RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 A0A0J9YY99 117 aa13.07□□□□□ -0.32
SCARF1-205ENST00000571272 H3BUX3 64 aa13.07□□□□□ -0.32
SCARF1-205ENST00000571272 POLR2KP53803 58 aaKnown RBP13.07□□□□□ -0.32
SCARF1-205ENST00000571272 TSPEAR-AS2P59090 65 aa13.07□□□□□ -0.32
SCARF1-205ENST00000571272 CFAP126Q5VTH2 177 aa13.07□□□□□ -0.32
SCARF1-205ENST00000571272 PTH2Q96A98 100 aa13.07□□□□□ -0.32
SCARF1-205ENST00000571272 SDHAF1A6NFY7 115 aa13.07□□□□□ -0.32
SCARF1-205ENST00000571272 KIR2DL4Q99706 377 aa13.07□□□□□ -0.32
SCARF1-205ENST00000571272 ZNF256Q9Y2P7 627 aaPredicted RBP13.07□□□□□ -0.32
SCARF1-205ENST00000571272 IGHV4OR15-8A0A075B7B6 117 aa13.06□□□□□ -0.32
SCARF1-205ENST00000571272 A0A087WW49 117 aa13.06□□□□□ -0.32
SCARF1-205ENST00000571272 HERVK_113P61574 105 aa13.06□□□□□ -0.32
SCARF1-205ENST00000571272 TGFAP01135 160 aa13.06□□□□□ -0.32
SCARF1-205ENST00000571272 IGKV3-20P01619 116 aa13.06□□□□□ -0.32
SCARF1-205ENST00000571272 FOXI1Q12951 378 aa13.06□□□□□ -0.32
SCARF1-205ENST00000571272 CLEC2AQ6UVW9 174 aa13.06□□□□□ -0.32
SCARF1-205ENST00000571272 USMG5Q96IX5 58 aa13.06□□□□□ -0.32
SCARF1-205ENST00000571272 NXPH4O95158 308 aa13.06□□□□□ -0.32
SCARF1-205ENST00000571272 IGHV4-39P01824 125 aa13.06□□□□□ -0.32
SCARF1-205ENST00000571272 NFE4Q86UQ8 179 aa13.06□□□□□ -0.32
SCARF1-205ENST00000571272 POM121L12Q8N7R1 296 aa13.06□□□□□ -0.32
SCARF1-205ENST00000571272 ZNRF2Q8NHG8 242 aa13.06□□□□□ -0.32
SCARF1-205ENST00000571272 CREBBPQ92793 2442 aa13.06□□□□□ -0.32
SCARF1-205ENST00000571272 C19orf84I3L1E1 186 aa13.05□□□□□ -0.32
SCARF1-205ENST00000571272 VCYO14598 125 aa13.05□□□□□ -0.32
SCARF1-205ENST00000571272 SCGB1A1P11684 91 aa13.05□□□□□ -0.32
SCARF1-205ENST00000571272 NDUFA11Q86Y39 141 aa13.05□□□□□ -0.32
SCARF1-205ENST00000571272 DAZ1Q9NQZ3 744 aaKnown RBP13.05□□□□□ -0.32
SCARF1-205ENST00000571272 KLLNB2CW77 178 aa13.05□□□□□ -0.32
SCARF1-205ENST00000571272 IGHG2P01859 326 aa13.05□□□□□ -0.32
SCARF1-205ENST00000571272 OPRPNQ99935 248 aaPredicted RBP13.05□□□□□ -0.32
SCARF1-205ENST00000571272 DOPEY2Q9Y3R5 2298 aa13.05□□□□□ -0.32
SCARF1-205ENST00000571272 CIDEAO60543 219 aa13.04□□□□□ -0.32
SCARF1-205ENST00000571272 SYT8Q8NBV8 401 aa13.04□□□□□ -0.32
SCARF1-205ENST00000571272 C1QTNF4Q9BXJ3 329 aa13.04□□□□□ -0.32
SCARF1-205ENST00000571272 IGHV4-61A0A0C4DH41 118 aa13.04□□□□□ -0.32
SCARF1-205ENST00000571272 TRAV12-2A0A075B6T6 113 aa13.03□□□□□ -0.32
SCARF1-205ENST00000571272 LY6DQ14210 128 aa13.03□□□□□ -0.32
SCARF1-205ENST00000571272 PAPPA-AS1Q5QFB9 102 aa13.03□□□□□ -0.32
SCARF1-205ENST00000571272 UBE2D3P61077 147 aa13.03□□□□□ -0.32
SCARF1-205ENST00000571272 UBE2D2P62837 147 aa13.03□□□□□ -0.32
SCARF1-205ENST00000571272 MDFICQ9P1T7 246 aa13.03□□□□□ -0.32
SCARF1-205ENST00000571272 TRBV7-9A0A0J9YWB2 115 aa13.02□□□□□ -0.33
SCARF1-205ENST00000571272 CFC1BP0CG36 223 aa13.02□□□□□ -0.33
SCARF1-205ENST00000571272 CFC1P0CG37 223 aa13.02□□□□□ -0.33
SCARF1-205ENST00000571272 UCNP55089 124 aa13.02□□□□□ -0.33
SCARF1-205ENST00000571272 TCL1BO95988 128 aa13.02□□□□□ -0.33
SCARF1-205ENST00000571272 IGHV3-30P01768 117 aa13.02□□□□□ -0.33
SCARF1-205ENST00000571272 ZNF688P0C7X2 276 aa13.02□□□□□ -0.33
SCARF1-205ENST00000571272 IGHV3-30-5P0DP03 117 aa13.02□□□□□ -0.33
SCARF1-205ENST00000571272 TMEM95Q3KNT9 176 aa13.02□□□□□ -0.33
SCARF1-205ENST00000571272 TMEM141Q96I45 108 aa13.02□□□□□ -0.33
SCARF1-205ENST00000571272 RPL32P62910 135 aaKnown RBP13.01□□□□□ -0.33
SCARF1-205ENST00000571272 ZNF56Q15929 161 aa13.01□□□□□ -0.33
SCARF1-205ENST00000571272 TIMM17AQ99595 171 aa13.01□□□□□ -0.33
SCARF1-205ENST00000571272 IGHV3-64A0A075B6Q5 118 aa13.01□□□□□ -0.33
SCARF1-205ENST00000571272 ZNF876PQ49A33 203 aa13.01□□□□□ -0.33
SCARF1-205ENST00000571272 DCANP1Q8TF63 244 aa13.01□□□□□ -0.33
SCARF1-205ENST00000571272 SLC25A29Q8N8R3 303 aa13□□□□□ -0.33
SCARF1-205ENST00000571272 CRYBG3Q68DQ2 2970 aa13□□□□□ -0.33
SCARF1-205ENST00000571272 J3QQQ9 107 aa13□□□□□ -0.33
SCARF1-205ENST00000571272 ID1P41134 155 aa13□□□□□ -0.33
SCARF1-205ENST00000571272 TRBV27A0A0K0K1C4 114 aa12.99□□□□□ -0.33
SCARF1-205ENST00000571272 A6NDX4 124 aa12.99□□□□□ -0.33
SCARF1-205ENST00000571272 H3BUA1 57 aa12.99□□□□□ -0.33
SCARF1-205ENST00000571272 SCGB1C2P0DMR2 95 aa12.99□□□□□ -0.33
SCARF1-205ENST00000571272 LGALS3P17931 250 aaKnown RBP12.99□□□□□ -0.33
SCARF1-205ENST00000571272 FHL3Q13643 280 aa12.99□□□□□ -0.33
SCARF1-205ENST00000571272 AMELXQ99217 191 aa12.99□□□□□ -0.33
SCARF1-205ENST00000571272 CDIP1Q9H305 208 aa12.99□□□□□ -0.33
SCARF1-205ENST00000571272 LGALS9O00182 355 aa12.98□□□□□ -0.33
SCARF1-205ENST00000571272 IGLV1-40P01703 118 aa12.98□□□□□ -0.33
SCARF1-205ENST00000571272 C10orf126Q8N4M7 172 aa12.98□□□□□ -0.33
SCARF1-205ENST00000571272 ATP6V0E2Q8NHE4 81 aa12.98□□□□□ -0.33
SCARF1-205ENST00000571272 RAX2Q96IS3 184 aa12.98□□□□□ -0.33
SCARF1-205ENST00000571272 CELSR2Q9HCU4 2923 aa12.98□□□□□ -0.33
SCARF1-205ENST00000571272 IGHV3-16A0A0C4DH30 117 aa12.97□□□□□ -0.33
SCARF1-205ENST00000571272 A0A1B0GV72 72 aa12.97□□□□□ -0.33
SCARF1-205ENST00000571272 Q8N1Y9 231 aa12.97□□□□□ -0.33
SCARF1-205ENST00000571272 CARD19Q96LW7 228 aa12.97□□□□□ -0.33
SCARF1-205ENST00000571272 M0QY20 66 aa12.97□□□□□ -0.33
SCARF1-205ENST00000571272 H7C2G1 150 aa12.96□□□□□ -0.33
SCARF1-205ENST00000571272 LYRM7Q5U5X0 104 aa12.96□□□□□ -0.33
SCARF1-205ENST00000571272 C10orf99Q6UWK7 81 aa12.96□□□□□ -0.33
SCARF1-205ENST00000571272 PRO1854Q9UHT4 67 aa12.96□□□□□ -0.33
SCARF1-205ENST00000571272 CKS1BP61024 79 aa12.95□□□□□ -0.34
SCARF1-205ENST00000571272 SPINK13Q1W4C9 94 aa12.95□□□□□ -0.34
SCARF1-205ENST00000571272 PIMREGQ9BSJ6 248 aa12.95□□□□□ -0.34
SCARF1-205ENST00000571272 TRBV6-5A0A0K0K1A5 114 aa12.95□□□□□ -0.34
SCARF1-205ENST00000571272 A4D1N5 150 aa12.95□□□□□ -0.34
SCARF1-205ENST00000571272 BRI3O95415 125 aa12.95□□□□□ -0.34
SCARF1-205ENST00000571272 MT-ATP8P03928 68 aa12.95□□□□□ -0.34
SCARF1-205ENST00000571272 P0DMU3 169 aa12.95□□□□□ -0.34
SCARF1-205ENST00000571272 FAM231AP0DMU4 169 aa12.95□□□□□ -0.34
SCARF1-205ENST00000571272 FAM231CP0DMU5 169 aa12.95□□□□□ -0.34
SCARF1-205ENST00000571272 TEN1Q86WV5 123 aa12.95□□□□□ -0.34
SCARF1-205ENST00000571272 C9orf85Q96MD7 179 aa12.95□□□□□ -0.34
SCARF1-205ENST00000571272 TRAV2A0A0B4J234 112 aa12.95□□□□□ -0.34
SCARF1-205ENST00000571272 ZNF580Q9UK33 172 aa12.94□□□□□ -0.34
SCARF1-205ENST00000571272 SPINK8P0C7L1 97 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms