RNA–Protein interactions for RNA: ENST00000582594.5

PPP4R1-222, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene PPP4R1, Length 2,982 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-222ENST00000582594 EIF4EBP3O60516 100 aaPredicted RBP7.18□□□□□ -1.26
PPP4R1-222ENST00000582594 LGALS3P17931 250 aaKnown RBP7.18□□□□□ -1.26
PPP4R1-222ENST00000582594 C1orf122Q6ZSJ8 110 aa7.18□□□□□ -1.26
PPP4R1-222ENST00000582594 SLC25A29Q8N8R3 303 aa7.18□□□□□ -1.26
PPP4R1-222ENST00000582594 ANAPC13Q9BS18 74 aa7.18□□□□□ -1.26
PPP4R1-222ENST00000582594 SS18L2Q9UHA2 77 aa7.18□□□□□ -1.26
PPP4R1-222ENST00000582594 CEP295Q9C0D2 2601 aa7.18□□□□□ -1.26
PPP4R1-222ENST00000582594 TRAV41A0A0B4J266 112 aa7.18□□□□□ -1.26
PPP4R1-222ENST00000582594 J3QQQ9 107 aa7.18□□□□□ -1.26
PPP4R1-222ENST00000582594 SLC25A20O43772 301 aa7.18□□□□□ -1.26
PPP4R1-222ENST00000582594 LINC00315P59091 139 aa7.18□□□□□ -1.26
PPP4R1-222ENST00000582594 BEX4Q9NWD9 120 aaPredicted RBP7.18□□□□□ -1.26
PPP4R1-222ENST00000582594 ERG28Q9UKR5 140 aa7.18□□□□□ -1.26
PPP4R1-222ENST00000582594 LENEPQ9Y5L5 61 aa7.18□□□□□ -1.26
PPP4R1-222ENST00000582594 TRBV20-1A0A075B6N2 111 aa7.17□□□□□ -1.26
PPP4R1-222ENST00000582594 SDHAF1A6NFY7 115 aa7.17□□□□□ -1.26
PPP4R1-222ENST00000582594 C5orf56Q8N8D9 126 aa7.17□□□□□ -1.26
PPP4R1-222ENST00000582594 CELSR1Q9NYQ6 3014 aa7.17□□□□□ -1.26
PPP4R1-222ENST00000582594 EDN2P20800 178 aa7.17□□□□□ -1.26
PPP4R1-222ENST00000582594 UBE2E1P51965 193 aa7.17□□□□□ -1.26
PPP4R1-222ENST00000582594 Q1RN00 199 aa7.17□□□□□ -1.26
PPP4R1-222ENST00000582594 C11orf71Q6IPW1 123 aa7.17□□□□□ -1.26
PPP4R1-222ENST00000582594 KIF25-AS1Q9Y6Z4 181 aa7.17□□□□□ -1.26
PPP4R1-222ENST00000582594 COL6A6A6NMZ7 2263 aa7.17□□□□□ -1.26
PPP4R1-222ENST00000582594 SOCS3O14543 225 aa7.17□□□□□ -1.26
PPP4R1-222ENST00000582594 IGHV4-39P01824 125 aa7.17□□□□□ -1.26
PPP4R1-222ENST00000582594 POLR2KP53803 58 aaKnown RBP7.17□□□□□ -1.26
PPP4R1-222ENST00000582594 ZFAND6Q6FIF0 208 aa7.17□□□□□ -1.26
PPP4R1-222ENST00000582594 SBSPONQ8IVN8 264 aa7.17□□□□□ -1.26
PPP4R1-222ENST00000582594 AMELXQ99217 191 aa7.17□□□□□ -1.26
PPP4R1-222ENST00000582594 ZNF580Q9UK33 172 aa7.17□□□□□ -1.26
PPP4R1-222ENST00000582594 TRAV12-3A0A0B4J271 114 aa7.16□□□□□ -1.26
PPP4R1-222ENST00000582594 IGHV1-69DA0A0B4J2H0 117 aa7.16□□□□□ -1.26
PPP4R1-222ENST00000582594 PPP1R17O96001 155 aa7.16□□□□□ -1.26
PPP4R1-222ENST00000582594 ELANEP08246 267 aa7.16□□□□□ -1.26
PPP4R1-222ENST00000582594 PAPPA-AS1Q5QFB9 102 aa7.16□□□□□ -1.26
PPP4R1-222ENST00000582594 SPTAN1Q13813 2472 aaKnown RBP7.16□□□□□ -1.26
PPP4R1-222ENST00000582594 PTPRQQ9UMZ3 2332 aa7.16□□□□□ -1.26
PPP4R1-222ENST00000582594 ADARB2-AS1A8MUL3 147 aa7.16□□□□□ -1.26
PPP4R1-222ENST00000582594 VCYO14598 125 aa7.16□□□□□ -1.26
PPP4R1-222ENST00000582594 IGKV3-20P01619 116 aa7.16□□□□□ -1.26
PPP4R1-222ENST00000582594 FAM159AQ6UWV7 190 aa7.16□□□□□ -1.26
PPP4R1-222ENST00000582594 MUSTN1Q8IVN3 82 aa7.16□□□□□ -1.26
PPP4R1-222ENST00000582594 TEX29Q8N6K0 151 aa7.16□□□□□ -1.26
PPP4R1-222ENST00000582594 UBTD1Q9HAC8 227 aa7.16□□□□□ -1.26
PPP4R1-222ENST00000582594 ATRXP46100 2492 aa7.15□□□□□ -1.26
PPP4R1-222ENST00000582594 NPFFO15130 113 aa7.15□□□□□ -1.26
PPP4R1-222ENST00000582594 ZNF876PQ49A33 203 aa7.15□□□□□ -1.26
PPP4R1-222ENST00000582594 NTN5Q8WTR8 489 aaPredicted RBP7.15□□□□□ -1.26
PPP4R1-222ENST00000582594 A0A1W2PPR1 153 aa7.15□□□□□ -1.27
PPP4R1-222ENST00000582594 IGHV3-33P01772 117 aa7.15□□□□□ -1.27
PPP4R1-222ENST00000582594 ZNF56Q15929 161 aa7.15□□□□□ -1.27
PPP4R1-222ENST00000582594 LY6EQ16553 131 aa7.15□□□□□ -1.27
PPP4R1-222ENST00000582594 KLK9Q2XQG4 91 aa7.15□□□□□ -1.27
PPP4R1-222ENST00000582594 TMEM141Q96I45 108 aa7.15□□□□□ -1.27
PPP4R1-222ENST00000582594 FAM19A4Q96LR4 140 aa7.15□□□□□ -1.27
PPP4R1-222ENST00000582594 KLK9Q9UKQ9 250 aa7.15□□□□□ -1.27
PPP4R1-222ENST00000582594 CRLF1O75462 422 aa7.14□□□□□ -1.27
PPP4R1-222ENST00000582594 MED14OSP0DP75 135 aa7.14□□□□□ -1.27
PPP4R1-222ENST00000582594 BRD3OSQ6XYD6 125 aa7.14□□□□□ -1.27
PPP4R1-222ENST00000582594 B5MCH6 92 aa7.14□□□□□ -1.27
PPP4R1-222ENST00000582594 TMEM263Q8WUH6 116 aaKnown RBP7.14□□□□□ -1.27
PPP4R1-222ENST00000582594 TIMM17AQ99595 171 aa7.14□□□□□ -1.27
PPP4R1-222ENST00000582594 RHPN1-AS1Q9BWJ2 59 aa7.14□□□□□ -1.27
PPP4R1-222ENST00000582594 TRAV12-2A0A075B6T6 113 aa7.14□□□□□ -1.27
PPP4R1-222ENST00000582594 IGHV4OR15-8A0A075B7B6 117 aa7.14□□□□□ -1.27
PPP4R1-222ENST00000582594 A0A087WW49 117 aa7.14□□□□□ -1.27
PPP4R1-222ENST00000582594 ADORA2A-AS1P86434 159 aa7.14□□□□□ -1.27
PPP4R1-222ENST00000582594 TRAV4A0A0B4J268 109 aa7.13□□□□□ -1.27
PPP4R1-222ENST00000582594 A0A0J9YXV3 536 aa7.13□□□□□ -1.27
PPP4R1-222ENST00000582594 FAM223BA6NKX1 122 aa7.13□□□□□ -1.27
PPP4R1-222ENST00000582594 NDUFA4O00483 81 aa7.13□□□□□ -1.27
PPP4R1-222ENST00000582594 PF4V1P10720 104 aa7.13□□□□□ -1.27
PPP4R1-222ENST00000582594 FAM223AQ8IWN6 122 aa7.13□□□□□ -1.27
PPP4R1-222ENST00000582594 POM121L12Q8N7R1 296 aa7.13□□□□□ -1.27
PPP4R1-222ENST00000582594 VCX2Q9H322 139 aa7.13□□□□□ -1.27
PPP4R1-222ENST00000582594 TMEM262E9PQX1 116 aa7.13□□□□□ -1.27
PPP4R1-222ENST00000582594 NPC2P61916 151 aa7.13□□□□□ -1.27
PPP4R1-222ENST00000582594 BPESC1Q9GZL8 116 aa7.13□□□□□ -1.27
PPP4R1-222ENST00000582594 MDFICQ9P1T7 246 aa7.13□□□□□ -1.27
PPP4R1-222ENST00000582594 SORL1Q92673 2214 aa7.13□□□□□ -1.27
PPP4R1-222ENST00000582594 TEX49A0A1B0GTD5 131 aa7.12□□□□□ -1.27
PPP4R1-222ENST00000582594 TMEM223A0PJW6 202 aa7.12□□□□□ -1.27
PPP4R1-222ENST00000582594 LEPROTO15243 131 aa7.12□□□□□ -1.27
PPP4R1-222ENST00000582594 NXPH4O95158 308 aa7.12□□□□□ -1.27
PPP4R1-222ENST00000582594 Q8N1Y9 231 aa7.12□□□□□ -1.27
PPP4R1-222ENST00000582594 CITED1Q99966 193 aa7.12□□□□□ -1.27
PPP4R1-222ENST00000582594 MOB4Q9Y3A3 225 aa7.12□□□□□ -1.27
PPP4R1-222ENST00000582594 SNCGO76070 127 aa7.12□□□□□ -1.27
PPP4R1-222ENST00000582594 ZNF22P17026 224 aaPredicted RBP7.12□□□□□ -1.27
PPP4R1-222ENST00000582594 FBXL19-AS1Q494R0 122 aa7.12□□□□□ -1.27
PPP4R1-222ENST00000582594 NHLRC4P0CG21 123 aaPredicted RBP7.11□□□□□ -1.27
PPP4R1-222ENST00000582594 GAGE2BQ13066 116 aa7.11□□□□□ -1.27
PPP4R1-222ENST00000582594 GAGE2EQ4V326 116 aa7.11□□□□□ -1.27
PPP4R1-222ENST00000582594 RNASE13Q5GAN3 156 aaKnown RBP7.11□□□□□ -1.27
PPP4R1-222ENST00000582594 SPXQ9BT56 116 aa7.11□□□□□ -1.27
PPP4R1-222ENST00000582594 GAGE2DQ9UEU5 116 aa7.11□□□□□ -1.27
PPP4R1-222ENST00000582594 VPS13CQ709C8 3753 aa7.11□□□□□ -1.27
PPP4R1-222ENST00000582594 TRBV27A0A0K0K1C4 114 aa7.11□□□□□ -1.27
PPP4R1-222ENST00000582594 PRSS2P07478 247 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms