RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 Q6ZNX1 250 aa11.87□□□□□ -0.51
SMAD3-210ENST00000559092 SLC51BQ86UW2 128 aa11.87□□□□□ -0.51
SMAD3-210ENST00000559092 C11orf52Q96A22 123 aa11.87□□□□□ -0.51
SMAD3-210ENST00000559092 KRTAP17-1Q9BYP8 105 aa11.87□□□□□ -0.51
SMAD3-210ENST00000559092 DNAH5Q8TE73 4624 aa11.87□□□□□ -0.51
SMAD3-210ENST00000559092 HSPG2P98160 4391 aa11.87□□□□□ -0.51
SMAD3-210ENST00000559092 A0A087WTM6 91 aa11.86□□□□□ -0.51
SMAD3-210ENST00000559092 A0A087WWC5 75 aa11.86□□□□□ -0.51
SMAD3-210ENST00000559092 GAGE12JA6NER3 117 aa11.86□□□□□ -0.51
SMAD3-210ENST00000559092 M0R381 172 aa11.86□□□□□ -0.51
SMAD3-210ENST00000559092 RPL35P42766 123 aaKnown RBP11.86□□□□□ -0.51
SMAD3-210ENST00000559092 GAGE1Q13065 139 aa11.86□□□□□ -0.51
SMAD3-210ENST00000559092 GAGE4Q13068 117 aa11.86□□□□□ -0.51
SMAD3-210ENST00000559092 GAGE5Q13069 117 aa11.86□□□□□ -0.51
SMAD3-210ENST00000559092 GAGE13Q4V321 117 aa11.86□□□□□ -0.51
SMAD3-210ENST00000559092 C14orf178Q8N769 122 aaPredicted RBP11.86□□□□□ -0.51
SMAD3-210ENST00000559092 FAM74A4Q5TZK3 123 aa11.85□□□□□ -0.51
SMAD3-210ENST00000559092 SSBP4Q9BWG4 385 aaPredicted RBP11.85□□□□□ -0.51
SMAD3-210ENST00000559092 A0A087WWL8 130 aa11.84□□□□□ -0.51
SMAD3-210ENST00000559092 TRBV10-1A0A0K0K1A3 114 aa11.84□□□□□ -0.51
SMAD3-210ENST00000559092 Q9UF83 564 aa11.84□□□□□ -0.51
SMAD3-210ENST00000559092 PDE6DO43924 150 aa11.83□□□□□ -0.52
SMAD3-210ENST00000559092 LAGE3Q14657 143 aa11.83□□□□□ -0.52
SMAD3-210ENST00000559092 SNAI2O43623 268 aa11.82□□□□□ -0.52
SMAD3-210ENST00000559092 IFNA1P01562 189 aa11.82□□□□□ -0.52
SMAD3-210ENST00000559092 OR5AL1P0C617 328 aa11.82□□□□□ -0.52
SMAD3-210ENST00000559092 RPL19P84098 196 aaKnown RBP11.82□□□□□ -0.52
SMAD3-210ENST00000559092 SMIM12Q96EX1 92 aa11.82□□□□□ -0.52
SMAD3-210ENST00000559092 PSCAO43653 123 aa11.81□□□□□ -0.52
SMAD3-210ENST00000559092 IGHV3-30P01768 117 aa11.81□□□□□ -0.52
SMAD3-210ENST00000559092 IGHV3-33P01772 117 aa11.81□□□□□ -0.52
SMAD3-210ENST00000559092 IGHV3-30-3P0DP02 117 aa11.81□□□□□ -0.52
SMAD3-210ENST00000559092 IGHV3-30-5P0DP03 117 aa11.81□□□□□ -0.52
SMAD3-210ENST00000559092 TAGLN2P37802 199 aaKnown RBP11.81□□□□□ -0.52
SMAD3-210ENST00000559092 RAB4BP61018 213 aa11.81□□□□□ -0.52
SMAD3-210ENST00000559092 MEF2BQ02080 365 aaPredicted RBP11.81□□□□□ -0.52
SMAD3-210ENST00000559092 PRR27Q6MZM9 219 aa11.81□□□□□ -0.52
SMAD3-210ENST00000559092 OR10AG1Q8NH19 301 aa11.81□□□□□ -0.52
SMAD3-210ENST00000559092 DERL1Q9BUN8 251 aa11.81□□□□□ -0.52
SMAD3-210ENST00000559092 RPL36AP83881 106 aaKnown RBP11.8□□□□□ -0.52
SMAD3-210ENST00000559092 CENPWQ5EE01 88 aa11.8□□□□□ -0.52
SMAD3-210ENST00000559092 AKAP14Q86UN6 197 aa11.8□□□□□ -0.52
SMAD3-210ENST00000559092 RPL36ALQ969Q0 106 aaKnown RBP11.8□□□□□ -0.52
SMAD3-210ENST00000559092 APOBP04114 4563 aaKnown RBP11.79□□□□□ -0.52
SMAD3-210ENST00000559092 TRBV7-3A0A075B6L6 115 aa11.79□□□□□ -0.52
SMAD3-210ENST00000559092 TRAV8-3A0A0A6YYJ7 113 aa11.79□□□□□ -0.52
SMAD3-210ENST00000559092 SPANXN1Q5VSR9 72 aa11.79□□□□□ -0.52
SMAD3-210ENST00000559092 OR10G8Q8NGN5 311 aa11.79□□□□□ -0.52
SMAD3-210ENST00000559092 DAZAP1Q96EP5 407 aaKnown RBP11.79□□□□□ -0.52
SMAD3-210ENST00000559092 TM2D2Q9BX73 214 aa11.79□□□□□ -0.52
SMAD3-210ENST00000559092 LRCOL1A6NCL2 159 aa11.78□□□□□ -0.52
SMAD3-210ENST00000559092 IGLV2-8P01709 118 aa11.78□□□□□ -0.52
SMAD3-210ENST00000559092 BCL2P10415 239 aa11.78□□□□□ -0.52
SMAD3-210ENST00000559092 GNG4P50150 75 aa11.78□□□□□ -0.52
SMAD3-210ENST00000559092 RPS20P60866 119 aaKnown RBP11.78□□□□□ -0.52
SMAD3-210ENST00000559092 UBE2D3P61077 147 aa11.78□□□□□ -0.52
SMAD3-210ENST00000559092 UBE2D2P62837 147 aa11.78□□□□□ -0.52
SMAD3-210ENST00000559092 TOR2AQ5JU69 321 aa11.78□□□□□ -0.52
SMAD3-210ENST00000559092 MAPKAPK5-AS1Q8N8E1 139 aa11.78□□□□□ -0.52
SMAD3-210ENST00000559092 BIN3Q9NQY0 253 aa11.78□□□□□ -0.52
SMAD3-210ENST00000559092 VAX2Q9UIW0 290 aa11.78□□□□□ -0.52
SMAD3-210ENST00000559092 Q9HAA7 133 aa11.77□□□□□ -0.53
SMAD3-210ENST00000559092 MED9Q9NWA0 146 aa11.77□□□□□ -0.53
SMAD3-210ENST00000559092 RAB19A4D1S5 217 aa11.76□□□□□ -0.53
SMAD3-210ENST00000559092 C19orf71A6NCJ1 209 aa11.76□□□□□ -0.53
SMAD3-210ENST00000559092 C9orf62Q8N4C0 152 aa11.76□□□□□ -0.53
SMAD3-210ENST00000559092 NTN5Q8WTR8 489 aaPredicted RBP11.76□□□□□ -0.53
SMAD3-210ENST00000559092 CHCHD7Q9BUK0 85 aa11.76□□□□□ -0.53
SMAD3-210ENST00000559092 URGCP-MRPS24S4R325 110 aa11.76□□□□□ -0.53
SMAD3-210ENST00000559092 ABCA13Q86UQ4 5058 aa11.76□□□□□ -0.53
SMAD3-210ENST00000559092 XKRY2A2RUG3 117 aa11.75□□□□□ -0.53
SMAD3-210ENST00000559092 ZNF56Q15929 161 aa11.75□□□□□ -0.53
SMAD3-210ENST00000559092 NIT1Q86X76 327 aa11.75□□□□□ -0.53
SMAD3-210ENST00000559092 Q8N1X5 172 aa11.75□□□□□ -0.53
SMAD3-210ENST00000559092 OR2D3Q8NGH3 330 aa11.75□□□□□ -0.53
SMAD3-210ENST00000559092 KRTAP4-5Q9BYR2 181 aa11.75□□□□□ -0.53
SMAD3-210ENST00000559092 MUC21A0A0G2JKD1 596 aa11.74□□□□□ -0.53
SMAD3-210ENST00000559092 MUC21A0A140T8X8 626 aa11.74□□□□□ -0.53
SMAD3-210ENST00000559092 IGLC6P0CF74 106 aa11.74□□□□□ -0.53
SMAD3-210ENST00000559092 SMIM17P0DL12 118 aa11.74□□□□□ -0.53
SMAD3-210ENST00000559092 FUSP35637 526 aaKnown RBP eCLIP11.74□□□□□ -0.534e-6■■□□□ 13.9
SMAD3-210ENST00000559092 DAZ4Q86SG3 579 aaKnown RBP11.74□□□□□ -0.53
SMAD3-210ENST00000559092 Q8N3U1 123 aa11.74□□□□□ -0.53
SMAD3-210ENST00000559092 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.74□□□□□ -0.53
SMAD3-210ENST00000559092 AP1S3Q96PC3 154 aa11.74□□□□□ -0.53
SMAD3-210ENST00000559092 DAZ3Q9NR90 486 aaKnown RBP11.74□□□□□ -0.53
SMAD3-210ENST00000559092 COX11Q9Y6N1 276 aa11.74□□□□□ -0.53
SMAD3-210ENST00000559092 KIF25-AS1Q9Y6Z4 181 aa11.74□□□□□ -0.53
SMAD3-210ENST00000559092 F2Z2F3 143 aa11.73□□□□□ -0.53
SMAD3-210ENST00000559092 F5H697 171 aa11.73□□□□□ -0.53
SMAD3-210ENST00000559092 P01737 135 aa11.73□□□□□ -0.53
SMAD3-210ENST00000559092 ELOBQ15370 118 aa11.73□□□□□ -0.53
SMAD3-210ENST00000559092 FER1L6-AS1Q8NA97 138 aa11.73□□□□□ -0.53
SMAD3-210ENST00000559092 NEXN-AS1Q8NBZ9 246 aa11.73□□□□□ -0.53
SMAD3-210ENST00000559092 TRBV20OR9-2A0A075B6H5 130 aa11.72□□□□□ -0.53
SMAD3-210ENST00000559092 A0A087WX48 190 aa11.72□□□□□ -0.53
SMAD3-210ENST00000559092 GCSHP23434 173 aa11.72□□□□□ -0.53
SMAD3-210ENST00000559092 SSTP61278 116 aa11.72□□□□□ -0.53
SMAD3-210ENST00000559092 CACNG7P62955 275 aa11.72□□□□□ -0.53
SMAD3-210ENST00000559092 BLOC1S1P78537 153 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms