RNA–Protein interactions for RNA: ENST00000567188.5

CNOT1-211, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best)

Gene CNOT1, Length 7,830 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-211ENST00000567188 TRGV1A0A0A0MS02 117 aa4.71□□□□□ -1.66
CNOT1-211ENST00000567188 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.71□□□□□ -1.66
CNOT1-211ENST00000567188 CFHR2P36980 270 aa4.71□□□□□ -1.66
CNOT1-211ENST00000567188 PRR20EP86478 221 aa4.71□□□□□ -1.66
CNOT1-211ENST00000567188 PRR20CP86479 221 aa4.71□□□□□ -1.66
CNOT1-211ENST00000567188 PRR20DP86480 221 aa4.71□□□□□ -1.66
CNOT1-211ENST00000567188 PRR20BP86481 221 aa4.71□□□□□ -1.66
CNOT1-211ENST00000567188 PRR20AP86496 221 aa4.71□□□□□ -1.66
CNOT1-211ENST00000567188 DAND5Q8N907 189 aa4.71□□□□□ -1.66
CNOT1-211ENST00000567188 SHANK2-AS3Q9BTD1 123 aa4.71□□□□□ -1.66
CNOT1-211ENST00000567188 IGHV3OR16-8A0A075B7F1 116 aa4.71□□□□□ -1.66
CNOT1-211ENST00000567188 GATA3P23771 443 aa4.71□□□□□ -1.66
CNOT1-211ENST00000567188 ERCC8Q13216 396 aa4.71□□□□□ -1.66
CNOT1-211ENST00000567188 DSCR8Q96T75 97 aa4.71□□□□□ -1.66
CNOT1-211ENST00000567188 DEFB113Q30KQ7 82 aa4.71□□□□□ -1.66
CNOT1-211ENST00000567188 GVINP1Q7Z2Y8 2422 aa4.71□□□□□ -1.66
CNOT1-211ENST00000567188 TRAV41A0A0B4J266 112 aa4.71□□□□□ -1.66
CNOT1-211ENST00000567188 IGKV1-12A0A0C4DH73 117 aa4.71□□□□□ -1.66
CNOT1-211ENST00000567188 IGKV1D-12P01611 117 aa4.71□□□□□ -1.66
CNOT1-211ENST00000567188 SIGLEC15Q6ZMC9 328 aa4.71□□□□□ -1.66
CNOT1-211ENST00000567188 Q6ZR03 302 aa4.71□□□□□ -1.66
CNOT1-211ENST00000567188 WIPF1O43516 503 aa4.71□□□□□ -1.66
CNOT1-211ENST00000567188 LINC00311Q8N616 119 aa4.71□□□□□ -1.66
CNOT1-211ENST00000567188 IGLV3-1P01715 115 aa4.7□□□□□ -1.66
CNOT1-211ENST00000567188 EFNA4P52798 201 aa4.7□□□□□ -1.66
CNOT1-211ENST00000567188 TP53TG1Q9Y2A0 90 aa4.7□□□□□ -1.66
CNOT1-211ENST00000567188 IGHV3-35A0A0C4DH35 117 aa4.7□□□□□ -1.66
CNOT1-211ENST00000567188 IGHV1-8P0DP01 117 aa4.7□□□□□ -1.66
CNOT1-211ENST00000567188 EGR2P11161 476 aaPredicted RBP4.7□□□□□ -1.66
CNOT1-211ENST00000567188 Q6JHZ5 121 aa4.7□□□□□ -1.66
CNOT1-211ENST00000567188 PRIMA1Q86XR5 153 aa4.7□□□□□ -1.66
CNOT1-211ENST00000567188 IGF2BP2-AS1Q96M15 143 aa4.7□□□□□ -1.66
CNOT1-211ENST00000567188 MED13Q9UHV7 2174 aa4.7□□□□□ -1.66
CNOT1-211ENST00000567188 IGKV2D-24A0A075B6R9 120 aa4.7□□□□□ -1.66
CNOT1-211ENST00000567188 C11orf86A6NJI1 115 aa4.7□□□□□ -1.66
CNOT1-211ENST00000567188 ODF3L1Q8IXM7 274 aa4.7□□□□□ -1.66
CNOT1-211ENST00000567188 TP73-AS1Q9UF72 201 aa4.7□□□□□ -1.66
CNOT1-211ENST00000567188 CACNA1BQ00975 2339 aa4.7□□□□□ -1.66
CNOT1-211ENST00000567188 TCL1BO95988 128 aa4.7□□□□□ -1.66
CNOT1-211ENST00000567188 DEFB130BP0DP73 79 aa4.7□□□□□ -1.66
CNOT1-211ENST00000567188 DEFB130AP0DP74 79 aa4.7□□□□□ -1.66
CNOT1-211ENST00000567188 COL6A6A6NMZ7 2263 aa4.7□□□□□ -1.66
CNOT1-211ENST00000567188 VCANP13611 3396 aa4.7□□□□□ -1.66
CNOT1-211ENST00000567188 ELANEP08246 267 aa4.7□□□□□ -1.66
CNOT1-211ENST00000567188 AGPAT4-IT1Q9H0P7 198 aa4.7□□□□□ -1.66
CNOT1-211ENST00000567188 CACNA1HO95180 2353 aa4.69□□□□□ -1.66
CNOT1-211ENST00000567188 IGHV3-49A0A0A0MS15 119 aa4.69□□□□□ -1.66
CNOT1-211ENST00000567188 C10orf142B7Z368 130 aa4.69□□□□□ -1.66
CNOT1-211ENST00000567188 HOXB4P17483 251 aaPredicted RBP4.69□□□□□ -1.66
CNOT1-211ENST00000567188 PLXNB1O43157 2135 aa4.69□□□□□ -1.66
CNOT1-211ENST00000567188 TIMM17BO60830 172 aa4.69□□□□□ -1.66
CNOT1-211ENST00000567188 PLA2G2EQ9NZK7 142 aa4.69□□□□□ -1.66
CNOT1-211ENST00000567188 LSM4Q9Y4Z0 139 aaKnown RBP4.69□□□□□ -1.66
CNOT1-211ENST00000567188 IGKV1D-17A0A075B6S4 117 aa4.69□□□□□ -1.66
CNOT1-211ENST00000567188 TRBV30A0A0K0K1B3 111 aa4.69□□□□□ -1.66
CNOT1-211ENST00000567188 SDHAF1A6NFY7 115 aa4.69□□□□□ -1.66
CNOT1-211ENST00000567188 IGHV3-11P01762 117 aa4.69□□□□□ -1.66
CNOT1-211ENST00000567188 FUSP35637 526 aaKnown RBP eCLIP4.69□□□□□ -1.66
CNOT1-211ENST00000567188 PMAIP1Q13794 54 aa4.69□□□□□ -1.66
CNOT1-211ENST00000567188 CLEC19AQ6UXS0 136 aa4.69□□□□□ -1.66
CNOT1-211ENST00000567188 COL6A3P12111 3177 aa4.69□□□□□ -1.66
CNOT1-211ENST00000567188 DIAPH2-AS1Q14236 149 aa4.69□□□□□ -1.66
CNOT1-211ENST00000567188 PRYO14603 147 aa4.68□□□□□ -1.66
CNOT1-211ENST00000567188 Q6ZSR3 168 aa4.68□□□□□ -1.66
CNOT1-211ENST00000567188 SPENQ96T58 3664 aaKnown RBP4.68□□□□□ -1.66
CNOT1-211ENST00000567188 A0A0J9YXY3 114 aa4.68□□□□□ -1.66
CNOT1-211ENST00000567188 I3L3M4 83 aa4.68□□□□□ -1.66
CNOT1-211ENST00000567188 NXPH4O95158 308 aa4.68□□□□□ -1.66
CNOT1-211ENST00000567188 C9orf66Q5T8R8 295 aa4.68□□□□□ -1.66
CNOT1-211ENST00000567188 PROP1O75360 226 aa4.68□□□□□ -1.66
CNOT1-211ENST00000567188 IGHV1-3A0A0C4DH29 117 aa4.68□□□□□ -1.66
CNOT1-211ENST00000567188 A0A0G2JRQ6 117 aa4.68□□□□□ -1.66
CNOT1-211ENST00000567188 BUB1B-PAK6H3BSN5 160 aa4.68□□□□□ -1.66
CNOT1-211ENST00000567188 Q6ZRM9 215 aa4.68□□□□□ -1.66
CNOT1-211ENST00000567188 WFDC9Q8NEX5 89 aa4.68□□□□□ -1.66
CNOT1-211ENST00000567188 C1orf147Q96MC9 270 aaPredicted RBP4.68□□□□□ -1.66
CNOT1-211ENST00000567188 TECTAO75443 2155 aa4.68□□□□□ -1.66
CNOT1-211ENST00000567188 SPEGQ15772 3267 aa4.68□□□□□ -1.66
CNOT1-211ENST00000567188 TRBV12-3P01733 135 aa4.68□□□□□ -1.66
CNOT1-211ENST00000567188 KRTAP10-9P60411 292 aa4.68□□□□□ -1.66
CNOT1-211ENST00000567188 ZNF833PQ6ZTB9 187 aa4.68□□□□□ -1.66
CNOT1-211ENST00000567188 RIF1Q5UIP0 2472 aaKnown RBP4.68□□□□□ -1.66
CNOT1-211ENST00000567188 USP17L23D6RBM5 183 aa4.68□□□□□ -1.66
CNOT1-211ENST00000567188 LENEPQ9Y5L5 61 aa4.68□□□□□ -1.66
CNOT1-211ENST00000567188 EIF4EBP1Q13541 118 aaPredicted RBP4.67□□□□□ -1.66
CNOT1-211ENST00000567188 C20orf197Q8N268 126 aa4.67□□□□□ -1.66
CNOT1-211ENST00000567188 RNF152Q8N8N0 203 aa4.67□□□□□ -1.66
CNOT1-211ENST00000567188 FGF23Q9GZV9 251 aaPredicted RBP4.67□□□□□ -1.66
CNOT1-211ENST00000567188 EP300Q09472 2414 aaPredicted RBP4.67□□□□□ -1.66
CNOT1-211ENST00000567188 IGHV3OR16-13A0A075B7E8 117 aa4.67□□□□□ -1.66
CNOT1-211ENST00000567188 IGHV3-74A0A0B4J1X5 117 aa4.67□□□□□ -1.66
CNOT1-211ENST00000567188 A0A1B0GXF2 115 aa4.67□□□□□ -1.66
CNOT1-211ENST00000567188 B9D2Q9BPU9 175 aa4.67□□□□□ -1.66
CNOT1-211ENST00000567188 TRAV4A0A0B4J268 109 aa4.67□□□□□ -1.66
CNOT1-211ENST00000567188 LRCOL1A6NCL2 159 aa4.67□□□□□ -1.66
CNOT1-211ENST00000567188 IGHV4-38-2P0DP08 117 aa4.67□□□□□ -1.66
CNOT1-211ENST00000567188 FXYD7P58549 80 aa4.67□□□□□ -1.66
CNOT1-211ENST00000567188 PRUNE2Q8WUY3 3088 aa4.67□□□□□ -1.66
CNOT1-211ENST00000567188 NDUFA4L2Q9NRX3 87 aa4.67□□□□□ -1.66
CNOT1-211ENST00000567188 MDFICQ9P1T7 246 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms