RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 TRAV34A0A0B4J273 112 aa7.07□□□□□ -1.28
GGA3-209ENST00000580646 PLAC8L1A1L4L8 177 aa7.07□□□□□ -1.28
GGA3-209ENST00000580646 LYRM9A8MSI8 78 aa7.07□□□□□ -1.28
GGA3-209ENST00000580646 TMEM250H0YL14 139 aa7.07□□□□□ -1.28
GGA3-209ENST00000580646 LY6G6CO95867 125 aa7.07□□□□□ -1.28
GGA3-209ENST00000580646 TYMSP04818 313 aa7.07□□□□□ -1.28
GGA3-209ENST00000580646 PFN1P07737 140 aaKnown RBP7.07□□□□□ -1.28
GGA3-209ENST00000580646 KCNIP4Q6PIL6 250 aa7.07□□□□□ -1.28
GGA3-209ENST00000580646 KCNS1Q96KK3 526 aa7.07□□□□□ -1.28
GGA3-209ENST00000580646 SGK494Q96LW2 274 aa7.07□□□□□ -1.28
GGA3-209ENST00000580646 TP53TG3Q9ULZ0 132 aa7.07□□□□□ -1.28
GGA3-209ENST00000580646 SPART-AS1P0CW21 52 aa7.06□□□□□ -1.28
GGA3-209ENST00000580646 AZU1P20160 251 aa7.06□□□□□ -1.28
GGA3-209ENST00000580646 VAMP3Q15836 100 aa7.06□□□□□ -1.28
GGA3-209ENST00000580646 FAM159AQ6UWV7 190 aa7.06□□□□□ -1.28
GGA3-209ENST00000580646 NIT1Q86X76 327 aa7.06□□□□□ -1.28
GGA3-209ENST00000580646 C8orf49Q96NF6 230 aa7.06□□□□□ -1.28
GGA3-209ENST00000580646 MLST8Q9BVC4 326 aa7.06□□□□□ -1.28
GGA3-209ENST00000580646 DKK2Q9UBU2 259 aa7.06□□□□□ -1.28
GGA3-209ENST00000580646 KIAA1109Q2LD37 5005 aa7.06□□□□□ -1.28
GGA3-209ENST00000580646 TRGV11A0A075B6L2 103 aa7.05□□□□□ -1.28
GGA3-209ENST00000580646 FABP5P3A8MUU1 101 aa7.05□□□□□ -1.28
GGA3-209ENST00000580646 ZNF80P51504 273 aaPredicted RBP7.05□□□□□ -1.28
GGA3-209ENST00000580646 TCL1AP56279 114 aa7.05□□□□□ -1.28
GGA3-209ENST00000580646 DAZ2Q13117 558 aaKnown RBP7.05□□□□□ -1.28
GGA3-209ENST00000580646 C11orf72Q8NBR9 251 aa7.05□□□□□ -1.28
GGA3-209ENST00000580646 ANAPC16Q96DE5 110 aa7.05□□□□□ -1.28
GGA3-209ENST00000580646 TIMM8BQ9Y5J9 83 aaPredicted RBP7.05□□□□□ -1.28
GGA3-209ENST00000580646 FRAS1Q86XX4 4008 aa7.04□□□□□ -1.28
GGA3-209ENST00000580646 SNURFLB1AK76 121 aa7.04□□□□□ -1.28
GGA3-209ENST00000580646 PRM2P04554 102 aa7.04□□□□□ -1.28
GGA3-209ENST00000580646 ESDP10768 282 aa7.04□□□□□ -1.28
GGA3-209ENST00000580646 HTN1P15515 57 aa7.04□□□□□ -1.28
GGA3-209ENST00000580646 ZNF415Q09FC8 603 aa7.04□□□□□ -1.28
GGA3-209ENST00000580646 FAM162BQ5T6X4 162 aa7.04□□□□□ -1.28
GGA3-209ENST00000580646 FAM222AQ5U5X8 452 aa7.04□□□□□ -1.28
GGA3-209ENST00000580646 Q6ZQT7 251 aa7.04□□□□□ -1.28
GGA3-209ENST00000580646 BAGE2Q86Y30 109 aa7.04□□□□□ -1.28
GGA3-209ENST00000580646 LINC00612Q8N6U2 182 aa7.04□□□□□ -1.28
GGA3-209ENST00000580646 ZC2HC1AQ96GY0 325 aa7.04□□□□□ -1.28
GGA3-209ENST00000580646 C18orf15Q96N68 181 aa7.04□□□□□ -1.28
GGA3-209ENST00000580646 SSBP4Q9BWG4 385 aaPredicted RBP7.04□□□□□ -1.28
GGA3-209ENST00000580646 NAT8Q9UHE5 227 aa7.04□□□□□ -1.28
GGA3-209ENST00000580646 CELA1Q9UNI1 258 aa7.04□□□□□ -1.28
GGA3-209ENST00000580646 C9JCJ5 164 aa7.03□□□□□ -1.28
GGA3-209ENST00000580646 SMIM17P0DL12 118 aa7.03□□□□□ -1.28
GGA3-209ENST00000580646 CRIP1P50238 77 aa7.03□□□□□ -1.28
GGA3-209ENST00000580646 C12orf74Q32Q52 190 aa7.03□□□□□ -1.28
GGA3-209ENST00000580646 LGALS9BQ3B8N2 356 aa7.03□□□□□ -1.28
GGA3-209ENST00000580646 SPXQ9BT56 116 aa7.03□□□□□ -1.28
GGA3-209ENST00000580646 DERL1Q9BUN8 251 aa7.03□□□□□ -1.28
GGA3-209ENST00000580646 SDF2L1Q9HCN8 221 aa7.03□□□□□ -1.28
GGA3-209ENST00000580646 IGLV2-8P01709 118 aa7.02□□□□□ -1.29
GGA3-209ENST00000580646 GNG4P50150 75 aa7.02□□□□□ -1.29
GGA3-209ENST00000580646 EMP1P54849 157 aa7.02□□□□□ -1.29
GGA3-209ENST00000580646 TCTAP57738 103 aa7.02□□□□□ -1.29
GGA3-209ENST00000580646 LINC01559Q495D7 138 aa7.02□□□□□ -1.29
GGA3-209ENST00000580646 CENPWQ5EE01 88 aa7.02□□□□□ -1.29
GGA3-209ENST00000580646 MUC21Q5SSG8 566 aa7.02□□□□□ -1.29
GGA3-209ENST00000580646 LGALS9CQ6DKI2 356 aa7.02□□□□□ -1.29
GGA3-209ENST00000580646 Q6ZN92 141 aa7.02□□□□□ -1.29
GGA3-209ENST00000580646 STPG4Q8N801 248 aa7.02□□□□□ -1.29
GGA3-209ENST00000580646 C11orf21Q9P2W6 132 aa7.02□□□□□ -1.29
GGA3-209ENST00000580646 PAM16Q9Y3D7 125 aa7.02□□□□□ -1.29
GGA3-209ENST00000580646 MUC4Q99102 2169 aa7.02□□□□□ -1.29
GGA3-209ENST00000580646 TRBV20OR9-2A0A075B6H5 130 aa7.01□□□□□ -1.29
GGA3-209ENST00000580646 TRAV9-1A0A075B6T8 112 aa7.01□□□□□ -1.29
GGA3-209ENST00000580646 TRAV10A0A0B4J240 114 aa7.01□□□□□ -1.29
GGA3-209ENST00000580646 IGKV3D-20A0A0C4DH25 116 aa7.01□□□□□ -1.29
GGA3-209ENST00000580646 IGHV3-16A0A0C4DH30 117 aa7.01□□□□□ -1.29
GGA3-209ENST00000580646 IGLL5B9A064 214 aa7.01□□□□□ -1.29
GGA3-209ENST00000580646 SPINK4O60575 86 aa7.01□□□□□ -1.29
GGA3-209ENST00000580646 SH2D1AO60880 128 aa7.01□□□□□ -1.29
GGA3-209ENST00000580646 DAD1P61803 113 aa7.01□□□□□ -1.29
GGA3-209ENST00000580646 Q6ZTC4 211 aa7.01□□□□□ -1.29
GGA3-209ENST00000580646 GTF2H5Q6ZYL4 71 aa7.01□□□□□ -1.29
GGA3-209ENST00000580646 PTH2Q96A98 100 aa7.01□□□□□ -1.29
GGA3-209ENST00000580646 PARLQ9H300 379 aa7.01□□□□□ -1.29
GGA3-209ENST00000580646 NOP10Q9NPE3 64 aaKnown RBP7.01□□□□□ -1.29
GGA3-209ENST00000580646 LY96Q9Y6Y9 160 aa7.01□□□□□ -1.29
GGA3-209ENST00000580646 KMT2AQ03164 3969 aa7.01□□□□□ -1.29
GGA3-209ENST00000580646 NACAE9PAV3 2078 aa7□□□□□ -1.29
GGA3-209ENST00000580646 IGLC3P0DOY3 106 aa7□□□□□ -1.29
GGA3-209ENST00000580646 PMCHL1Q16048 86 aa7□□□□□ -1.29
GGA3-209ENST00000580646 SPATA45Q537H7 98 aa7□□□□□ -1.29
GGA3-209ENST00000580646 PIK3CD-AS1Q5SR53 167 aa7□□□□□ -1.29
GGA3-209ENST00000580646 NHLRC2Q8NBF2 726 aa7□□□□□ -1.29
GGA3-209ENST00000580646 RASL10AQ92737 203 aa7□□□□□ -1.29
GGA3-209ENST00000580646 ZNF479Q96JC4 524 aa7□□□□□ -1.29
GGA3-209ENST00000580646 C9orf85Q96MD7 179 aa7□□□□□ -1.29
GGA3-209ENST00000580646 APLNQ9ULZ1 77 aa7□□□□□ -1.29
GGA3-209ENST00000580646 ABCA13Q86UQ4 5058 aa7□□□□□ -1.29
GGA3-209ENST00000580646 VPS13DQ5THJ4 4388 aa7□□□□□ -1.29
GGA3-209ENST00000580646 M0R2P5 195 aa6.99□□□□□ -1.29
GGA3-209ENST00000580646 GNRH2O43555 120 aa6.99□□□□□ -1.29
GGA3-209ENST00000580646 ORM1P02763 201 aa6.99□□□□□ -1.29
GGA3-209ENST00000580646 ATP5G1P05496 136 aa6.99□□□□□ -1.29
GGA3-209ENST00000580646 MED14OSP0DP75 135 aa6.99□□□□□ -1.29
GGA3-209ENST00000580646 CTRLP40313 264 aa6.99□□□□□ -1.29
GGA3-209ENST00000580646 IL36BQ9NZH7 164 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms