ 0.66
SSBP4-206ENST00000599699 TNP2Q05952 138 aa19.2■□□□□ 0.66
SSBP4-206ENST00000599699 TEX261Q6UWH6 196 aa19.2■□□□□ 0.66
SSBP4-206ENST00000599699 IGLC6P0CF74 106 aa19.19■□□□□ 0.66
SSBP4-206ENST00000599699 SMIM17P0DL12 118 aa19.19■□□□□ 0.66
SSBP4-206ENST00000599699 BTF3P20290 206 aaKnown RBP19.19■□□□□ 0.66
SSBP4-206ENST00000599699 LELP1Q5T871 98 aa19.19■□□□□ 0.66
SSBP4-206ENST00000599699 RNASE7Q9H1E1 156 aaKnown RBP19.19■□□□□ 0.66
SSBP4-206ENST00000599699 DNAH10OSP0CZ25 163 aa19.18■□□□□ 0.66
SSBP4-206ENST00000599699 AP1S3Q96PC3 154 aa19.18■□□□□ 0.66
SSBP4-206ENST00000599699 IGHV3-38A0A0C4DH36 116 aa19.17■□□□□ 0.66
SSBP4-206ENST00000599699 F5H697 171 aa19.17■□□□□ 0.66
SSBP4-206ENST00000599699 LINC00694P0DN24 101 aa19.17■□□□□ 0.66
SSBP4-206ENST00000599699 RAB4BP61018 213 aa19.17■□□□□ 0.66
SSBP4-206ENST00000599699 RPP21Q9H633 154 aaKnown RBP19.17■□□□□ 0.66
SSBP4-206ENST00000599699 CACNG7P62955 275 aa19.16■□□□□ 0.66
SSBP4-206ENST00000599699 SMIM7Q9BQ49 75 aa19.16■□□□□ 0.66
SSBP4-206ENST00000599699 TRBV10-1A0A0K0K1A3 114 aa19.15■□□□□ 0.66
SSBP4-206ENST00000599699 F2Z2F3 143 aa19.15■□□□□ 0.66
SSBP4-206ENST00000599699 K7EP13 123 aa19.15■□□□□ 0.66
SSBP4-206ENST00000599699 LYZL1Q6UWQ5 148 aa19.15■□□□□ 0.66
SSBP4-206ENST00000599699 NDUFS6O75380 124 aaKnown RBP19.14■□□□□ 0.65
SSBP4-206ENST00000599699 RPL36AP83881 106 aaKnown RBP19.14■□□□□ 0.65
SSBP4-206ENST00000599699 RPL36ALQ969Q0 106 aaKnown RBP19.14■□□□□ 0.65
SSBP4-206ENST00000599699 SRP19P09132 144 aaKnown RBP19.13■□□□□ 0.65
SSBP4-206ENST00000599699 MSRB1Q9NZV6 116 aa19.13■□□□□ 0.65
SSBP4-206ENST00000599699 TNFRSF18Q9Y5U5 241 aa19.13■□□□□ 0.65
SSBP4-206ENST00000599699 ZNF727A8MUV8 499 aa19.12■□□□□ 0.65
SSBP4-206ENST00000599699 C10orf126Q8N4M7 172 aa19.12■□□□□ 0.65
SSBP4-206ENST00000599699 GATCO43716 136 aaKnown RBP19.11■□□□□ 0.65
SSBP4-206ENST00000599699 LINC01556Q5JQF7 62 aa19.11■□□□□ 0.65
SSBP4-206ENST00000599699 TRBV7-3A0A075B6L6 115 aa19.1■□□□□ 0.65
SSBP4-206ENST00000599699 A0A087WWC5 75 aa19.1■□□□□ 0.65
SSBP4-206ENST00000599699 MGPP08493 103 aa19.1■□□□□ 0.65
SSBP4-206ENST00000599699 NFE4Q86UQ8 179 aa19.1■□□□□ 0.65
SSBP4-206ENST00000599699 KIF25-AS1Q9Y6Z4 181 aa19.1■□□□□ 0.65
SSBP4-206ENST00000599699 IGHV3-30P01768 117 aa19.09■□□□□ 0.65
SSBP4-206ENST00000599699 IGHV3-33P01772 117 aa19.09■□□□□ 0.65
SSBP4-206ENST00000599699 IGHV3-30-3P0DP02 117 aa19.09■□□□□ 0.65
SSBP4-206ENST00000599699 IGHV3-30-5P0DP03 117 aa19.09■□□□□ 0.65
SSBP4-206ENST00000599699 ERVFC1-1P60608 527 aa19.09■□□□□ 0.65
SSBP4-206ENST00000599699 CTRLP40313 264 aa19.08■□□□□ 0.64
SSBP4-206ENST00000599699 PKD1P98161 4303 aa19.08■□□□□ 0.64
SSBP4-206ENST00000599699 TRGC1P0CF51 173 aa19.07■□□□□ 0.64
SSBP4-206ENST00000599699 NTF3P20783 257 aa19.07■□□□□ 0.64
SSBP4-206ENST00000599699 UBE2D3P61077 147 aa19.07■□□□□ 0.64
SSBP4-206ENST00000599699 UBE2D2P62837 147 aa19.07■□□□□ 0.64
SSBP4-206ENST00000599699 FAM231DQ6ZW35 169 aa19.07■□□□□ 0.64
SSBP4-206ENST00000599699 NEXN-AS1Q8NBZ9 246 aa19.07■□□□□ 0.64
SSBP4-206ENST00000599699 OR10G8Q8NGN5 311 aa19.07■□□□□ 0.64
SSBP4-206ENST00000599699 TWIST1Q15672 202 aa19.06■□□□□ 0.64
SSBP4-206ENST00000599699 WDR73Q6P4I2 378 aa19.06■□□□□ 0.64
SSBP4-206ENST00000599699 Q6ZRN7 208 aaPredicted RBP19.06■□□□□ 0.64
SSBP4-206ENST00000599699 LINC01551Q86U37 167 aa19.06■□□□□ 0.64
SSBP4-206ENST00000599699 PEA15Q15121 130 aa19.05■□□□□ 0.64
SSBP4-206ENST00000599699 A8MWL6 223 aa19.04■□□□□ 0.64
SSBP4-206ENST00000599699 SREK1IP1Q8N9Q2 155 aaPredicted RBP19.04■□□□□ 0.64
SSBP4-206ENST00000599699 GTSF1Q8WW33 167 aa19.03■□□□□ 0.64
SSBP4-206ENST00000599699 PKHD1P08F94 4074 aa19.02■□□□□ 0.64
SSBP4-206ENST00000599699 TMEM241Q24JQ0 296 aa19.02■□□□□ 0.64
SSBP4-206ENST00000599699 FAM74A3Q4VXF1 159 aa19.02■□□□□ 0.64
SSBP4-206ENST00000599699 DPH3P1Q9H4G8 78 aa19.02■□□□□ 0.64
SSBP4-206ENST00000599699 IBA57-AS1B1ANH7 110 aa19.01■□□□□ 0.63
SSBP4-206ENST00000599699 C9JQL5 133 aa19.01■□□□□ 0.63
SSBP4-206ENST00000599699 H7C1H1 209 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms