RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 DEFB124Q8NES8 71 aa12.64□□□□□ -0.39
LITAF-209ENST00000571688 MINOS1Q5TGZ0 78 aa12.63□□□□□ -0.39
LITAF-209ENST00000571688 SHISA2Q6UWI4 295 aa12.63□□□□□ -0.39
LITAF-209ENST00000571688 C15orf53Q8NAA6 179 aa12.63□□□□□ -0.39
LITAF-209ENST00000571688 FAM19A4Q96LR4 140 aa12.63□□□□□ -0.39
LITAF-209ENST00000571688 MINOS1-NBL1R4GNA1 71 aa12.63□□□□□ -0.39
LITAF-209ENST00000571688 TRBV7-1A0A0A6YYK4 115 aa12.63□□□□□ -0.39
LITAF-209ENST00000571688 TRAV2A0A0B4J234 112 aa12.63□□□□□ -0.39
LITAF-209ENST00000571688 TMEM223A0PJW6 202 aa12.63□□□□□ -0.39
LITAF-209ENST00000571688 VCYO14598 125 aa12.63□□□□□ -0.39
LITAF-209ENST00000571688 TCF15Q12870 199 aa12.63□□□□□ -0.39
LITAF-209ENST00000571688 OR10J6PQ8NGY7 276 aa12.63□□□□□ -0.39
LITAF-209ENST00000571688 DEFB104AQ8WTQ1 72 aa12.63□□□□□ -0.39
LITAF-209ENST00000571688 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.62□□□□□ -0.39
LITAF-209ENST00000571688 HERV-K104P63124 156 aa12.62□□□□□ -0.39
LITAF-209ENST00000571688 APRG1Q8IVJ8 170 aa12.62□□□□□ -0.39
LITAF-209ENST00000571688 OVOL1O14753 267 aa12.62□□□□□ -0.39
LITAF-209ENST00000571688 PRR30Q53SZ7 412 aaPredicted RBP12.62□□□□□ -0.39
LITAF-209ENST00000571688 SUMO4Q6EEV6 95 aa12.62□□□□□ -0.39
LITAF-209ENST00000571688 IGF2-ASQ6U949 168 aa12.62□□□□□ -0.39
LITAF-209ENST00000571688 FAM159AQ6UWV7 190 aa12.62□□□□□ -0.39
LITAF-209ENST00000571688 SMIM20Q8N5G0 67 aa12.62□□□□□ -0.39
LITAF-209ENST00000571688 SPANXA1Q9NS26 97 aa12.62□□□□□ -0.39
LITAF-209ENST00000571688 TRBV30A0A0K0K1B3 111 aa12.61□□□□□ -0.39
LITAF-209ENST00000571688 H3BMM0 161 aa12.61□□□□□ -0.39
LITAF-209ENST00000571688 UBE2WQ96B02 151 aa12.61□□□□□ -0.39
LITAF-209ENST00000571688 MGAQ8IWI9 3026 aa12.61□□□□□ -0.39
LITAF-209ENST00000571688 G3V318 75 aa12.61□□□□□ -0.39
LITAF-209ENST00000571688 IGHV4-39P01824 125 aa12.61□□□□□ -0.39
LITAF-209ENST00000571688 RNASE4P34096 147 aaKnown RBP12.61□□□□□ -0.39
LITAF-209ENST00000571688 Q1RN00 199 aa12.61□□□□□ -0.39
LITAF-209ENST00000571688 DMXL1Q9Y485 3027 aa12.61□□□□□ -0.39
LITAF-209ENST00000571688 LGALS9O00182 355 aa12.6□□□□□ -0.39
LITAF-209ENST00000571688 LY6HO94772 140 aa12.6□□□□□ -0.39
LITAF-209ENST00000571688 DEFB1P60022 68 aa12.6□□□□□ -0.39
LITAF-209ENST00000571688 APC2O95996 2303 aa12.6□□□□□ -0.39
LITAF-209ENST00000571688 DCHS2Q6V1P9 2916 aa12.6□□□□□ -0.39
LITAF-209ENST00000571688 SOCS3O14543 225 aa12.6□□□□□ -0.39
LITAF-209ENST00000571688 ABCA4P78363 2273 aa12.6□□□□□ -0.39
LITAF-209ENST00000571688 TRBV27A0A0K0K1C4 114 aa12.59□□□□□ -0.39
LITAF-209ENST00000571688 SDHAF1A6NFY7 115 aa12.59□□□□□ -0.39
LITAF-209ENST00000571688 M0R2P5 195 aa12.59□□□□□ -0.39
LITAF-209ENST00000571688 C1orf122Q6ZSJ8 110 aa12.59□□□□□ -0.39
LITAF-209ENST00000571688 A0A0J9YX75 114 aa12.59□□□□□ -0.39
LITAF-209ENST00000571688 TRIAP1O43715 76 aa12.59□□□□□ -0.39
LITAF-209ENST00000571688 IGHV1-69P01742 117 aa12.59□□□□□ -0.39
LITAF-209ENST00000571688 MRPL23Q16540 153 aaKnown RBP12.59□□□□□ -0.39
LITAF-209ENST00000571688 MDFICQ9P1T7 246 aa12.59□□□□□ -0.39
LITAF-209ENST00000571688 JPT2Q9H910 190 aa12.58□□□□□ -0.39
LITAF-209ENST00000571688 PIEZO2Q9H5I5 2752 aa12.58□□□□□ -0.39
LITAF-209ENST00000571688 TRBV6-5A0A0K0K1A5 114 aa12.58□□□□□ -0.4
LITAF-209ENST00000571688 ZNF22P17026 224 aaPredicted RBP12.58□□□□□ -0.4
LITAF-209ENST00000571688 BEX4Q9NWD9 120 aaPredicted RBP12.57□□□□□ -0.4
LITAF-209ENST00000571688 OPRPNQ99935 248 aaPredicted RBP12.56□□□□□ -0.4
LITAF-209ENST00000571688 A0A0J9YXY3 114 aa12.56□□□□□ -0.4
LITAF-209ENST00000571688 C2orf82Q6UX34 121 aa12.56□□□□□ -0.4
LITAF-209ENST00000571688 IGHV3-64A0A075B6Q5 118 aa12.55□□□□□ -0.4
LITAF-209ENST00000571688 H3BT86 120 aa12.55□□□□□ -0.4
LITAF-209ENST00000571688 MAP1BP46821 2468 aaKnown RBP12.55□□□□□ -0.4
LITAF-209ENST00000571688 A0A087WWL8 130 aa12.55□□□□□ -0.4
LITAF-209ENST00000571688 F6UB75 175 aa12.55□□□□□ -0.4
LITAF-209ENST00000571688 H7C423 109 aa12.55□□□□□ -0.4
LITAF-209ENST00000571688 NSUN5P1Q3KNT7 163 aa12.55□□□□□ -0.4
LITAF-209ENST00000571688 LINC01560Q8TB33 94 aa12.55□□□□□ -0.4
LITAF-209ENST00000571688 FAM240AA0A1B0GVK7 77 aa12.54□□□□□ -0.4
LITAF-209ENST00000571688 FOXC1Q12948 553 aa12.54□□□□□ -0.4
LITAF-209ENST00000571688 MEIG1Q5JSS6 88 aa12.54□□□□□ -0.4
LITAF-209ENST00000571688 LRBAP50851 2863 aa12.54□□□□□ -0.4
LITAF-209ENST00000571688 F5H697 171 aa12.54□□□□□ -0.4
LITAF-209ENST00000571688 RHOHQ15669 191 aa12.54□□□□□ -0.4
LITAF-209ENST00000571688 LITAFQ99732 161 aa12.54□□□□□ -0.4
LITAF-209ENST00000571688 ICOSQ9Y6W8 199 aa12.54□□□□□ -0.4
LITAF-209ENST00000571688 DEFB121Q5J5C9 76 aa12.53□□□□□ -0.4
LITAF-209ENST00000571688 UNQ9165/PRO28630Q6UXU0 137 aa12.53□□□□□ -0.4
LITAF-209ENST00000571688 ZNF580Q9UK33 172 aa12.53□□□□□ -0.4
LITAF-209ENST00000571688 ZNF256Q9Y2P7 627 aaPredicted RBP12.53□□□□□ -0.4
LITAF-209ENST00000571688 SIRPDQ9H106 197 aa12.52□□□□□ -0.4
LITAF-209ENST00000571688 Q8NA96 180 aa12.52□□□□□ -0.41
LITAF-209ENST00000571688 A0A0J9YXV3 536 aa12.51□□□□□ -0.41
LITAF-209ENST00000571688 KLLNB2CW77 178 aa12.51□□□□□ -0.41
LITAF-209ENST00000571688 UBE2E1P51965 193 aa12.51□□□□□ -0.41
LITAF-209ENST00000571688 TRBV7-7A0A0K0K1E9 115 aa12.51□□□□□ -0.41
LITAF-209ENST00000571688 ZFP36P26651 326 aaKnown RBP12.51□□□□□ -0.41
LITAF-209ENST00000571688 CACNA1BQ00975 2339 aa12.51□□□□□ -0.41
LITAF-209ENST00000571688 FAM223BA6NKX1 122 aa12.5□□□□□ -0.41
LITAF-209ENST00000571688 ZNF56Q15929 161 aa12.5□□□□□ -0.41
LITAF-209ENST00000571688 FAM223AQ8IWN6 122 aa12.5□□□□□ -0.41
LITAF-209ENST00000571688 IGHV3-30-3P0DP02 117 aa12.49□□□□□ -0.41
LITAF-209ENST00000571688 C20orf203Q8NBC4 194 aa12.49□□□□□ -0.41
LITAF-209ENST00000571688 ATMQ13315 3056 aa12.49□□□□□ -0.41
LITAF-209ENST00000571688 IGLV4-3A0A075B6K6 122 aa12.49□□□□□ -0.41
LITAF-209ENST00000571688 M0QY20 66 aa12.49□□□□□ -0.41
LITAF-209ENST00000571688 NDUFA4O00483 81 aa12.49□□□□□ -0.41
LITAF-209ENST00000571688 SPANXDQ9BXN6 97 aa12.49□□□□□ -0.41
LITAF-209ENST00000571688 SPANXCQ9NY87 97 aa12.49□□□□□ -0.41
LITAF-209ENST00000571688 TNFRSF18Q9Y5U5 241 aa12.49□□□□□ -0.41
LITAF-209ENST00000571688 C19orf54Q5BKX5 351 aa12.48□□□□□ -0.41
LITAF-209ENST00000571688 CHCHD5Q9BSY4 110 aa12.48□□□□□ -0.41
LITAF-209ENST00000571688 LST1O00453 97 aa12.48□□□□□ -0.41
LITAF-209ENST00000571688 TRBV12-3P01733 135 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms