RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 C1orf195Q5TG92 126 aa7□□□□□ -1.29
SYNE3-205ENST00000557275 IGKV1-16P04430 117 aa7□□□□□ -1.29
SYNE3-205ENST00000557275 MED14OSP0DP75 135 aa7□□□□□ -1.29
SYNE3-205ENST00000557275 CD177Q8N6Q3 437 aa7□□□□□ -1.29
SYNE3-205ENST00000557275 GFI1Q99684 422 aa7□□□□□ -1.29
SYNE3-205ENST00000557275 TRAV26-1A0A087WT03 109 aa7□□□□□ -1.29
SYNE3-205ENST00000557275 NDUFA7O95182 113 aa7□□□□□ -1.29
SYNE3-205ENST00000557275 BLCAPP62952 87 aa7□□□□□ -1.29
SYNE3-205ENST00000557275 GAFA1Q96PS6 74 aa7□□□□□ -1.29
SYNE3-205ENST00000557275 LMO1P25800 156 aa7□□□□□ -1.29
SYNE3-205ENST00000557275 PTH2Q96A98 100 aa7□□□□□ -1.29
SYNE3-205ENST00000557275 CD59P13987 128 aa6.99□□□□□ -1.29
SYNE3-205ENST00000557275 IGFBP6P24592 240 aaPredicted RBP6.99□□□□□ -1.29
SYNE3-205ENST00000557275 MPLKIPQ8TAP9 179 aa6.99□□□□□ -1.29
SYNE3-205ENST00000557275 HIST2H2BDQ6DRA6 164 aa6.99□□□□□ -1.29
SYNE3-205ENST00000557275 E9PLD3 99 aa6.99□□□□□ -1.29
SYNE3-205ENST00000557275 ADCYAP1P18509 176 aa6.99□□□□□ -1.29
SYNE3-205ENST00000557275 CSRP3P50461 194 aa6.99□□□□□ -1.29
SYNE3-205ENST00000557275 C4orf51C9J302 202 aa6.99□□□□□ -1.29
SYNE3-205ENST00000557275 ATP6V0E1O15342 81 aa6.99□□□□□ -1.29
SYNE3-205ENST00000557275 KLK9Q9UKQ9 250 aa6.99□□□□□ -1.29
SYNE3-205ENST00000557275 IGHV3-16A0A0C4DH30 117 aa6.98□□□□□ -1.29
SYNE3-205ENST00000557275 Q8N9L7 120 aa6.98□□□□□ -1.29
SYNE3-205ENST00000557275 PRB4P10163 310 aaPredicted RBP6.98□□□□□ -1.29
SYNE3-205ENST00000557275 C5orf24Q7Z6I8 188 aa6.98□□□□□ -1.29
SYNE3-205ENST00000557275 USP24Q9UPU5 2620 aa6.98□□□□□ -1.29
SYNE3-205ENST00000557275 COX7BP24311 80 aa6.98□□□□□ -1.29
SYNE3-205ENST00000557275 C16orf54Q6UWD8 224 aa6.98□□□□□ -1.29
SYNE3-205ENST00000557275 RNF138Q8WVD3 245 aa6.98□□□□□ -1.29
SYNE3-205ENST00000557275 FAM219BQ5XKK7 198 aa6.98□□□□□ -1.29
SYNE3-205ENST00000557275 QRFPP83859 136 aa6.98□□□□□ -1.29
SYNE3-205ENST00000557275 COL11A2P13942 1736 aaPredicted RBP6.98□□□□□ -1.29
SYNE3-205ENST00000557275 SPART-AS1P0CW21 52 aa6.98□□□□□ -1.29
SYNE3-205ENST00000557275 LECT2O14960 151 aa6.98□□□□□ -1.29
SYNE3-205ENST00000557275 UBE2D2P62837 147 aa6.98□□□□□ -1.29
SYNE3-205ENST00000557275 FXYD5Q96DB9 178 aa6.98□□□□□ -1.29
SYNE3-205ENST00000557275 IGKV1D-8A0A087WSZ0 117 aa6.98□□□□□ -1.29
SYNE3-205ENST00000557275 EFNA2O43921 213 aa6.98□□□□□ -1.29
SYNE3-205ENST00000557275 SERP2Q8N6R1 65 aa6.98□□□□□ -1.29
SYNE3-205ENST00000557275 CYYR1Q96J86 154 aa6.98□□□□□ -1.29
SYNE3-205ENST00000557275 LINC00479Q96M42 142 aa6.98□□□□□ -1.29
SYNE3-205ENST00000557275 TRAV26-2A0A0B4J265 109 aa6.98□□□□□ -1.29
SYNE3-205ENST00000557275 H7C423 109 aa6.98□□□□□ -1.29
SYNE3-205ENST00000557275 MBD3L4A6NDZ8 208 aaPredicted RBP6.97□□□□□ -1.29
SYNE3-205ENST00000557275 MBD3L3A6NE82 208 aaPredicted RBP6.97□□□□□ -1.29
SYNE3-205ENST00000557275 MBD3L5A6NJ08 208 aaPredicted RBP6.97□□□□□ -1.29
SYNE3-205ENST00000557275 MBD3L2Q8NHZ7 208 aaPredicted RBP6.97□□□□□ -1.29
SYNE3-205ENST00000557275 TOMM6Q96B49 74 aa6.97□□□□□ -1.29
SYNE3-205ENST00000557275 RNF183Q96D59 192 aa6.97□□□□□ -1.29
SYNE3-205ENST00000557275 IGKV1OR2-108A0A075B7D4 117 aa6.97□□□□□ -1.29
SYNE3-205ENST00000557275 IGKV1-27A0A075B6S5 117 aa6.97□□□□□ -1.29
SYNE3-205ENST00000557275 ZNF837Q96EG3 531 aaPredicted RBP6.97□□□□□ -1.29
SYNE3-205ENST00000557275 IGKV1D-17A0A075B6S4 117 aa6.96□□□□□ -1.29
SYNE3-205ENST00000557275 WI2-2373I1.2A0A1W2PRP0 233 aa6.96□□□□□ -1.29
SYNE3-205ENST00000557275 GGNQ86UU5 652 aa6.96□□□□□ -1.29
SYNE3-205ENST00000557275 IGKV1-12A0A0C4DH73 117 aa6.96□□□□□ -1.3
SYNE3-205ENST00000557275 IGKV1D-12P01611 117 aa6.96□□□□□ -1.3
SYNE3-205ENST00000557275 LRRC75A-AS1Q8N1F1 130 aa6.96□□□□□ -1.3
SYNE3-205ENST00000557275 C9orf66Q5T8R8 295 aa6.96□□□□□ -1.3
SYNE3-205ENST00000557275 PCP2Q8IVA1 136 aa6.96□□□□□ -1.3
SYNE3-205ENST00000557275 NOP10Q9NPE3 64 aaKnown RBP6.96□□□□□ -1.3
SYNE3-205ENST00000557275 TRAV23DV6A0A075B6W5 121 aa6.96□□□□□ -1.3
SYNE3-205ENST00000557275 SPRR3Q9UBC9 169 aa6.96□□□□□ -1.3
SYNE3-205ENST00000557275 K7ENP7 123 aa6.95□□□□□ -1.3
SYNE3-205ENST00000557275 MIAQ16674 131 aa6.95□□□□□ -1.3
SYNE3-205ENST00000557275 C20orf197Q8N268 126 aa6.95□□□□□ -1.3
SYNE3-205ENST00000557275 ZNF706Q9Y5V0 76 aaPredicted RBP6.95□□□□□ -1.3
SYNE3-205ENST00000557275 GATA1P15976 413 aaPredicted RBP6.95□□□□□ -1.3
SYNE3-205ENST00000557275 MUC7Q8TAX7 377 aa6.95□□□□□ -1.3
SYNE3-205ENST00000557275 A0A0J9YXY3 114 aa6.95□□□□□ -1.3
SYNE3-205ENST00000557275 TIMM17BO60830 172 aa6.95□□□□□ -1.3
SYNE3-205ENST00000557275 CFHR3Q02985 330 aa6.95□□□□□ -1.3
SYNE3-205ENST00000557275 KLK5Q9Y337 293 aaPredicted RBP6.95□□□□□ -1.3
SYNE3-205ENST00000557275 PMAIP1Q13794 54 aa6.95□□□□□ -1.3
SYNE3-205ENST00000557275 TRBV10-1A0A0K0K1A3 114 aa6.95□□□□□ -1.3
SYNE3-205ENST00000557275 A0A0U1RQV1 116 aa6.95□□□□□ -1.3
SYNE3-205ENST00000557275 NDUFA11Q86Y39 141 aa6.95□□□□□ -1.3
SYNE3-205ENST00000557275 SLX1AQ9BQ83 275 aa6.95□□□□□ -1.3
SYNE3-205ENST00000557275 GYPEP15421 78 aa6.95□□□□□ -1.3
SYNE3-205ENST00000557275 LYPD6BQ8NI32 183 aa6.94□□□□□ -1.3
SYNE3-205ENST00000557275 UFSP1Q6NVU6 142 aa6.94□□□□□ -1.3
SYNE3-205ENST00000557275 CLPSL2Q6UWE3 100 aa6.94□□□□□ -1.3
SYNE3-205ENST00000557275 USP9YO00507 2555 aaPredicted RBP6.94□□□□□ -1.3
SYNE3-205ENST00000557275 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.94□□□□□ -1.3
SYNE3-205ENST00000557275 PRB2P02812 416 aaPredicted RBP6.94□□□□□ -1.3
SYNE3-205ENST00000557275 IGHV3-38A0A0C4DH36 116 aa6.94□□□□□ -1.3
SYNE3-205ENST00000557275 VPREB3Q9UKI3 123 aa6.94□□□□□ -1.3
SYNE3-205ENST00000557275 IGHV4-4A0A075B6R2 117 aa6.93□□□□□ -1.3
SYNE3-205ENST00000557275 CRIPAKQ8N1N5 446 aa6.93□□□□□ -1.3
SYNE3-205ENST00000557275 LOXL1Q08397 574 aaPredicted RBP6.93□□□□□ -1.3
SYNE3-205ENST00000557275 NRACQ8N912 160 aa6.93□□□□□ -1.3
SYNE3-205ENST00000557275 CTRLP40313 264 aa6.93□□□□□ -1.3
SYNE3-205ENST00000557275 BRD3OSQ6XYD6 125 aa6.93□□□□□ -1.3
SYNE3-205ENST00000557275 UBE2D4Q9Y2X8 147 aa6.93□□□□□ -1.3
SYNE3-205ENST00000557275 SMIM26A0A096LP01 95 aa6.93□□□□□ -1.3
SYNE3-205ENST00000557275 WISP1O95388 367 aa6.93□□□□□ -1.3
SYNE3-205ENST00000557275 BPESC1Q9GZL8 116 aa6.93□□□□□ -1.3
SYNE3-205ENST00000557275 CCDC140Q96MF4 163 aa6.93□□□□□ -1.3
SYNE3-205ENST00000557275 SPRY4Q9C004 299 aa6.93□□□□□ -1.3
SYNE3-205ENST00000557275 MDFICQ9P1T7 246 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms