RNA–Protein interactions for RNA: ENST00000586499.5

TPM4-204, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-204ENST00000586499 RAB19A4D1S5 217 aa12.87□□□□□ -0.35
TPM4-204ENST00000586499 GTSF1LQ9H1H1 148 aa12.87□□□□□ -0.35
TPM4-204ENST00000586499 MSRB1Q9NZV6 116 aa12.87□□□□□ -0.35
TPM4-204ENST00000586499 TRAV8-6A0A0B4J262 113 aa12.86□□□□□ -0.35
TPM4-204ENST00000586499 MUC21A0A0G2JKD1 596 aa12.86□□□□□ -0.35
TPM4-204ENST00000586499 MUC21A0A140T8X8 626 aa12.86□□□□□ -0.35
TPM4-204ENST00000586499 LINC00694P0DN24 101 aa12.86□□□□□ -0.35
TPM4-204ENST00000586499 CENPWQ5EE01 88 aa12.86□□□□□ -0.35
TPM4-204ENST00000586499 ZFP82Q8N141 532 aa12.86□□□□□ -0.35
TPM4-204ENST00000586499 OR10AG1Q8NH19 301 aa12.86□□□□□ -0.35
TPM4-204ENST00000586499 RHODO00212 210 aa12.85□□□□□ -0.35
TPM4-204ENST00000586499 IGLV2-8P01709 118 aa12.85□□□□□ -0.35
TPM4-204ENST00000586499 MEF2BQ02080 365 aaPredicted RBP12.85□□□□□ -0.35
TPM4-204ENST00000586499 LELP1Q5T871 98 aa12.85□□□□□ -0.35
TPM4-204ENST00000586499 DNAH5Q8TE73 4624 aa12.84□□□□□ -0.35
TPM4-204ENST00000586499 K7EP13 123 aa12.84□□□□□ -0.35
TPM4-204ENST00000586499 IGHV3-30P01768 117 aa12.84□□□□□ -0.35
TPM4-204ENST00000586499 IGHV3-33P01772 117 aa12.84□□□□□ -0.35
TPM4-204ENST00000586499 IGHV3-30-3P0DP02 117 aa12.84□□□□□ -0.35
TPM4-204ENST00000586499 IGHV3-30-5P0DP03 117 aa12.84□□□□□ -0.35
TPM4-204ENST00000586499 FUSP35637 526 aaKnown RBP eCLIP12.84□□□□□ -0.35
TPM4-204ENST00000586499 SSTP61278 116 aa12.84□□□□□ -0.35
TPM4-204ENST00000586499 NFE4Q86UQ8 179 aa12.84□□□□□ -0.35
TPM4-204ENST00000586499 A0A1B0GVG6 124 aa12.83□□□□□ -0.36
TPM4-204ENST00000586499 CXCL1P09341 107 aa12.83□□□□□ -0.36
TPM4-204ENST00000586499 BCL2P10415 239 aa12.83□□□□□ -0.36
TPM4-204ENST00000586499 LINC01556Q5JQF7 62 aa12.83□□□□□ -0.36
TPM4-204ENST00000586499 Q8N3U1 123 aa12.83□□□□□ -0.36
TPM4-204ENST00000586499 SSBP4Q9BWG4 385 aaPredicted RBP12.83□□□□□ -0.36
TPM4-204ENST00000586499 MED9Q9NWA0 146 aa12.83□□□□□ -0.36
TPM4-204ENST00000586499 SNAI2O43623 268 aa12.82□□□□□ -0.36
TPM4-204ENST00000586499 IFNA1P01562 189 aa12.82□□□□□ -0.36
TPM4-204ENST00000586499 ALKAL2Q6UX46 152 aa12.82□□□□□ -0.36
TPM4-204ENST00000586499 C10orf126Q8N4M7 172 aa12.82□□□□□ -0.36
TPM4-204ENST00000586499 TRBV20OR9-2A0A075B6H5 130 aa12.81□□□□□ -0.36
TPM4-204ENST00000586499 PDE6DO43924 150 aa12.81□□□□□ -0.36
TPM4-204ENST00000586499 GZMBP10144 247 aa12.81□□□□□ -0.36
TPM4-204ENST00000586499 VAX2Q9UIW0 290 aa12.81□□□□□ -0.36
TPM4-204ENST00000586499 HSPG2P98160 4391 aa12.81□□□□□ -0.36
TPM4-204ENST00000586499 IBA57-AS1B1ANH7 110 aa12.8□□□□□ -0.36
TPM4-204ENST00000586499 OR5AL1P0C617 328 aa12.8□□□□□ -0.36
TPM4-204ENST00000586499 GNG4P50150 75 aa12.8□□□□□ -0.36
TPM4-204ENST00000586499 NKX2-5P52952 324 aaPredicted RBP12.8□□□□□ -0.36
TPM4-204ENST00000586499 SPANXN1Q5VSR9 72 aa12.8□□□□□ -0.36
TPM4-204ENST00000586499 RYR1P21817 5038 aa12.8□□□□□ -0.36
TPM4-204ENST00000586499 A0A087WTM6 91 aa12.79□□□□□ -0.36
TPM4-204ENST00000586499 ERVFC1-1P60608 527 aa12.79□□□□□ -0.36
TPM4-204ENST00000586499 KRTAP17-1Q9BYP8 105 aa12.79□□□□□ -0.36
TPM4-204ENST00000586499 Q9HAA7 133 aa12.79□□□□□ -0.36
TPM4-204ENST00000586499 APOBP04114 4563 aaKnown RBP12.78□□□□□ -0.36
TPM4-204ENST00000586499 C19orf71A6NCJ1 209 aa12.78□□□□□ -0.36
TPM4-204ENST00000586499 RBFOX3A6NFN3 312 aa12.78□□□□□ -0.36
TPM4-204ENST00000586499 OR2D3Q8NGH3 330 aa12.78□□□□□ -0.36
TPM4-204ENST00000586499 DAZAP1Q96EP5 407 aaKnown RBP12.78□□□□□ -0.36
TPM4-204ENST00000586499 BOLA1Q9Y3E2 137 aa12.78□□□□□ -0.36
TPM4-204ENST00000586499 EREGO14944 169 aa12.77□□□□□ -0.37
TPM4-204ENST00000586499 ZNF56Q15929 161 aa12.77□□□□□ -0.37
TPM4-204ENST00000586499 TRBV10-1A0A0K0K1A3 114 aa12.76□□□□□ -0.37
TPM4-204ENST00000586499 RAB4BP61018 213 aa12.76□□□□□ -0.37
TPM4-204ENST00000586499 DAZ4Q86SG3 579 aaKnown RBP12.76□□□□□ -0.37
TPM4-204ENST00000586499 SMIM12Q96EX1 92 aa12.76□□□□□ -0.37
TPM4-204ENST00000586499 TPPP3Q9BW30 176 aa12.76□□□□□ -0.37
TPM4-204ENST00000586499 DAZ3Q9NR90 486 aaKnown RBP12.76□□□□□ -0.37
TPM4-204ENST00000586499 A0A087WWC5 75 aa12.75□□□□□ -0.37
TPM4-204ENST00000586499 CDK2AP2O75956 126 aa12.75□□□□□ -0.37
TPM4-204ENST00000586499 IGLC6P0CF74 106 aa12.75□□□□□ -0.37
TPM4-204ENST00000586499 UBE2D3P61077 147 aa12.75□□□□□ -0.37
TPM4-204ENST00000586499 UBE2D2P62837 147 aa12.75□□□□□ -0.37
TPM4-204ENST00000586499 RPL36AP83881 106 aaKnown RBP12.75□□□□□ -0.37
TPM4-204ENST00000586499 FER1L6-AS1Q8NA97 138 aa12.75□□□□□ -0.37
TPM4-204ENST00000586499 RPL36ALQ969Q0 106 aaKnown RBP12.75□□□□□ -0.37
TPM4-204ENST00000586499 PGPEP1Q9NXJ5 209 aa12.75□□□□□ -0.37
TPM4-204ENST00000586499 KIF25-AS1Q9Y6Z4 181 aa12.75□□□□□ -0.37
TPM4-204ENST00000586499 TRBV7-3A0A075B6L6 115 aa12.74□□□□□ -0.37
TPM4-204ENST00000586499 P01737 135 aa12.74□□□□□ -0.37
TPM4-204ENST00000586499 TAGLN2P37802 199 aaKnown RBP12.74□□□□□ -0.37
TPM4-204ENST00000586499 BLOC1S1P78537 153 aa12.74□□□□□ -0.37
TPM4-204ENST00000586499 NEXN-AS1Q8NBZ9 246 aa12.74□□□□□ -0.37
TPM4-204ENST00000586499 F5H697 171 aa12.73□□□□□ -0.37
TPM4-204ENST00000586499 PSCAO43653 123 aa12.73□□□□□ -0.37
TPM4-204ENST00000586499 RPS20P60866 119 aaKnown RBP12.73□□□□□ -0.37
TPM4-204ENST00000586499 NUDT10Q8NFP7 164 aa12.73□□□□□ -0.37
TPM4-204ENST00000586499 OR10G8Q8NGN5 311 aa12.73□□□□□ -0.37
TPM4-204ENST00000586499 OCC1Q8TAD7 63 aa12.73□□□□□ -0.37
TPM4-204ENST00000586499 NUDT11Q96G61 164 aa12.73□□□□□ -0.37
TPM4-204ENST00000586499 KRTAP4-5Q9BYR2 181 aa12.73□□□□□ -0.37
TPM4-204ENST00000586499 LYPD6BQ8NI32 183 aa12.72□□□□□ -0.37
TPM4-204ENST00000586499 LRCOL1A6NCL2 159 aa12.71□□□□□ -0.37
TPM4-204ENST00000586499 K7EN84 100 aa12.71□□□□□ -0.37
TPM4-204ENST00000586499 SMIM17P0DL12 118 aa12.71□□□□□ -0.37
TPM4-204ENST00000586499 LYZL1Q6UWQ5 148 aa12.71□□□□□ -0.37
TPM4-204ENST00000586499 NIT1Q86X76 327 aa12.71□□□□□ -0.37
TPM4-204ENST00000586499 AP1S3Q96PC3 154 aa12.71□□□□□ -0.37
TPM4-204ENST00000586499 RNASE7Q9H1E1 156 aaKnown RBP12.71□□□□□ -0.37
TPM4-204ENST00000586499 LAGE3Q14657 143 aa12.7□□□□□ -0.38
TPM4-204ENST00000586499 DNAJC30Q96LL9 226 aa12.7□□□□□ -0.38
TPM4-204ENST00000586499 BIN3Q9NQY0 253 aa12.7□□□□□ -0.38
TPM4-204ENST00000586499 XKRY2A2RUG3 117 aa12.69□□□□□ -0.38
TPM4-204ENST00000586499 MGPP08493 103 aa12.69□□□□□ -0.38
TPM4-204ENST00000586499 MAPKAPK5-AS1Q8N8E1 139 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms