RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 GTSF1LQ9H1H1 148 aa12.51□□□□□ -0.41
SHKBP1-202ENST00000593764 IGHV3-38A0A0C4DH36 116 aa12.5□□□□□ -0.41
SHKBP1-202ENST00000593764 GAGE12JA6NER3 117 aa12.5□□□□□ -0.41
SHKBP1-202ENST00000593764 PDE6DO43924 150 aa12.5□□□□□ -0.41
SHKBP1-202ENST00000593764 BCL2P10415 239 aa12.5□□□□□ -0.41
SHKBP1-202ENST00000593764 GAGE1Q13065 139 aa12.5□□□□□ -0.41
SHKBP1-202ENST00000593764 GAGE4Q13068 117 aa12.5□□□□□ -0.41
SHKBP1-202ENST00000593764 GAGE5Q13069 117 aa12.5□□□□□ -0.41
SHKBP1-202ENST00000593764 GAGE13Q4V321 117 aa12.5□□□□□ -0.41
SHKBP1-202ENST00000593764 LELP1Q5T871 98 aa12.5□□□□□ -0.41
SHKBP1-202ENST00000593764 FAM74A4Q5TZK3 123 aa12.5□□□□□ -0.41
SHKBP1-202ENST00000593764 SNAI2O43623 268 aa12.49□□□□□ -0.41
SHKBP1-202ENST00000593764 IFNA1P01562 189 aa12.49□□□□□ -0.41
SHKBP1-202ENST00000593764 LINC01556Q5JQF7 62 aa12.49□□□□□ -0.41
SHKBP1-202ENST00000593764 OR10AG1Q8NH19 301 aa12.49□□□□□ -0.41
SHKBP1-202ENST00000593764 VAX2Q9UIW0 290 aa12.49□□□□□ -0.41
SHKBP1-202ENST00000593764 TRBV20OR9-2A0A075B6H5 130 aa12.48□□□□□ -0.41
SHKBP1-202ENST00000593764 OR5AL1P0C617 328 aa12.48□□□□□ -0.41
SHKBP1-202ENST00000593764 ALKAL2Q6UX46 152 aa12.48□□□□□ -0.41
SHKBP1-202ENST00000593764 SPATA12Q7Z6I5 190 aa12.48□□□□□ -0.41
SHKBP1-202ENST00000593764 MED9Q9NWA0 146 aa12.48□□□□□ -0.41
SHKBP1-202ENST00000593764 MSRB1Q9NZV6 116 aa12.48□□□□□ -0.41
SHKBP1-202ENST00000593764 BOLA1Q9Y3E2 137 aa12.48□□□□□ -0.41
SHKBP1-202ENST00000593764 DNAH5Q8TE73 4624 aa12.48□□□□□ -0.41
SHKBP1-202ENST00000593764 TRAV8-6A0A0B4J262 113 aa12.47□□□□□ -0.41
SHKBP1-202ENST00000593764 C19orf71A6NCJ1 209 aa12.47□□□□□ -0.41
SHKBP1-202ENST00000593764 C16orf90A8MZG2 172 aa12.47□□□□□ -0.41
SHKBP1-202ENST00000593764 NKX2-5P52952 324 aaPredicted RBP12.47□□□□□ -0.41
SHKBP1-202ENST00000593764 KRTAP10-2P60368 255 aa12.47□□□□□ -0.41
SHKBP1-202ENST00000593764 OR10J3Q5JRS4 329 aa12.47□□□□□ -0.41
SHKBP1-202ENST00000593764 NFE4Q86UQ8 179 aa12.47□□□□□ -0.41
SHKBP1-202ENST00000593764 SMIM12Q96EX1 92 aa12.47□□□□□ -0.41
SHKBP1-202ENST00000593764 HSPG2P98160 4391 aa12.46□□□□□ -0.41
SHKBP1-202ENST00000593764 RYR1P21817 5038 aa12.46□□□□□ -0.41
SHKBP1-202ENST00000593764 MUC21A0A0G2JKD1 596 aa12.46□□□□□ -0.41
SHKBP1-202ENST00000593764 MUC21A0A140T8X8 626 aa12.46□□□□□ -0.41
SHKBP1-202ENST00000593764 GNG4P50150 75 aa12.46□□□□□ -0.41
SHKBP1-202ENST00000593764 C10orf126Q8N4M7 172 aa12.46□□□□□ -0.41
SHKBP1-202ENST00000593764 TAGLN2P37802 199 aaKnown RBP12.45□□□□□ -0.42
SHKBP1-202ENST00000593764 LYPD6BQ8NI32 183 aa12.45□□□□□ -0.42
SHKBP1-202ENST00000593764 GZMBP10144 247 aa12.44□□□□□ -0.42
SHKBP1-202ENST00000593764 BLOC1S1P78537 153 aa12.44□□□□□ -0.42
SHKBP1-202ENST00000593764 IBA57-AS1B1ANH7 110 aa12.43□□□□□ -0.42
SHKBP1-202ENST00000593764 IGLC6P0CF74 106 aa12.43□□□□□ -0.42
SHKBP1-202ENST00000593764 SPANXN1Q5VSR9 72 aa12.43□□□□□ -0.42
SHKBP1-202ENST00000593764 OR2D3Q8NGH3 330 aa12.43□□□□□ -0.42
SHKBP1-202ENST00000593764 DAZAP1Q96EP5 407 aaKnown RBP12.43□□□□□ -0.42
SHKBP1-202ENST00000593764 TRBV10-1A0A0K0K1A3 114 aa12.42□□□□□ -0.42
SHKBP1-202ENST00000593764 IGHV3-30P01768 117 aa12.42□□□□□ -0.42
SHKBP1-202ENST00000593764 IGHV3-33P01772 117 aa12.42□□□□□ -0.42
SHKBP1-202ENST00000593764 IGHV3-30-3P0DP02 117 aa12.42□□□□□ -0.42
SHKBP1-202ENST00000593764 IGHV3-30-5P0DP03 117 aa12.42□□□□□ -0.42
SHKBP1-202ENST00000593764 RAB4BP61018 213 aa12.42□□□□□ -0.42
SHKBP1-202ENST00000593764 SSTP61278 116 aa12.42□□□□□ -0.42
SHKBP1-202ENST00000593764 Q8N3U1 123 aa12.42□□□□□ -0.42
SHKBP1-202ENST00000593764 KIF25-AS1Q9Y6Z4 181 aa12.42□□□□□ -0.42
SHKBP1-202ENST00000593764 RBFOX3A6NFN3 312 aa12.41□□□□□ -0.42
SHKBP1-202ENST00000593764 RPS20P60866 119 aaKnown RBP12.41□□□□□ -0.42
SHKBP1-202ENST00000593764 APOBP04114 4563 aaKnown RBP12.41□□□□□ -0.42
SHKBP1-202ENST00000593764 TRBV7-3A0A075B6L6 115 aa12.4□□□□□ -0.42
SHKBP1-202ENST00000593764 A0A087WTM6 91 aa12.4□□□□□ -0.42
SHKBP1-202ENST00000593764 A0A087WWC5 75 aa12.4□□□□□ -0.42
SHKBP1-202ENST00000593764 P01737 135 aa12.4□□□□□ -0.42
SHKBP1-202ENST00000593764 ERVFC1-1P60608 527 aa12.4□□□□□ -0.42
SHKBP1-202ENST00000593764 UBE2D3P61077 147 aa12.4□□□□□ -0.42
SHKBP1-202ENST00000593764 UBE2D2P62837 147 aa12.4□□□□□ -0.42
SHKBP1-202ENST00000593764 FER1L6-AS1Q8NA97 138 aa12.4□□□□□ -0.42
SHKBP1-202ENST00000593764 OR10G8Q8NGN5 311 aa12.4□□□□□ -0.42
SHKBP1-202ENST00000593764 K7EN84 100 aa12.39□□□□□ -0.43
SHKBP1-202ENST00000593764 RPL36AP83881 106 aaKnown RBP12.39□□□□□ -0.43
SHKBP1-202ENST00000593764 NEXN-AS1Q8NBZ9 246 aa12.39□□□□□ -0.43
SHKBP1-202ENST00000593764 NUDT10Q8NFP7 164 aa12.39□□□□□ -0.43
SHKBP1-202ENST00000593764 OCC1Q8TAD7 63 aa12.39□□□□□ -0.43
SHKBP1-202ENST00000593764 RPL36ALQ969Q0 106 aaKnown RBP12.39□□□□□ -0.43
SHKBP1-202ENST00000593764 NUDT11Q96G61 164 aa12.39□□□□□ -0.43
SHKBP1-202ENST00000593764 BIN3Q9NQY0 253 aa12.39□□□□□ -0.43
SHKBP1-202ENST00000593764 FUSP35637 526 aaKnown RBP eCLIP12.38□□□□□ -0.43
SHKBP1-202ENST00000593764 ZNF56Q15929 161 aa12.38□□□□□ -0.43
SHKBP1-202ENST00000593764 TPPP3Q9BW30 176 aa12.38□□□□□ -0.43
SHKBP1-202ENST00000593764 TMEM250H0YL14 139 aa12.37□□□□□ -0.43
SHKBP1-202ENST00000593764 Q9HAA7 133 aa12.37□□□□□ -0.43
SHKBP1-202ENST00000593764 PGPEP1Q9NXJ5 209 aa12.37□□□□□ -0.43
SHKBP1-202ENST00000593764 XKRY2A2RUG3 117 aa12.36□□□□□ -0.43
SHKBP1-202ENST00000593764 LRCOL1A6NCL2 159 aa12.36□□□□□ -0.43
SHKBP1-202ENST00000593764 EREGO14944 169 aa12.36□□□□□ -0.43
SHKBP1-202ENST00000593764 CDK2AP2O75956 126 aa12.36□□□□□ -0.43
SHKBP1-202ENST00000593764 LAGE3Q14657 143 aa12.36□□□□□ -0.43
SHKBP1-202ENST00000593764 LYZL1Q6UWQ5 148 aa12.36□□□□□ -0.43
SHKBP1-202ENST00000593764 DAZ4Q86SG3 579 aaKnown RBP12.36□□□□□ -0.43
SHKBP1-202ENST00000593764 AP1S3Q96PC3 154 aa12.36□□□□□ -0.43
SHKBP1-202ENST00000593764 KRTAP17-1Q9BYP8 105 aa12.36□□□□□ -0.43
SHKBP1-202ENST00000593764 RNASE7Q9H1E1 156 aaKnown RBP12.36□□□□□ -0.43
SHKBP1-202ENST00000593764 DAZ3Q9NR90 486 aaKnown RBP12.36□□□□□ -0.43
SHKBP1-202ENST00000593764 F2Z2F3 143 aa12.35□□□□□ -0.43
SHKBP1-202ENST00000593764 F5H697 171 aa12.35□□□□□ -0.43
SHKBP1-202ENST00000593764 CACNG7P62955 275 aa12.35□□□□□ -0.43
SHKBP1-202ENST00000593764 NIT1Q86X76 327 aa12.35□□□□□ -0.43
SHKBP1-202ENST00000593764 PCLOQ9Y6V0 5065 aa12.34□□□□□ -0.43
SHKBP1-202ENST00000593764 SMIM17P0DL12 118 aa12.34□□□□□ -0.43
SHKBP1-202ENST00000593764 NTF3P20783 257 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms