RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 S100A12P80511 92 aa21.22■□□□□ 0.99
CTDNEP1-208ENST00000573600 WFDC9Q8NEX5 89 aa21.21■□□□□ 0.99
CTDNEP1-208ENST00000573600 SPATA3Q8NHX4 192 aa21.21■□□□□ 0.99
CTDNEP1-208ENST00000573600 SPXQ9BT56 116 aa21.21■□□□□ 0.99
CTDNEP1-208ENST00000573600 C20orf78Q9BR46 151 aa21.21■□□□□ 0.99
CTDNEP1-208ENST00000573600 HSPB8Q9UJY1 196 aa21.21■□□□□ 0.99
CTDNEP1-208ENST00000573600 M0R2P5 195 aa21.2■□□□□ 0.98
CTDNEP1-208ENST00000573600 RASL10AQ92737 203 aa21.2■□□□□ 0.98
CTDNEP1-208ENST00000573600 ZNF747Q9BV97 191 aa21.2■□□□□ 0.98
CTDNEP1-208ENST00000573600 A0A087WWL8 130 aa21.19■□□□□ 0.98
CTDNEP1-208ENST00000573600 RPL35AP18077 110 aaKnown RBP21.19■□□□□ 0.98
CTDNEP1-208ENST00000573600 BTF3P20290 206 aaKnown RBP21.19■□□□□ 0.98
CTDNEP1-208ENST00000573600 C11orf72Q8NBR9 251 aa21.19■□□□□ 0.98
CTDNEP1-208ENST00000573600 IGLV2-18A0A075B6J9 118 aa21.18■□□□□ 0.98
CTDNEP1-208ENST00000573600 GOLT1BQ9Y3E0 138 aa21.18■□□□□ 0.98
CTDNEP1-208ENST00000573600 CRYGDP07320 174 aa21.18■□□□□ 0.98
CTDNEP1-208ENST00000573600 GIG44P09565 113 aaPredicted RBP21.17■□□□□ 0.98
CTDNEP1-208ENST00000573600 HBDP02042 147 aa21.16■□□□□ 0.98
CTDNEP1-208ENST00000573600 PRM2P04554 102 aa21.16■□□□□ 0.98
CTDNEP1-208ENST00000573600 FAM74A4Q5TZK3 123 aa21.16■□□□□ 0.98
CTDNEP1-208ENST00000573600 TMEM70Q9BUB7 260 aa21.16■□□□□ 0.98
CTDNEP1-208ENST00000573600 IGHV3OR16-12A0A075B7B8 117 aa21.15■□□□□ 0.98
CTDNEP1-208ENST00000573600 F5H697 171 aa21.15■□□□□ 0.98
CTDNEP1-208ENST00000573600 SUMO2P61956 95 aaKnown RBP21.15■□□□□ 0.98
CTDNEP1-208ENST00000573600 SUMO4Q6EEV6 95 aa21.15■□□□□ 0.98
CTDNEP1-208ENST00000573600 A0A096LNJ9 63 aa21.15■□□□□ 0.98
CTDNEP1-208ENST00000573600 PCP4L1A6NKN8 68 aa21.15■□□□□ 0.98
CTDNEP1-208ENST00000573600 SMIM2Q9BVW6 85 aa21.15■□□□□ 0.98
CTDNEP1-208ENST00000573600 JMJD1CQ15652 2540 aa21.14■□□□□ 0.97
CTDNEP1-208ENST00000573600 A8MWV9 139 aa21.14■□□□□ 0.97
CTDNEP1-208ENST00000573600 Q8N976 141 aa21.14■□□□□ 0.97
CTDNEP1-208ENST00000573600 RPL39LQ96EH5 51 aaKnown RBP21.14■□□□□ 0.97
CTDNEP1-208ENST00000573600 NDUFAF3Q9BU61 184 aa21.14■□□□□ 0.97
CTDNEP1-208ENST00000573600 LURAP1LQ8IV03 231 aa21.13■□□□□ 0.97
CTDNEP1-208ENST00000573600 MAP1LC3CQ9BXW4 147 aa21.13■□□□□ 0.97
CTDNEP1-208ENST00000573600 TEP1Q99973 2627 aaKnown RBP21.13■□□□□ 0.97
CTDNEP1-208ENST00000573600 ZNF56Q15929 161 aa21.12■□□□□ 0.97
CTDNEP1-208ENST00000573600 WIPF1O43516 503 aa21.12■□□□□ 0.97
CTDNEP1-208ENST00000573600 AZU1P20160 251 aa21.12■□□□□ 0.97
CTDNEP1-208ENST00000573600 FCER1GP30273 86 aa21.12■□□□□ 0.97
CTDNEP1-208ENST00000573600 LINC00173Q6ZV60 143 aa21.12■□□□□ 0.97
CTDNEP1-208ENST00000573600 K7EMI3 77 aa21.11■□□□□ 0.97
CTDNEP1-208ENST00000573600 TEX43Q6ZNM6 134 aa21.11■□□□□ 0.97
CTDNEP1-208ENST00000573600 TMEM263Q8WUH6 116 aaKnown RBP21.11■□□□□ 0.97
CTDNEP1-208ENST00000573600 RPL32P62910 135 aaKnown RBP21.1■□□□□ 0.97
CTDNEP1-208ENST00000573600 LAGE3Q14657 143 aa21.1■□□□□ 0.97
CTDNEP1-208ENST00000573600 CSNK1G2-AS1Q8NCQ2 148 aa21.1■□□□□ 0.97
CTDNEP1-208ENST00000573600 RNASE8Q8TDE3 154 aaKnown RBP21.1■□□□□ 0.97
CTDNEP1-208ENST00000573600 SYS1-DBNDD2H3BUS1 97 aa21.09■□□□□ 0.97
CTDNEP1-208ENST00000573600 C3orf56Q8N813 242 aa21.09■□□□□ 0.97
CTDNEP1-208ENST00000573600 IL17DQ8TAD2 202 aa21.09■□□□□ 0.97
CTDNEP1-208ENST00000573600 ST20Q9HBF5 79 aa21.09■□□□□ 0.97
CTDNEP1-208ENST00000573600 IGLL1P15814 213 aa21.09■□□□□ 0.97
CTDNEP1-208ENST00000573600 CSTL1Q9H114 145 aa21.09■□□□□ 0.97
CTDNEP1-208ENST00000573600 NIPBLQ6KC79 2804 aaeCLIP21.09■□□□□ 0.97
CTDNEP1-208ENST00000573600 SHISA2Q6UWI4 295 aa21.08■□□□□ 0.97
CTDNEP1-208ENST00000573600 PRIMA1Q86XR5 153 aa21.08■□□□□ 0.97
CTDNEP1-208ENST00000573600 ATRQ13535 2644 aa21.08■□□□□ 0.96
CTDNEP1-208ENST00000573600 PET117Q6UWS5 81 aa21.07■□□□□ 0.96
CTDNEP1-208ENST00000573600 TMEM158Q8WZ71 300 aa21.07■□□□□ 0.96
CTDNEP1-208ENST00000573600 TRBV6-5A0A0K0K1A5 114 aa21.07■□□□□ 0.96
CTDNEP1-208ENST00000573600 M0QY20 66 aa21.07■□□□□ 0.96
CTDNEP1-208ENST00000573600 EDA2RQ9HAV5 297 aa21.07■□□□□ 0.96
CTDNEP1-208ENST00000573600 TENM1Q9UKZ4 2725 aa21.06■□□□□ 0.96
CTDNEP1-208ENST00000573600 C20orf202A1L168 122 aa21.06■□□□□ 0.96
CTDNEP1-208ENST00000573600 PKIAP61925 76 aa21.06■□□□□ 0.96
CTDNEP1-208ENST00000573600 ZNF705AQ6ZN79 300 aaPredicted RBP21.06■□□□□ 0.96
CTDNEP1-208ENST00000573600 C16orf74Q96GX8 76 aa21.06■□□□□ 0.96
CTDNEP1-208ENST00000573600 H7C1H1 209 aa21.05■□□□□ 0.96
CTDNEP1-208ENST00000573600 ORMDL2Q53FV1 153 aa21.05■□□□□ 0.96
CTDNEP1-208ENST00000573600 C12orf54Q6X4T0 127 aa21.05■□□□□ 0.96
CTDNEP1-208ENST00000573600 RHODO00212 210 aa21.04■□□□□ 0.96
CTDNEP1-208ENST00000573600 TCAPO15273 167 aa21.04■□□□□ 0.96
CTDNEP1-208ENST00000573600 UFSP1Q6NVU6 142 aa21.04■□□□□ 0.96
CTDNEP1-208ENST00000573600 ZNF664Q8N3J9 261 aa21.04■□□□□ 0.96
CTDNEP1-208ENST00000573600 MRPL16Q9NX20 251 aaKnown RBP21.04■□□□□ 0.96
CTDNEP1-208ENST00000573600 TSTD3H0UI37 97 aa21.04■□□□□ 0.96
CTDNEP1-208ENST00000573600 CFAP126Q5VTH2 177 aa21.04■□□□□ 0.96
CTDNEP1-208ENST00000573600 SPATA12Q7Z6I5 190 aa21.04■□□□□ 0.96
CTDNEP1-208ENST00000573600 RS1O15537 224 aa21.03■□□□□ 0.96
CTDNEP1-208ENST00000573600 POLR2KP53803 58 aaKnown RBP21.03■□□□□ 0.96
CTDNEP1-208ENST00000573600 VAMP8Q9BV40 100 aa21.02■□□□□ 0.96
CTDNEP1-208ENST00000573600 VCYO14598 125 aa21.01■□□□□ 0.95
CTDNEP1-208ENST00000573600 RRN3P1Q2M238 152 aa21.01■□□□□ 0.95
CTDNEP1-208ENST00000573600 LGALS9BQ3B8N2 356 aa21.01■□□□□ 0.95
CTDNEP1-208ENST00000573600 DAZ2Q13117 558 aaKnown RBP21.01■□□□□ 0.95
CTDNEP1-208ENST00000573600 IFI27L1Q96BM0 104 aa21.01■□□□□ 0.95
CTDNEP1-208ENST00000573600 SDHAF1A6NFY7 115 aa20.99■□□□□ 0.95
CTDNEP1-208ENST00000573600 NUDT3O95989 172 aa20.99■□□□□ 0.95
CTDNEP1-208ENST00000573600 ZFP2Q6ZN57 461 aa20.99■□□□□ 0.95
CTDNEP1-208ENST00000573600 TRGV1A0A0A0MS02 117 aa20.98■□□□□ 0.95
CTDNEP1-208ENST00000573600 PRO1933Q9H354 126 aa20.98■□□□□ 0.95
CTDNEP1-208ENST00000573600 IGHV3-73A0A0B4J1V6 119 aa20.97■□□□□ 0.95
CTDNEP1-208ENST00000573600 KIR2DL5BA0A0G2JN68 375 aa20.97■□□□□ 0.95
CTDNEP1-208ENST00000573600 KIR2DL5BA0A0G2JPC4 375 aa20.97■□□□□ 0.95
CTDNEP1-208ENST00000573600 TRBV27A0A0K0K1C4 114 aa20.97■□□□□ 0.95
CTDNEP1-208ENST00000573600 LINC01545Q5VT33 79 aa20.97■□□□□ 0.95
CTDNEP1-208ENST00000573600 KIR2DL5AQ8N109 375 aa20.97■□□□□ 0.95
CTDNEP1-208ENST00000573600 KIR2DL5BQ8NHK3 375 aa20.97■□□□□ 0.95
CTDNEP1-208ENST00000573600 KIR2DL4Q99706 377 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms