RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 CHD9Q3L8U1 2897 aa0□□□□□ -2.41
TOP2A-202ENST00000577541 HRNRQ86YZ3 2850 aaPredicted RBP0□□□□□ -2.41
TOP2A-202ENST00000577541 TRAV12-3A0A0B4J271 114 aa0□□□□□ -2.41
TOP2A-202ENST00000577541 OVOS2A0A0J9YW53 1432 aa0□□□□□ -2.41
TOP2A-202ENST00000577541 TEX49A0A1B0GTD5 131 aa0□□□□□ -2.41
TOP2A-202ENST00000577541 FHAD1B1AJZ9 1412 aa0□□□□□ -2.41
TOP2A-202ENST00000577541 ZNF670-ZNF695F2Z2N8 137 aa0□□□□□ -2.41
TOP2A-202ENST00000577541 SOGA1O94964 1423 aa0□□□□□ -2.41
TOP2A-202ENST00000577541 TSPAN19P0C672 248 aa0□□□□□ -2.41
TOP2A-202ENST00000577541 PIRTP0C851 137 aa0□□□□□ -2.41
TOP2A-202ENST00000577541 FXYD6P3P58550 94 aa0□□□□□ -2.41
TOP2A-202ENST00000577541 OVOS2Q6IE36 1432 aa0□□□□□ -2.41
TOP2A-202ENST00000577541 Q6ZUT4 128 aa0□□□□□ -2.41
TOP2A-202ENST00000577541 PYDC1Q8WXC3 89 aa0□□□□□ -2.41
TOP2A-202ENST00000577541 CDK5RAP2Q96SN8 1893 aa0□□□□□ -2.41
TOP2A-202ENST00000577541 DSCR8Q96T75 97 aa0□□□□□ -2.41
TOP2A-202ENST00000577541 MUC12Q9UKN1 5478 aa0□□□□□ -2.41
TOP2A-202ENST00000577541 PLXNA1Q9UIW2 1896 aa-0.01□□□□□ -2.41
TOP2A-202ENST00000577541 HMCN2Q8NDA2 5059 aa-0.01□□□□□ -2.41
TOP2A-202ENST00000577541 GOLGA3Q08378 1498 aa-0.01□□□□□ -2.41
TOP2A-202ENST00000577541 NPFFO15130 113 aa-0.01□□□□□ -2.41
TOP2A-202ENST00000577541 RBP4P02753 201 aa-0.01□□□□□ -2.41
TOP2A-202ENST00000577541 DBIP07108 87 aaKnown RBP-0.01□□□□□ -2.41
TOP2A-202ENST00000577541 RRAS2P62070 204 aaPredicted RBP-0.01□□□□□ -2.41
TOP2A-202ENST00000577541 SMIM21Q3B7S5 101 aa-0.01□□□□□ -2.41
TOP2A-202ENST00000577541 SPINK6Q6UWN8 80 aa-0.01□□□□□ -2.41
TOP2A-202ENST00000577541 CYP2G1PQ6ZSU1 146 aa-0.01□□□□□ -2.41
TOP2A-202ENST00000577541 TSTD1Q8NFU3 115 aa-0.01□□□□□ -2.41
TOP2A-202ENST00000577541 ANP32BQ92688 251 aaKnown RBP-0.01□□□□□ -2.41
TOP2A-202ENST00000577541 CELSR2Q9HCU4 2923 aa-0.01□□□□□ -2.41
TOP2A-202ENST00000577541 PHIPQ8WWQ0 1821 aa-0.01□□□□□ -2.41
TOP2A-202ENST00000577541 IBTKQ9P2D0 1353 aaPredicted RBP-0.02□□□□□ -2.41
TOP2A-202ENST00000577541 TRGV1A0A0A0MS02 117 aa-0.02□□□□□ -2.41
TOP2A-202ENST00000577541 G3V318 75 aa-0.02□□□□□ -2.41
TOP2A-202ENST00000577541 UBE2G1P62253 170 aa-0.02□□□□□ -2.41
TOP2A-202ENST00000577541 SPCS2Q15005 226 aa-0.02□□□□□ -2.41
TOP2A-202ENST00000577541 S100A7L2Q5SY68 101 aa-0.02□□□□□ -2.41
TOP2A-202ENST00000577541 SLC48A1Q6P1K1 146 aa-0.02□□□□□ -2.41
TOP2A-202ENST00000577541 VMO1Q7Z5L0 202 aa-0.02□□□□□ -2.41
TOP2A-202ENST00000577541 CTAGE3PQ8IX95 158 aa-0.02□□□□□ -2.41
TOP2A-202ENST00000577541 C4orf33Q8N1A6 199 aa-0.02□□□□□ -2.41
TOP2A-202ENST00000577541 VSTM2AQ8TAG5 236 aa-0.02□□□□□ -2.41
TOP2A-202ENST00000577541 MAFIPQ8WZ33 124 aa-0.02□□□□□ -2.41
TOP2A-202ENST00000577541 SDF2Q99470 211 aa-0.02□□□□□ -2.41
TOP2A-202ENST00000577541 BATF3Q9NR55 127 aa-0.02□□□□□ -2.41
TOP2A-202ENST00000577541 NRXN2Q9P2S2 1712 aa-0.02□□□□□ -2.41
TOP2A-202ENST00000577541 ZMYM4Q5VZL5 1548 aa-0.03□□□□□ -2.41
TOP2A-202ENST00000577541 DISP2A7MBM2 1401 aa-0.03□□□□□ -2.41
TOP2A-202ENST00000577541 TRAV12-2A0A075B6T6 113 aa-0.03□□□□□ -2.41
TOP2A-202ENST00000577541 TRAV2A0A0B4J234 112 aa-0.03□□□□□ -2.41
TOP2A-202ENST00000577541 NMBP08949 121 aa-0.03□□□□□ -2.41
TOP2A-202ENST00000577541 UBE2D1P51668 147 aa-0.03□□□□□ -2.41
TOP2A-202ENST00000577541 NCS1P62166 190 aa-0.03□□□□□ -2.41
TOP2A-202ENST00000577541 RPS25P62851 125 aaKnown RBP-0.03□□□□□ -2.41
TOP2A-202ENST00000577541 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.03□□□□□ -2.41
TOP2A-202ENST00000577541 COX7B2Q8TF08 81 aa-0.03□□□□□ -2.41
TOP2A-202ENST00000577541 BET1LQ9NYM9 111 aa-0.03□□□□□ -2.41
TOP2A-202ENST00000577541 COL7A1Q02388 2944 aa-0.03□□□□□ -2.41
TOP2A-202ENST00000577541 IGF2RP11717 2491 aa-0.03□□□□□ -2.41
TOP2A-202ENST00000577541 F8P00451 2351 aa-0.03□□□□□ -2.41
TOP2A-202ENST00000577541 AKAP11Q9UKA4 1901 aa-0.03□□□□□ -2.41
TOP2A-202ENST00000577541 MYH13Q9UKX3 1938 aa-0.03□□□□□ -2.41
TOP2A-202ENST00000577541 CDK13Q14004 1512 aaKnown RBP-0.03□□□□□ -2.41
TOP2A-202ENST00000577541 ARFGEF1Q9Y6D6 1849 aa-0.03□□□□□ -2.42
TOP2A-202ENST00000577541 K7ERU9 68 aa-0.04□□□□□ -2.42
TOP2A-202ENST00000577541 M0R2Z0 102 aa-0.04□□□□□ -2.42
TOP2A-202ENST00000577541 C9orf116Q5BN46 136 aaPredicted RBP-0.04□□□□□ -2.42
TOP2A-202ENST00000577541 LSM10Q969L4 123 aaKnown RBP-0.04□□□□□ -2.42
TOP2A-202ENST00000577541 MAGOHBQ96A72 148 aaKnown RBP-0.04□□□□□ -2.42
TOP2A-202ENST00000577541 BPESC1Q9GZL8 116 aa-0.04□□□□□ -2.42
TOP2A-202ENST00000577541 COA4Q9NYJ1 87 aa-0.04□□□□□ -2.42
TOP2A-202ENST00000577541 PHLPP1O60346 1717 aa-0.04□□□□□ -2.42
TOP2A-202ENST00000577541 MYOM3Q5VTT5 1437 aa-0.04□□□□□ -2.42
TOP2A-202ENST00000577541 KIAA0100Q14667 2235 aaKnown RBP-0.05□□□□□ -2.42
TOP2A-202ENST00000577541 TRBV7-1A0A0A6YYK4 115 aa-0.05□□□□□ -2.42
TOP2A-202ENST00000577541 F2Z2F3 143 aa-0.05□□□□□ -2.42
TOP2A-202ENST00000577541 APOC1P02654 83 aa-0.05□□□□□ -2.42
TOP2A-202ENST00000577541 COX4I1P13073 169 aa-0.05□□□□□ -2.42
TOP2A-202ENST00000577541 ACYP2P14621 99 aa-0.05□□□□□ -2.42
TOP2A-202ENST00000577541 EDDM3BP56851 147 aa-0.05□□□□□ -2.42
TOP2A-202ENST00000577541 FAM74A4Q5TZK3 123 aa-0.05□□□□□ -2.42
TOP2A-202ENST00000577541 SPANXN1Q5VSR9 72 aa-0.05□□□□□ -2.42
TOP2A-202ENST00000577541 Q6ZRX8 168 aa-0.05□□□□□ -2.42
TOP2A-202ENST00000577541 NDUFA11Q86Y39 141 aa-0.05□□□□□ -2.42
TOP2A-202ENST00000577541 MMGT1Q8N4V1 131 aa-0.05□□□□□ -2.42
TOP2A-202ENST00000577541 SPTSSBQ8NFR3 76 aa-0.05□□□□□ -2.42
TOP2A-202ENST00000577541 SMIM11BQ8TCY0 68 aa-0.05□□□□□ -2.42
TOP2A-202ENST00000577541 TMEM242Q9NWH2 141 aa-0.05□□□□□ -2.42
TOP2A-202ENST00000577541 COPZ2Q9P299 210 aa-0.05□□□□□ -2.42
TOP2A-202ENST00000577541 ERG28Q9UKR5 140 aa-0.05□□□□□ -2.42
TOP2A-202ENST00000577541 CASKIN1Q8WXD9 1431 aa-0.05□□□□□ -2.42
TOP2A-202ENST00000577541 NCOR2Q9Y618 2525 aa-0.06□□□□□ -2.42
TOP2A-202ENST00000577541 TMEM2Q9UHN6 1383 aa-0.06□□□□□ -2.42
TOP2A-202ENST00000577541 MYH6P13533 1939 aa-0.06□□□□□ -2.42
TOP2A-202ENST00000577541 UBR5O95071 2799 aaPredicted RBP-0.06□□□□□ -2.42
TOP2A-202ENST00000577541 RBAKDNA6NC62 111 aa-0.06□□□□□ -2.42
TOP2A-202ENST00000577541 CCDC179H3BU77 68 aa-0.06□□□□□ -2.42
TOP2A-202ENST00000577541 YPEL1O60688 119 aa-0.06□□□□□ -2.42
TOP2A-202ENST00000577541 NCR2O95944 276 aa-0.06□□□□□ -2.42
TOP2A-202ENST00000577541 SSBP1Q04837 148 aaKnown RBP-0.06□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms