RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 CRYBG3Q68DQ2 2970 aa12.59□□□□□ -0.39
PRKCSH-205ENST00000587327 MAP1AP78559 2803 aaPredicted RBP12.59□□□□□ -0.39
PRKCSH-205ENST00000587327 IGLV4-69A0A075B6H9 119 aa12.59□□□□□ -0.39
PRKCSH-205ENST00000587327 VCYO14598 125 aa12.59□□□□□ -0.39
PRKCSH-205ENST00000587327 SAMD13Q5VXD3 122 aa12.59□□□□□ -0.39
PRKCSH-205ENST00000587327 MORN3Q6PF18 240 aaPredicted RBP12.59□□□□□ -0.39
PRKCSH-205ENST00000587327 SCGB1D4Q6XE38 83 aa12.59□□□□□ -0.39
PRKCSH-205ENST00000587327 A0A087WWL8 130 aa12.59□□□□□ -0.39
PRKCSH-205ENST00000587327 B4DSR2 109 aa12.59□□□□□ -0.39
PRKCSH-205ENST00000587327 CD7P09564 240 aa12.59□□□□□ -0.39
PRKCSH-205ENST00000587327 CD300EQ496F6 205 aaPredicted RBP12.59□□□□□ -0.39
PRKCSH-205ENST00000587327 PAPPA-AS1Q5QFB9 102 aa12.59□□□□□ -0.39
PRKCSH-205ENST00000587327 WFDC12Q8WWY7 111 aa12.59□□□□□ -0.39
PRKCSH-205ENST00000587327 KIR2DL4Q99706 377 aa12.59□□□□□ -0.39
PRKCSH-205ENST00000587327 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.59□□□□□ -0.392e-6■■■■□ 20.1
PRKCSH-205ENST00000587327 TRAV12-3A0A0B4J271 114 aa12.58□□□□□ -0.4
PRKCSH-205ENST00000587327 C11orf86A6NJI1 115 aa12.58□□□□□ -0.4
PRKCSH-205ENST00000587327 PMVKQ15126 192 aa12.58□□□□□ -0.4
PRKCSH-205ENST00000587327 GAGE13Q4V321 117 aa12.58□□□□□ -0.4
PRKCSH-205ENST00000587327 KLHL30-AS1Q8NEE0 82 aa12.58□□□□□ -0.4
PRKCSH-205ENST00000587327 PLEKHB2Q96CS7 222 aa12.58□□□□□ -0.4
PRKCSH-205ENST00000587327 TMEM238LA0A1B0GVL6 79 aa12.57□□□□□ -0.4
PRKCSH-205ENST00000587327 A6NJY4 79 aa12.57□□□□□ -0.4
PRKCSH-205ENST00000587327 F5H697 171 aa12.57□□□□□ -0.4
PRKCSH-205ENST00000587327 DSCR9P59020 149 aa12.57□□□□□ -0.4
PRKCSH-205ENST00000587327 TMEM141Q96I45 108 aa12.57□□□□□ -0.4
PRKCSH-205ENST00000587327 RPL39P62891 51 aaKnown RBP12.57□□□□□ -0.4
PRKCSH-205ENST00000587327 SRSF9Q13242 221 aaKnown RBP eCLIP12.57□□□□□ -0.4
PRKCSH-205ENST00000587327 DEFB104AQ8WTQ1 72 aa12.57□□□□□ -0.4
PRKCSH-205ENST00000587327 PRO0461Q9UI25 63 aa12.57□□□□□ -0.4
PRKCSH-205ENST00000587327 CSMD2Q7Z408 3487 aa12.57□□□□□ -0.4
PRKCSH-205ENST00000587327 A0A096LNT2 108 aa12.56□□□□□ -0.4
PRKCSH-205ENST00000587327 SDHAF1A6NFY7 115 aa12.56□□□□□ -0.4
PRKCSH-205ENST00000587327 TMEM238C9JI98 176 aa12.56□□□□□ -0.4
PRKCSH-205ENST00000587327 ETDBQ3ZM63 59 aa12.56□□□□□ -0.4
PRKCSH-205ENST00000587327 SH2D6Q7Z4S9 175 aa12.56□□□□□ -0.4
PRKCSH-205ENST00000587327 TIMM17AQ99595 171 aa12.56□□□□□ -0.4
PRKCSH-205ENST00000587327 PGPEP1Q9NXJ5 209 aa12.56□□□□□ -0.4
PRKCSH-205ENST00000587327 FBN2P35556 2912 aa12.56□□□□□ -0.4
PRKCSH-205ENST00000587327 TRBV27A0A0K0K1C4 114 aa12.56□□□□□ -0.4
PRKCSH-205ENST00000587327 UBE2D1P51668 147 aa12.56□□□□□ -0.4
PRKCSH-205ENST00000587327 EMP1P54849 157 aa12.56□□□□□ -0.4
PRKCSH-205ENST00000587327 J3QR89 54 aa12.55□□□□□ -0.4
PRKCSH-205ENST00000587327 LGALS9O00182 355 aa12.55□□□□□ -0.4
PRKCSH-205ENST00000587327 HERVK_113P61574 105 aa12.55□□□□□ -0.4
PRKCSH-205ENST00000587327 MRPL16Q9NX20 251 aaKnown RBP12.55□□□□□ -0.4
PRKCSH-205ENST00000587327 TRBV6-5A0A0K0K1A5 114 aa12.54□□□□□ -0.4
PRKCSH-205ENST00000587327 PSMB8P28062 276 aa12.54□□□□□ -0.4
PRKCSH-205ENST00000587327 ZNF843Q8N446 348 aa12.54□□□□□ -0.4
PRKCSH-205ENST00000587327 FAM208BQ5VWN6 2430 aa12.54□□□□□ -0.4
PRKCSH-205ENST00000587327 UBR5O95071 2799 aaPredicted RBP12.54□□□□□ -0.4
PRKCSH-205ENST00000587327 IGHV3-16A0A0C4DH30 117 aa12.54□□□□□ -0.4
PRKCSH-205ENST00000587327 TMEM95Q3KNT9 176 aa12.54□□□□□ -0.4
PRKCSH-205ENST00000587327 C9orf85Q96MD7 179 aa12.54□□□□□ -0.4
PRKCSH-205ENST00000587327 ODF3Q96PU9 254 aa12.54□□□□□ -0.4
PRKCSH-205ENST00000587327 ZNF580Q9UK33 172 aa12.54□□□□□ -0.4
PRKCSH-205ENST00000587327 LRRK2Q5S007 2527 aa12.54□□□□□ -0.4
PRKCSH-205ENST00000587327 GATA3P23771 443 aa12.53□□□□□ -0.4
PRKCSH-205ENST00000587327 MTURNQ8N3F0 131 aa12.53□□□□□ -0.4
PRKCSH-205ENST00000587327 MDFICQ9P1T7 246 aa12.53□□□□□ -0.4
PRKCSH-205ENST00000587327 A0A0J9YY99 117 aa12.53□□□□□ -0.4
PRKCSH-205ENST00000587327 ZNF688P0C7X2 276 aa12.53□□□□□ -0.4
PRKCSH-205ENST00000587327 ZNF876PQ49A33 203 aa12.53□□□□□ -0.4
PRKCSH-205ENST00000587327 FAM74A4Q5TZK3 123 aa12.53□□□□□ -0.4
PRKCSH-205ENST00000587327 ZNRF2Q8NHG8 242 aa12.52□□□□□ -0.4
PRKCSH-205ENST00000587327 SPAG8Q99932 426 aaPredicted RBP12.52□□□□□ -0.4
PRKCSH-205ENST00000587327 ANKRD17O75179 2603 aaKnown RBP12.52□□□□□ -0.41
PRKCSH-205ENST00000587327 A0A0J9YX75 114 aa12.52□□□□□ -0.41
PRKCSH-205ENST00000587327 LINC01356Q8N9X3 169 aa12.52□□□□□ -0.41
PRKCSH-205ENST00000587327 TSSC4Q9Y5U2 329 aaPredicted RBP12.52□□□□□ -0.41
PRKCSH-205ENST00000587327 CSPG4Q6UVK1 2322 aa12.51□□□□□ -0.41
PRKCSH-205ENST00000587327 TRAV12-2A0A075B6T6 113 aa12.51□□□□□ -0.41
PRKCSH-205ENST00000587327 GAGE12HA6NDE8 117 aa12.51□□□□□ -0.41
PRKCSH-205ENST00000587327 M0QY20 66 aa12.51□□□□□ -0.41
PRKCSH-205ENST00000587327 SNRPD3P62318 126 aaKnown RBP12.51□□□□□ -0.41
PRKCSH-205ENST00000587327 TMEM170BQ5T4T1 132 aa12.51□□□□□ -0.41
PRKCSH-205ENST00000587327 Q8N1Y9 231 aa12.51□□□□□ -0.41
PRKCSH-205ENST00000587327 SYT8Q8NBV8 401 aa12.51□□□□□ -0.41
PRKCSH-205ENST00000587327 ZNF256Q9Y2P7 627 aaPredicted RBP12.51□□□□□ -0.41
PRKCSH-205ENST00000587327 POLQO75417 2590 aa12.51□□□□□ -0.41
PRKCSH-205ENST00000587327 TSPAN13O95857 204 aa12.5□□□□□ -0.41
PRKCSH-205ENST00000587327 IGKV3-20P01619 116 aa12.5□□□□□ -0.41
PRKCSH-205ENST00000587327 SIGMAR1Q99720 223 aa12.5□□□□□ -0.41
PRKCSH-205ENST00000587327 TSPEAR-AS2P59090 65 aa12.5□□□□□ -0.41
PRKCSH-205ENST00000587327 MAPK1IP1LQ8NDC0 245 aa12.5□□□□□ -0.41
PRKCSH-205ENST00000587327 DLX4Q92988 240 aaPredicted RBP12.5□□□□□ -0.41
PRKCSH-205ENST00000587327 USP9YO00507 2555 aaPredicted RBP12.49□□□□□ -0.41
PRKCSH-205ENST00000587327 IGHV4-59P01825 116 aa12.49□□□□□ -0.41
PRKCSH-205ENST00000587327 AZU1P20160 251 aa12.49□□□□□ -0.41
PRKCSH-205ENST00000587327 ZNF56Q15929 161 aa12.49□□□□□ -0.41
PRKCSH-205ENST00000587327 DEFB112Q30KQ8 113 aa12.49□□□□□ -0.41
PRKCSH-205ENST00000587327 SLC25A29Q8N8R3 303 aa12.49□□□□□ -0.41
PRKCSH-205ENST00000587327 GTSF1LQ9H1H1 148 aa12.49□□□□□ -0.41
PRKCSH-205ENST00000587327 K7EQG2 157 aa12.49□□□□□ -0.41
PRKCSH-205ENST00000587327 C10orf99Q6UWK7 81 aa12.49□□□□□ -0.41
PRKCSH-205ENST00000587327 NDUFA11Q86Y39 141 aa12.49□□□□□ -0.41
PRKCSH-205ENST00000587327 APOMO95445 188 aa12.48□□□□□ -0.41
PRKCSH-205ENST00000587327 NSUN5P1Q3KNT7 163 aa12.48□□□□□ -0.41
PRKCSH-205ENST00000587327 CFAP126Q5VTH2 177 aa12.48□□□□□ -0.41
PRKCSH-205ENST00000587327 SPATA25Q9BR10 227 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms