RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 K7EQD1 137 aa11.96□□□□□ -0.49
SHKBP1-203ENST00000594298 NDUFS6O75380 124 aaKnown RBP11.96□□□□□ -0.49
SHKBP1-203ENST00000594298 NXPH4O95158 308 aa11.96□□□□□ -0.49
SHKBP1-203ENST00000594298 RPS20P60866 119 aaKnown RBP11.96□□□□□ -0.49
SHKBP1-203ENST00000594298 RHOHQ15669 191 aa11.96□□□□□ -0.49
SHKBP1-203ENST00000594298 DMRTA1Q5VZB9 504 aa11.96□□□□□ -0.49
SHKBP1-203ENST00000594298 CDPF1Q6NVV7 123 aa11.96□□□□□ -0.49
SHKBP1-203ENST00000594298 IGHV3-73A0A0B4J1V6 119 aa11.95□□□□□ -0.5
SHKBP1-203ENST00000594298 XKRY2A2RUG3 117 aa11.95□□□□□ -0.5
SHKBP1-203ENST00000594298 EPM2AB3EWF7 344 aa11.95□□□□□ -0.5
SHKBP1-203ENST00000594298 RHODO00212 210 aa11.95□□□□□ -0.5
SHKBP1-203ENST00000594298 IGLV2-8P01709 118 aa11.95□□□□□ -0.5
SHKBP1-203ENST00000594298 RPL19P84098 196 aaKnown RBP11.95□□□□□ -0.5
SHKBP1-203ENST00000594298 TEX261Q6UWH6 196 aa11.95□□□□□ -0.5
SHKBP1-203ENST00000594298 PARLQ9H300 379 aa11.95□□□□□ -0.5
SHKBP1-203ENST00000594298 M0R381 172 aa11.94□□□□□ -0.5
SHKBP1-203ENST00000594298 EREGO14944 169 aa11.94□□□□□ -0.5
SHKBP1-203ENST00000594298 P01737 135 aa11.94□□□□□ -0.5
SHKBP1-203ENST00000594298 ERVFC1-1P60608 527 aa11.94□□□□□ -0.5
SHKBP1-203ENST00000594298 TOR2AQ5JU69 321 aa11.94□□□□□ -0.5
SHKBP1-203ENST00000594298 LYPD5Q6UWN5 251 aa11.94□□□□□ -0.5
SHKBP1-203ENST00000594298 SLC25A29Q8N8R3 303 aa11.94□□□□□ -0.5
SHKBP1-203ENST00000594298 SFRP2Q96HF1 295 aa11.94□□□□□ -0.5
SHKBP1-203ENST00000594298 FAM210AQ96ND0 272 aa11.94□□□□□ -0.5
SHKBP1-203ENST00000594298 OR5AL1P0C617 328 aa11.93□□□□□ -0.5
SHKBP1-203ENST00000594298 NFE4Q86UQ8 179 aa11.93□□□□□ -0.5
SHKBP1-203ENST00000594298 OR2D3Q8NGH3 330 aa11.93□□□□□ -0.5
SHKBP1-203ENST00000594298 SSBP4Q9BWG4 385 aaPredicted RBP11.93□□□□□ -0.5
SHKBP1-203ENST00000594298 TRBV20OR9-2A0A075B6H5 130 aa11.92□□□□□ -0.5
SHKBP1-203ENST00000594298 C19orf71A6NCJ1 209 aa11.92□□□□□ -0.5
SHKBP1-203ENST00000594298 SNAI2O43623 268 aa11.92□□□□□ -0.5
SHKBP1-203ENST00000594298 SPANXN1Q5VSR9 72 aa11.92□□□□□ -0.5
SHKBP1-203ENST00000594298 HERC1Q15751 4861 aa11.92□□□□□ -0.5
SHKBP1-203ENST00000594298 CEBPGP53567 150 aa11.91□□□□□ -0.5
SHKBP1-203ENST00000594298 XGP55808 180 aa11.91□□□□□ -0.5
SHKBP1-203ENST00000594298 JPT2Q9H910 190 aa11.91□□□□□ -0.5
SHKBP1-203ENST00000594298 TRAV9-2A0A087WT02 112 aa11.9□□□□□ -0.5
SHKBP1-203ENST00000594298 K7EP13 123 aa11.9□□□□□ -0.5
SHKBP1-203ENST00000594298 FAM74A4Q5TZK3 123 aa11.9□□□□□ -0.5
SHKBP1-203ENST00000594298 UFSP1Q6NVU6 142 aa11.9□□□□□ -0.5
SHKBP1-203ENST00000594298 OCC1Q8TAD7 63 aa11.9□□□□□ -0.5
SHKBP1-203ENST00000594298 TNFRSF18Q9Y5U5 241 aa11.9□□□□□ -0.5
SHKBP1-203ENST00000594298 LOC100131303A0A0U1RQF7 123 aa11.89□□□□□ -0.51
SHKBP1-203ENST00000594298 TIRAPP58753 221 aa11.89□□□□□ -0.51
SHKBP1-203ENST00000594298 FER1L6-AS1Q8NA97 138 aa11.89□□□□□ -0.51
SHKBP1-203ENST00000594298 NUDT10Q8NFP7 164 aa11.89□□□□□ -0.51
SHKBP1-203ENST00000594298 OR10AG1Q8NH19 301 aa11.89□□□□□ -0.51
SHKBP1-203ENST00000594298 NUDT11Q96G61 164 aa11.89□□□□□ -0.51
SHKBP1-203ENST00000594298 SAMD10Q9BYL1 202 aa11.89□□□□□ -0.51
SHKBP1-203ENST00000594298 LY96Q9Y6Y9 160 aa11.89□□□□□ -0.51
SHKBP1-203ENST00000594298 A0A087WTM6 91 aa11.88□□□□□ -0.51
SHKBP1-203ENST00000594298 A0A087WWL8 130 aa11.88□□□□□ -0.51
SHKBP1-203ENST00000594298 F2Z2F3 143 aa11.88□□□□□ -0.51
SHKBP1-203ENST00000594298 CRYGDP07320 174 aa11.88□□□□□ -0.51
SHKBP1-203ENST00000594298 FUSP35637 526 aaKnown RBP eCLIP11.88□□□□□ -0.51
SHKBP1-203ENST00000594298 FAT1Q14517 4588 aa11.87□□□□□ -0.51
SHKBP1-203ENST00000594298 INAFM2P0DMQ5 153 aa11.87□□□□□ -0.51
SHKBP1-203ENST00000594298 CACNG7P62955 275 aa11.87□□□□□ -0.51
SHKBP1-203ENST00000594298 Q6ZSN1 163 aa11.87□□□□□ -0.51
SHKBP1-203ENST00000594298 ATP6V0E2Q8NHE4 81 aa11.87□□□□□ -0.51
SHKBP1-203ENST00000594298 SMIM7Q9BQ49 75 aa11.87□□□□□ -0.51
SHKBP1-203ENST00000594298 TPPP3Q9BW30 176 aa11.87□□□□□ -0.51
SHKBP1-203ENST00000594298 SRP19P09132 144 aaKnown RBP11.86□□□□□ -0.51
SHKBP1-203ENST00000594298 IGLC6P0CF74 106 aa11.86□□□□□ -0.51
SHKBP1-203ENST00000594298 DNAH10OSP0CZ25 163 aa11.86□□□□□ -0.51
SHKBP1-203ENST00000594298 SMIM17P0DL12 118 aa11.86□□□□□ -0.51
SHKBP1-203ENST00000594298 GZMBP10144 247 aa11.86□□□□□ -0.51
SHKBP1-203ENST00000594298 PEA15Q15121 130 aa11.86□□□□□ -0.51
SHKBP1-203ENST00000594298 SMDT1Q9H4I9 107 aa11.86□□□□□ -0.51
SHKBP1-203ENST00000594298 RPP21Q9H633 154 aaKnown RBP11.86□□□□□ -0.51
SHKBP1-203ENST00000594298 MUC21A0A0G2JKD1 596 aa11.85□□□□□ -0.51
SHKBP1-203ENST00000594298 MUC21A0A140T8X8 626 aa11.85□□□□□ -0.51
SHKBP1-203ENST00000594298 ZNF727A8MUV8 499 aa11.85□□□□□ -0.51
SHKBP1-203ENST00000594298 K7EN84 100 aa11.85□□□□□ -0.51
SHKBP1-203ENST00000594298 KRTAP10-1P60331 282 aa11.85□□□□□ -0.51
SHKBP1-203ENST00000594298 RAB4BP61018 213 aa11.85□□□□□ -0.51
SHKBP1-203ENST00000594298 FAM74A3Q4VXF1 159 aa11.85□□□□□ -0.51
SHKBP1-203ENST00000594298 AP1S3Q96PC3 154 aa11.85□□□□□ -0.51
SHKBP1-203ENST00000594298 RNASE7Q9H1E1 156 aaKnown RBP11.85□□□□□ -0.51
SHKBP1-203ENST00000594298 GTSF1LQ9H1H1 148 aa11.85□□□□□ -0.51
SHKBP1-203ENST00000594298 MSRB1Q9NZV6 116 aa11.85□□□□□ -0.51
SHKBP1-203ENST00000594298 TRAV8-6A0A0B4J262 113 aa11.84□□□□□ -0.51
SHKBP1-203ENST00000594298 TRBV10-1A0A0K0K1A3 114 aa11.84□□□□□ -0.51
SHKBP1-203ENST00000594298 GAGE12JA6NER3 117 aa11.84□□□□□ -0.51
SHKBP1-203ENST00000594298 GATCO43716 136 aaKnown RBP11.84□□□□□ -0.51
SHKBP1-203ENST00000594298 EVI2AP22794 236 aa11.84□□□□□ -0.51
SHKBP1-203ENST00000594298 RAB14P61106 215 aa11.84□□□□□ -0.51
SHKBP1-203ENST00000594298 SSTP61278 116 aa11.84□□□□□ -0.51
SHKBP1-203ENST00000594298 GAGE1Q13065 139 aa11.84□□□□□ -0.51
SHKBP1-203ENST00000594298 GAGE4Q13068 117 aa11.84□□□□□ -0.51
SHKBP1-203ENST00000594298 GAGE5Q13069 117 aa11.84□□□□□ -0.51
SHKBP1-203ENST00000594298 GAGE13Q4V321 117 aa11.84□□□□□ -0.51
SHKBP1-203ENST00000594298 Q5VSD8 79 aa11.84□□□□□ -0.51
SHKBP1-203ENST00000594298 WDR73Q6P4I2 378 aa11.84□□□□□ -0.51
SHKBP1-203ENST00000594298 FAM231DQ6ZW35 169 aa11.84□□□□□ -0.51
SHKBP1-203ENST00000594298 WFDC10BQ8IUB3 73 aa11.84□□□□□ -0.51
SHKBP1-203ENST00000594298 C14orf178Q8N769 122 aaPredicted RBP11.84□□□□□ -0.51
SHKBP1-203ENST00000594298 FRZBQ92765 325 aa11.84□□□□□ -0.51
SHKBP1-203ENST00000594298 ZNF56Q15929 161 aa11.83□□□□□ -0.52
SHKBP1-203ENST00000594298 F5H697 171 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms