RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 DUSP14O95147 198 aaKnown RBP13.93□□□□□ -0.18
DDX39A-206ENST00000587730 CFHR3Q02985 330 aa13.93□□□□□ -0.18
DDX39A-206ENST00000587730 WFDC2Q14508 124 aa13.93□□□□□ -0.18
DDX39A-206ENST00000587730 RHOHQ15669 191 aa13.93□□□□□ -0.18
DDX39A-206ENST00000587730 SUMO4Q6EEV6 95 aa13.93□□□□□ -0.18
DDX39A-206ENST00000587730 CLEC2AQ6UVW9 174 aa13.93□□□□□ -0.18
DDX39A-206ENST00000587730 COL12A1Q99715 3063 aa13.92□□□□□ -0.18
DDX39A-206ENST00000587730 LY6EQ16553 131 aa13.92□□□□□ -0.18
DDX39A-206ENST00000587730 MORN3Q6PF18 240 aaPredicted RBP13.92□□□□□ -0.18
DDX39A-206ENST00000587730 PGPEP1Q9NXJ5 209 aa13.92□□□□□ -0.18
DDX39A-206ENST00000587730 IGLV4-69A0A075B6H9 119 aa13.92□□□□□ -0.18
DDX39A-206ENST00000587730 IGHV4-61A0A0C4DH41 118 aa13.92□□□□□ -0.18
DDX39A-206ENST00000587730 CRYGDP07320 174 aa13.92□□□□□ -0.18
DDX39A-206ENST00000587730 DCANP1Q8TF63 244 aa13.92□□□□□ -0.18
DDX39A-206ENST00000587730 PRO0461Q9UI25 63 aa13.92□□□□□ -0.18
DDX39A-206ENST00000587730 SNRPD3P62318 126 aaKnown RBP13.91□□□□□ -0.18
DDX39A-206ENST00000587730 C9orf85Q96MD7 179 aa13.91□□□□□ -0.18
DDX39A-206ENST00000587730 SPATA25Q9BR10 227 aa13.91□□□□□ -0.18
DDX39A-206ENST00000587730 MSMBP08118 114 aa13.9□□□□□ -0.18
DDX39A-206ENST00000587730 CD7P09564 240 aa13.9□□□□□ -0.18
DDX39A-206ENST00000587730 IGHV4-38-2P0DP08 117 aa13.9□□□□□ -0.18
DDX39A-206ENST00000587730 GATA3P23771 443 aa13.9□□□□□ -0.18
DDX39A-206ENST00000587730 CCL19Q99731 98 aa13.9□□□□□ -0.18
DDX39A-206ENST00000587730 LRBAP50851 2863 aa13.9□□□□□ -0.18
DDX39A-206ENST00000587730 HRNRQ86YZ3 2850 aaPredicted RBP13.9□□□□□ -0.18
DDX39A-206ENST00000587730 GAGE12HA6NDE8 117 aa13.9□□□□□ -0.18
DDX39A-206ENST00000587730 SDHAF1A6NFY7 115 aa13.9□□□□□ -0.18
DDX39A-206ENST00000587730 F5H697 171 aa13.9□□□□□ -0.18
DDX39A-206ENST00000587730 NSUN5P1Q3KNT7 163 aa13.9□□□□□ -0.18
DDX39A-206ENST00000587730 ZNF876PQ49A33 203 aa13.9□□□□□ -0.18
DDX39A-206ENST00000587730 HECTD1Q9ULT8 2610 aa13.89□□□□□ -0.19
DDX39A-206ENST00000587730 TRBV20-1A0A075B6N2 111 aa13.89□□□□□ -0.19
DDX39A-206ENST00000587730 TSHBP01222 138 aa13.89□□□□□ -0.19
DDX39A-206ENST00000587730 TRPT1Q86TN4 253 aaKnown RBP13.89□□□□□ -0.19
DDX39A-206ENST00000587730 DCHS2Q6V1P9 2916 aa13.89□□□□□ -0.19
DDX39A-206ENST00000587730 UBR5O95071 2799 aaPredicted RBP13.88□□□□□ -0.19
DDX39A-206ENST00000587730 A0A0J9YY99 117 aa13.88□□□□□ -0.19
DDX39A-206ENST00000587730 DEFB1P60022 68 aa13.88□□□□□ -0.19
DDX39A-206ENST00000587730 ETDBQ3ZM63 59 aa13.88□□□□□ -0.19
DDX39A-206ENST00000587730 NFE4Q86UQ8 179 aa13.88□□□□□ -0.19
DDX39A-206ENST00000587730 VCX2Q9H322 139 aa13.88□□□□□ -0.19
DDX39A-206ENST00000587730 IGHV3-16A0A0C4DH30 117 aa13.87□□□□□ -0.19
DDX39A-206ENST00000587730 SPRY2O43597 315 aa13.87□□□□□ -0.19
DDX39A-206ENST00000587730 BLCAPP62952 87 aa13.87□□□□□ -0.19
DDX39A-206ENST00000587730 USP9XQ93008 2570 aaPredicted RBP13.87□□□□□ -0.19
DDX39A-206ENST00000587730 IGKV3-7A0A075B6H7 116 aa13.87□□□□□ -0.19
DDX39A-206ENST00000587730 C19orf84I3L1E1 186 aa13.87□□□□□ -0.19
DDX39A-206ENST00000587730 SLC25A29Q8N8R3 303 aa13.87□□□□□ -0.19
DDX39A-206ENST00000587730 TSSC4Q9Y5U2 329 aaPredicted RBP13.87□□□□□ -0.19
DDX39A-206ENST00000587730 SPTBN1Q01082 2364 aaKnown RBP13.86□□□□□ -0.19
DDX39A-206ENST00000587730 TRAV12-3A0A0B4J271 114 aa13.86□□□□□ -0.19
DDX39A-206ENST00000587730 UBE2D3P61077 147 aa13.86□□□□□ -0.19
DDX39A-206ENST00000587730 UBE2D2P62837 147 aa13.86□□□□□ -0.19
DDX39A-206ENST00000587730 AMTNQ6UX39 209 aa13.86□□□□□ -0.19
DDX39A-206ENST00000587730 RNF152Q8N8N0 203 aa13.86□□□□□ -0.19
DDX39A-206ENST00000587730 A0A0J9YX75 114 aa13.85□□□□□ -0.19
DDX39A-206ENST00000587730 PSMB8P28062 276 aa13.85□□□□□ -0.19
DDX39A-206ENST00000587730 DSCR9P59020 149 aa13.85□□□□□ -0.19
DDX39A-206ENST00000587730 CFAP126Q5VTH2 177 aa13.85□□□□□ -0.19
DDX39A-206ENST00000587730 PLEKHB2Q96CS7 222 aa13.85□□□□□ -0.19
DDX39A-206ENST00000587730 SPAG8Q99932 426 aaPredicted RBP13.85□□□□□ -0.19
DDX39A-206ENST00000587730 C1QTNF4Q9BXJ3 329 aa13.85□□□□□ -0.19
DDX39A-206ENST00000587730 B4DSR2 109 aa13.85□□□□□ -0.19
DDX39A-206ENST00000587730 APOMO95445 188 aa13.85□□□□□ -0.19
DDX39A-206ENST00000587730 LGALS3P17931 250 aaKnown RBP13.85□□□□□ -0.19
DDX39A-206ENST00000587730 TMEM170BQ5T4T1 132 aa13.85□□□□□ -0.19
DDX39A-206ENST00000587730 LCNL1Q6ZST4 164 aa13.85□□□□□ -0.19
DDX39A-206ENST00000587730 MAST4O15021 2626 aa13.84□□□□□ -0.19
DDX39A-206ENST00000587730 TRGV11A0A075B6L2 103 aa13.84□□□□□ -0.19
DDX39A-206ENST00000587730 IGHV1OR15-1A0A075B7D0 117 aa13.84□□□□□ -0.19
DDX39A-206ENST00000587730 A0A087WWL8 130 aa13.84□□□□□ -0.19
DDX39A-206ENST00000587730 M0QY20 66 aa13.84□□□□□ -0.19
DDX39A-206ENST00000587730 TSPAN13O95857 204 aa13.84□□□□□ -0.19
DDX39A-206ENST00000587730 AZU1P20160 251 aa13.84□□□□□ -0.19
DDX39A-206ENST00000587730 NDUFA11Q86Y39 141 aa13.84□□□□□ -0.19
DDX39A-206ENST00000587730 J3QQQ9 107 aa13.83□□□□□ -0.2
DDX39A-206ENST00000587730 ATP5J2P56134 94 aa13.83□□□□□ -0.2
DDX39A-206ENST00000587730 EDA2RQ9HAV5 297 aa13.83□□□□□ -0.2
DDX39A-206ENST00000587730 MDFICQ9P1T7 246 aa13.83□□□□□ -0.2
DDX39A-206ENST00000587730 ZNF256Q9Y2P7 627 aaPredicted RBP13.83□□□□□ -0.2
DDX39A-206ENST00000587730 K7EQG2 157 aa13.83□□□□□ -0.2
DDX39A-206ENST00000587730 LEPROTO15243 131 aa13.83□□□□□ -0.2
DDX39A-206ENST00000587730 IGHV3-30P01768 117 aa13.83□□□□□ -0.2
DDX39A-206ENST00000587730 IGHV3-30-5P0DP03 117 aa13.83□□□□□ -0.2
DDX39A-206ENST00000587730 ZNF56Q15929 161 aa13.83□□□□□ -0.2
DDX39A-206ENST00000587730 SH2D6Q7Z4S9 175 aa13.83□□□□□ -0.2
DDX39A-206ENST00000587730 KLHL30-AS1Q8NEE0 82 aa13.83□□□□□ -0.2
DDX39A-206ENST00000587730 CRYBA4P53673 196 aa13.82□□□□□ -0.2
DDX39A-206ENST00000587730 RPL39P62891 51 aaKnown RBP13.82□□□□□ -0.2
DDX39A-206ENST00000587730 LOC107984156A0A0G2JMH3 177 aa13.81□□□□□ -0.2
DDX39A-206ENST00000587730 I3L3M4 83 aa13.81□□□□□ -0.2
DDX39A-206ENST00000587730 SRD5A1P18405 259 aa13.81□□□□□ -0.2
DDX39A-206ENST00000587730 ARL17AQ8IVW1 177 aa13.81□□□□□ -0.2
DDX39A-206ENST00000587730 C10orf126Q8N4M7 172 aa13.81□□□□□ -0.2
DDX39A-206ENST00000587730 NAV2Q8IVL1 2488 aa13.81□□□□□ -0.2
DDX39A-206ENST00000587730 CYSRT1A8MQ03 144 aa13.8□□□□□ -0.2
DDX39A-206ENST00000587730 FOXI1Q12951 378 aa13.8□□□□□ -0.2
DDX39A-206ENST00000587730 JPT2Q9H910 190 aa13.8□□□□□ -0.2
DDX39A-206ENST00000587730 UTP20O75691 2785 aaKnown RBP13.8□□□□□ -0.2
DDX39A-206ENST00000587730 FAM74A4Q5TZK3 123 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms