RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 MUC5BQ9HC84 5762 aaPredicted RBP0.45□□□□□ -2.34
PPP4R1-227ENST00000583988 TRAV12-3A0A0B4J271 114 aa0.45□□□□□ -2.34
PPP4R1-227ENST00000583988 M0R129 80 aa0.45□□□□□ -2.34
PPP4R1-227ENST00000583988 NPFFO15130 113 aa0.45□□□□□ -2.34
PPP4R1-227ENST00000583988 IFNA17P01571 189 aa0.45□□□□□ -2.34
PPP4R1-227ENST00000583988 PIRTP0C851 137 aa0.45□□□□□ -2.34
PPP4R1-227ENST00000583988 ELOF1P60002 83 aaKnown RBP0.45□□□□□ -2.34
PPP4R1-227ENST00000583988 RPS25P62851 125 aaKnown RBP0.45□□□□□ -2.34
PPP4R1-227ENST00000583988 S100A12P80511 92 aa0.45□□□□□ -2.34
PPP4R1-227ENST00000583988 MIC13Q5XKP0 118 aa0.45□□□□□ -2.34
PPP4R1-227ENST00000583988 SLC48A1Q6P1K1 146 aa0.45□□□□□ -2.34
PPP4R1-227ENST00000583988 Q6ZUT4 128 aa0.45□□□□□ -2.34
PPP4R1-227ENST00000583988 KCNRGQ8N5I3 272 aa0.45□□□□□ -2.34
PPP4R1-227ENST00000583988 PRR15LQ9BU68 103 aa0.45□□□□□ -2.34
PPP4R1-227ENST00000583988 TMEM191AQ9H0A3 160 aa0.45□□□□□ -2.34
PPP4R1-227ENST00000583988 RPRMQ9NS64 109 aa0.45□□□□□ -2.34
PPP4R1-227ENST00000583988 CCDC167Q9P0B6 97 aa0.45□□□□□ -2.34
PPP4R1-227ENST00000583988 CACNA1EQ15878 2313 aa0.45□□□□□ -2.34
PPP4R1-227ENST00000583988 DAPK1P53355 1430 aa0.45□□□□□ -2.34
PPP4R1-227ENST00000583988 MED13LQ71F56 2210 aa0.45□□□□□ -2.34
PPP4R1-227ENST00000583988 TMEM2Q9UHN6 1383 aa0.45□□□□□ -2.34
PPP4R1-227ENST00000583988 PTPRMP28827 1452 aa0.44□□□□□ -2.34
PPP4R1-227ENST00000583988 IL5P05113 134 aa0.44□□□□□ -2.34
PPP4R1-227ENST00000583988 CCL3L1P16619 93 aa0.44□□□□□ -2.34
PPP4R1-227ENST00000583988 EMX2Q04743 252 aa0.44□□□□□ -2.34
PPP4R1-227ENST00000583988 CCDC58Q4VC31 144 aa0.44□□□□□ -2.34
PPP4R1-227ENST00000583988 C4orf33Q8N1A6 199 aa0.44□□□□□ -2.34
PPP4R1-227ENST00000583988 COPS9Q8WXC6 57 aa0.44□□□□□ -2.34
PPP4R1-227ENST00000583988 SPTSSAQ969W0 71 aa0.44□□□□□ -2.34
PPP4R1-227ENST00000583988 BPESC1Q9GZL8 116 aa0.44□□□□□ -2.34
PPP4R1-227ENST00000583988 SCP2D1Q9UJQ7 156 aa0.44□□□□□ -2.34
PPP4R1-227ENST00000583988 SOGA1O94964 1423 aa0.44□□□□□ -2.34
PPP4R1-227ENST00000583988 TANC1Q9C0D5 1861 aa0.44□□□□□ -2.34
PPP4R1-227ENST00000583988 PIGBOS1A0A0B4J2F0 54 aa0.43□□□□□ -2.34
PPP4R1-227ENST00000583988 SNCGO76070 127 aa0.43□□□□□ -2.34
PPP4R1-227ENST00000583988 ARPC4P59998 168 aa0.43□□□□□ -2.34
PPP4R1-227ENST00000583988 C9orf116Q5BN46 136 aaPredicted RBP0.43□□□□□ -2.34
PPP4R1-227ENST00000583988 C20orf197Q8N268 126 aa0.43□□□□□ -2.34
PPP4R1-227ENST00000583988 COX7B2Q8TF08 81 aa0.43□□□□□ -2.34
PPP4R1-227ENST00000583988 TMEM242Q9NWH2 141 aa0.43□□□□□ -2.34
PPP4R1-227ENST00000583988 V9GYV3 84 aa0.43□□□□□ -2.34
PPP4R1-227ENST00000583988 MYO7AQ13402 2215 aa0.43□□□□□ -2.34
PPP4R1-227ENST00000583988 PLXNA1Q9UIW2 1896 aa0.43□□□□□ -2.34
PPP4R1-227ENST00000583988 CDK13Q14004 1512 aaKnown RBP0.43□□□□□ -2.34
PPP4R1-227ENST00000583988 APCP25054 2843 aa0.42□□□□□ -2.34
PPP4R1-227ENST00000583988 ADGRB1O14514 1584 aa0.42□□□□□ -2.34
PPP4R1-227ENST00000583988 TRBV7-1A0A0A6YYK4 115 aa0.42□□□□□ -2.34
PPP4R1-227ENST00000583988 NDUFB6O95139 128 aa0.42□□□□□ -2.34
PPP4R1-227ENST00000583988 APODP05090 189 aa0.42□□□□□ -2.34
PPP4R1-227ENST00000583988 NPC2P61916 151 aa0.42□□□□□ -2.34
PPP4R1-227ENST00000583988 SMIM11BQ8TCY0 68 aa0.42□□□□□ -2.34
PPP4R1-227ENST00000583988 TSC22D3Q99576 134 aa0.42□□□□□ -2.34
PPP4R1-227ENST00000583988 USP24Q9UPU5 2620 aa0.41□□□□□ -2.34
PPP4R1-227ENST00000583988 F5P12259 2224 aa0.41□□□□□ -2.34
PPP4R1-227ENST00000583988 PARP14Q460N5 1801 aa0.41□□□□□ -2.34
PPP4R1-227ENST00000583988 MYOM3Q5VTT5 1437 aa0.41□□□□□ -2.34
PPP4R1-227ENST00000583988 AKAP11Q9UKA4 1901 aa0.41□□□□□ -2.34
PPP4R1-227ENST00000583988 PRH1P02810 166 aa0.41□□□□□ -2.34
PPP4R1-227ENST00000583988 SMIM6P0DI80 62 aa0.41□□□□□ -2.34
PPP4R1-227ENST00000583988 SPINK6Q6UWN8 80 aa0.41□□□□□ -2.34
PPP4R1-227ENST00000583988 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.41□□□□□ -2.34
PPP4R1-227ENST00000583988 VMO1Q7Z5L0 202 aa0.41□□□□□ -2.34
PPP4R1-227ENST00000583988 LAMB1P07942 1786 aa0.41□□□□□ -2.34
PPP4R1-227ENST00000583988 NRXN2Q9P2S2 1712 aa0.41□□□□□ -2.34
PPP4R1-227ENST00000583988 JMJD1CQ15652 2540 aa0.4□□□□□ -2.34
PPP4R1-227ENST00000583988 MYH9P35579 1960 aaKnown RBP0.4□□□□□ -2.35
PPP4R1-227ENST00000583988 KDM6BO15054 1643 aa0.4□□□□□ -2.35
PPP4R1-227ENST00000583988 FAM92AA1XBS5 289 aa0.4□□□□□ -2.35
PPP4R1-227ENST00000583988 PHGR1C9JFL3 82 aa0.4□□□□□ -2.35
PPP4R1-227ENST00000583988 HMGN1P05114 100 aa0.4□□□□□ -2.35
PPP4R1-227ENST00000583988 CBLN1P23435 193 aa0.4□□□□□ -2.35
PPP4R1-227ENST00000583988 UBE2G1P62253 170 aa0.4□□□□□ -2.35
PPP4R1-227ENST00000583988 ARL11Q969Q4 196 aa0.4□□□□□ -2.35
PPP4R1-227ENST00000583988 SMR3AQ99954 134 aa0.4□□□□□ -2.35
PPP4R1-227ENST00000583988 FAM107BQ9H098 131 aa0.4□□□□□ -2.35
PPP4R1-227ENST00000583988 TNS1Q9HBL0 1735 aaKnown RBP0.4□□□□□ -2.35
PPP4R1-227ENST00000583988 PHIPQ8WWQ0 1821 aa0.4□□□□□ -2.35
PPP4R1-227ENST00000583988 GRIN2AQ12879 1464 aa0.4□□□□□ -2.35
PPP4R1-227ENST00000583988 LAMC3Q9Y6N6 1575 aa0.4□□□□□ -2.35
PPP4R1-227ENST00000583988 CADP27708 2225 aa0.4□□□□□ -2.35
PPP4R1-227ENST00000583988 SPEF2Q9C093 1822 aa0.39□□□□□ -2.35
PPP4R1-227ENST00000583988 MDN1Q9NU22 5596 aa0.39□□□□□ -2.35
PPP4R1-227ENST00000583988 TRBV10-3A0A0K0K1G6 114 aa0.39□□□□□ -2.35
PPP4R1-227ENST00000583988 FAM25AB3EWG3 89 aa0.39□□□□□ -2.35
PPP4R1-227ENST00000583988 FAM25CB3EWG5 89 aa0.39□□□□□ -2.35
PPP4R1-227ENST00000583988 FAM25GB3EWG6 89 aa0.39□□□□□ -2.35
PPP4R1-227ENST00000583988 ACYP2P14621 99 aa0.39□□□□□ -2.35
PPP4R1-227ENST00000583988 SELENOWP63302 87 aa0.39□□□□□ -2.35
PPP4R1-227ENST00000583988 ZNF818PQ6ZRF7 136 aa0.39□□□□□ -2.35
PPP4R1-227ENST00000583988 PDCD10Q9BUL8 212 aa0.39□□□□□ -2.35
PPP4R1-227ENST00000583988 DOCK11Q5JSL3 2073 aa0.38□□□□□ -2.35
PPP4R1-227ENST00000583988 ZNF518AQ6AHZ1 1483 aa0.38□□□□□ -2.35
PPP4R1-227ENST00000583988 A0A087WTM6 91 aa0.38□□□□□ -2.35
PPP4R1-227ENST00000583988 GVQW2A0A096LPI5 108 aaPredicted RBP0.38□□□□□ -2.35
PPP4R1-227ENST00000583988 APOC4-APOC2K7ER74 178 aa0.38□□□□□ -2.35
PPP4R1-227ENST00000583988 PITX3O75364 302 aa0.38□□□□□ -2.35
PPP4R1-227ENST00000583988 SPTSSBQ8NFR3 76 aa0.38□□□□□ -2.35
PPP4R1-227ENST00000583988 C10orf82Q8WW14 230 aa0.38□□□□□ -2.35
PPP4R1-227ENST00000583988 SDF2Q99470 211 aa0.38□□□□□ -2.35
PPP4R1-227ENST00000583988 SEC11CQ9BY50 192 aa0.38□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms