RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 E7EQL1 145 aa6.91□□□□□ -1.3
CDH1-205ENST00000562836 GAS8-AS1O95177 125 aa6.91□□□□□ -1.3
CDH1-205ENST00000562836 IGLV2-14P01704 120 aa6.91□□□□□ -1.3
CDH1-205ENST00000562836 IGLV3-21P80748 117 aaPredicted RBP6.91□□□□□ -1.3
CDH1-205ENST00000562836 CLEC19AQ6UXS0 136 aa6.91□□□□□ -1.3
CDH1-205ENST00000562836 GPHB5Q86YW7 130 aa6.91□□□□□ -1.3
CDH1-205ENST00000562836 TRBV12-3P01733 135 aa6.9□□□□□ -1.3
CDH1-205ENST00000562836 IGHV4-34P06331 123 aa6.9□□□□□ -1.3
CDH1-205ENST00000562836 LINC00271P0C7V0 271 aa6.9□□□□□ -1.3
CDH1-205ENST00000562836 Q6ZRP5 223 aa6.9□□□□□ -1.3
CDH1-205ENST00000562836 LINC00337Q8N6G1 96 aa6.9□□□□□ -1.3
CDH1-205ENST00000562836 TRAV3A0A0B4J244 114 aa6.9□□□□□ -1.31
CDH1-205ENST00000562836 I3L3M4 83 aa6.9□□□□□ -1.31
CDH1-205ENST00000562836 M0R1W7 72 aa6.9□□□□□ -1.31
CDH1-205ENST00000562836 RFPL3SP0C7P2 107 aa6.9□□□□□ -1.31
CDH1-205ENST00000562836 C7orf65Q6ZTY9 151 aa6.9□□□□□ -1.31
CDH1-205ENST00000562836 NKAPP1Q8N9T2 125 aa6.9□□□□□ -1.31
CDH1-205ENST00000562836 IGLV3-32A0A0A0MS00 114 aa6.89□□□□□ -1.31
CDH1-205ENST00000562836 M0R3E3 92 aa6.89□□□□□ -1.31
CDH1-205ENST00000562836 DNAL4O96015 105 aa6.89□□□□□ -1.31
CDH1-205ENST00000562836 IGKV1-16P04430 117 aa6.89□□□□□ -1.31
CDH1-205ENST00000562836 CD59P13987 128 aa6.89□□□□□ -1.31
CDH1-205ENST00000562836 SYCNQ0VAF6 134 aa6.89□□□□□ -1.31
CDH1-205ENST00000562836 NNATQ16517 81 aa6.89□□□□□ -1.31
CDH1-205ENST00000562836 C15orf32Q32M92 178 aa6.89□□□□□ -1.31
CDH1-205ENST00000562836 REV3LO60673 3130 aa6.89□□□□□ -1.31
CDH1-205ENST00000562836 USP34Q70CQ2 3546 aa6.89□□□□□ -1.31
CDH1-205ENST00000562836 PCNX2A6NKB5 2137 aa6.89□□□□□ -1.31
CDH1-205ENST00000562836 IGKV1-12A0A0C4DH73 117 aa6.89□□□□□ -1.31
CDH1-205ENST00000562836 LINC01546A6NGU7 62 aa6.89□□□□□ -1.31
CDH1-205ENST00000562836 NDUFC1O43677 76 aa6.89□□□□□ -1.31
CDH1-205ENST00000562836 IGKV1D-12P01611 117 aa6.89□□□□□ -1.31
CDH1-205ENST00000562836 CCL5P13501 91 aa6.88□□□□□ -1.31
CDH1-205ENST00000562836 Q1T7F1 81 aa6.88□□□□□ -1.31
CDH1-205ENST00000562836 Q6ZSV7 163 aa6.88□□□□□ -1.31
CDH1-205ENST00000562836 DIRC1Q969H9 104 aa6.88□□□□□ -1.31
CDH1-205ENST00000562836 PRR25Q96S07 402 aa6.88□□□□□ -1.31
CDH1-205ENST00000562836 IGKV1-27A0A075B6S5 117 aa6.88□□□□□ -1.31
CDH1-205ENST00000562836 MIFP14174 115 aa6.88□□□□□ -1.31
CDH1-205ENST00000562836 SVILO95425 2214 aa6.88□□□□□ -1.31
CDH1-205ENST00000562836 TRAV12-1A0A0B4J245 112 aa6.87□□□□□ -1.31
CDH1-205ENST00000562836 LYZL1Q6UWQ5 148 aa6.87□□□□□ -1.31
CDH1-205ENST00000562836 LINC00269Q8N2A0 174 aa6.87□□□□□ -1.31
CDH1-205ENST00000562836 ZNF706Q9Y5V0 76 aaPredicted RBP6.87□□□□□ -1.31
CDH1-205ENST00000562836 A6NN06 94 aa6.87□□□□□ -1.31
CDH1-205ENST00000562836 NTN3O00634 580 aaPredicted RBP6.87□□□□□ -1.31
CDH1-205ENST00000562836 P0C879 139 aa6.87□□□□□ -1.31
CDH1-205ENST00000562836 NDPQ00604 133 aa6.87□□□□□ -1.31
CDH1-205ENST00000562836 ZNF491Q8N8L2 437 aa6.87□□□□□ -1.31
CDH1-205ENST00000562836 FAM167A-AS1Q96KT0 104 aa6.87□□□□□ -1.31
CDH1-205ENST00000562836 PHLDA3Q9Y5J5 127 aa6.87□□□□□ -1.31
CDH1-205ENST00000562836 C12orf77C9JDV5 145 aa6.86□□□□□ -1.31
CDH1-205ENST00000562836 TSPEAR-AS2P59090 65 aa6.86□□□□□ -1.31
CDH1-205ENST00000562836 CCL4L1Q8NHW4 92 aa6.86□□□□□ -1.31
CDH1-205ENST00000562836 TOMM6Q96B49 74 aa6.86□□□□□ -1.31
CDH1-205ENST00000562836 CCL13Q99616 98 aa6.86□□□□□ -1.31
CDH1-205ENST00000562836 KLK15Q9H2R5 256 aa6.86□□□□□ -1.31
CDH1-205ENST00000562836 CLPSP04118 112 aa6.86□□□□□ -1.31
CDH1-205ENST00000562836 MP68P56378 58 aa6.86□□□□□ -1.31
CDH1-205ENST00000562836 SPTBN5Q9NRC6 3674 aaKnown RBP6.86□□□□□ -1.31
CDH1-205ENST00000562836 C16orf90A8MZG2 172 aa6.86□□□□□ -1.31
CDH1-205ENST00000562836 RTTNQ86VV8 2226 aa6.85□□□□□ -1.31
CDH1-205ENST00000562836 CHD9Q3L8U1 2897 aa6.85□□□□□ -1.31
CDH1-205ENST00000562836 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.85□□□□□ -1.31
CDH1-205ENST00000562836 TRAV22A0A0B4J277 110 aa6.85□□□□□ -1.31
CDH1-205ENST00000562836 FSTL3O95633 263 aa6.85□□□□□ -1.31
CDH1-205ENST00000562836 RNASE4P34096 147 aaKnown RBP6.85□□□□□ -1.31
CDH1-205ENST00000562836 ENHOQ6UWT2 76 aa6.85□□□□□ -1.31
CDH1-205ENST00000562836 DNAH14Q0VDD8 3507 aa6.84□□□□□ -1.31
CDH1-205ENST00000562836 IGLV3-19P01714 112 aa6.84□□□□□ -1.31
CDH1-205ENST00000562836 LINC01554Q52M75 96 aa6.84□□□□□ -1.31
CDH1-205ENST00000562836 ZNF843Q8N446 348 aa6.84□□□□□ -1.31
CDH1-205ENST00000562836 Q8N6K4 173 aa6.84□□□□□ -1.31
CDH1-205ENST00000562836 IMMP1LQ96LU5 166 aa6.84□□□□□ -1.31
CDH1-205ENST00000562836 FDCSPQ8NFU4 85 aa6.84□□□□□ -1.31
CDH1-205ENST00000562836 C22orf24Q9Y442 160 aa6.84□□□□□ -1.31
CDH1-205ENST00000562836 CACNA1IQ9P0X4 2223 aa6.83□□□□□ -1.32
CDH1-205ENST00000562836 LHBP01229 141 aa6.83□□□□□ -1.32
CDH1-205ENST00000562836 SCGB3A1Q96QR1 104 aa6.83□□□□□ -1.32
CDH1-205ENST00000562836 PLCE1Q9P212 2302 aa6.83□□□□□ -1.32
CDH1-205ENST00000562836 PRRC2AP48634 2157 aaKnown RBP6.83□□□□□ -1.32
CDH1-205ENST00000562836 MED14OSP0DP75 135 aa6.83□□□□□ -1.32
CDH1-205ENST00000562836 DAZAP2Q15038 168 aaPredicted RBP6.83□□□□□ -1.32
CDH1-205ENST00000562836 DEFB110Q30KQ9 67 aa6.83□□□□□ -1.32
CDH1-205ENST00000562836 VMO1Q7Z5L0 202 aa6.83□□□□□ -1.32
CDH1-205ENST00000562836 CADP27708 2225 aa6.82□□□□□ -1.32
CDH1-205ENST00000562836 PRUNE2Q8WUY3 3088 aa6.82□□□□□ -1.32
CDH1-205ENST00000562836 C17orf98A8MV24 154 aa6.82□□□□□ -1.32
CDH1-205ENST00000562836 UBE2AP49459 152 aa6.82□□□□□ -1.32
CDH1-205ENST00000562836 C14orf132Q9NPU4 83 aa6.82□□□□□ -1.32
CDH1-205ENST00000562836 X6R8D5 127 aa6.82□□□□□ -1.32
CDH1-205ENST00000562836 LRP4O75096 1905 aa6.82□□□□□ -1.32
CDH1-205ENST00000562836 TRBV6-6A0A0A6YYG2 114 aa6.82□□□□□ -1.32
CDH1-205ENST00000562836 REG3AQ06141 175 aa6.82□□□□□ -1.32
CDH1-205ENST00000562836 PATE1Q8WXA2 126 aa6.82□□□□□ -1.32
CDH1-205ENST00000562836 ATP11AUNQ6ZP68 121 aa6.81□□□□□ -1.32
CDH1-205ENST00000562836 ZNF826PQ6ZT77 177 aa6.81□□□□□ -1.32
CDH1-205ENST00000562836 KLF14Q8TD94 323 aaPredicted RBP6.81□□□□□ -1.32
CDH1-205ENST00000562836 HS3ST6Q96QI5 342 aa6.81□□□□□ -1.32
CDH1-205ENST00000562836 NDUFA12Q9UI09 145 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms