RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 MUC4Q99102 2169 aa8.81□□□□□ -1
SHMT2-221ENST00000555773 TRAV10A0A0B4J240 114 aa8.81□□□□□ -1
SHMT2-221ENST00000555773 SMIM17P0DL12 118 aa8.81□□□□□ -1
SHMT2-221ENST00000555773 ATRAIDQ6UW56 229 aa8.81□□□□□ -1
SHMT2-221ENST00000555773 ZNF479Q96JC4 524 aa8.81□□□□□ -1
SHMT2-221ENST00000555773 WWC2-AS2Q96NR7 200 aa8.81□□□□□ -1
SHMT2-221ENST00000555773 JPT2Q9H910 190 aa8.81□□□□□ -1
SHMT2-221ENST00000555773 DEFB131BA0A096LNP1 70 aa8.8□□□□□ -1
SHMT2-221ENST00000555773 ATP6V1G1O75348 118 aa8.8□□□□□ -1
SHMT2-221ENST00000555773 IGHV3-53P01767 116 aa8.8□□□□□ -1
SHMT2-221ENST00000555773 UFSP1Q6NVU6 142 aa8.8□□□□□ -1
SHMT2-221ENST00000555773 C14orf178Q8N769 122 aaPredicted RBP8.8□□□□□ -1
SHMT2-221ENST00000555773 SAMD10Q9BYL1 202 aa8.8□□□□□ -1
SHMT2-221ENST00000555773 SMCO4Q9NRQ5 59 aa8.8□□□□□ -1
SHMT2-221ENST00000555773 KIF25-AS1Q9Y6Z4 181 aa8.8□□□□□ -1
SHMT2-221ENST00000555773 A0A087WWL8 130 aa8.79□□□□□ -1
SHMT2-221ENST00000555773 TRGV4A0A0C4DH28 118 aa8.79□□□□□ -1
SHMT2-221ENST00000555773 A0A1B0GXF2 115 aa8.79□□□□□ -1
SHMT2-221ENST00000555773 F5H768 121 aa8.79□□□□□ -1
SHMT2-221ENST00000555773 EVI2AP22794 236 aa8.79□□□□□ -1
SHMT2-221ENST00000555773 HBBP68871 147 aa8.79□□□□□ -1
SHMT2-221ENST00000555773 FHL2Q14192 279 aa8.79□□□□□ -1
SHMT2-221ENST00000555773 RASL11AQ6T310 242 aa8.79□□□□□ -1
SHMT2-221ENST00000555773 PHLDA1Q8WV24 401 aaPredicted RBP8.79□□□□□ -1
SHMT2-221ENST00000555773 FAM210BQ96KR6 192 aa8.79□□□□□ -1
SHMT2-221ENST00000555773 TMEM191AQ9H0A3 160 aa8.79□□□□□ -1
SHMT2-221ENST00000555773 DPH3P1Q9H4G8 78 aa8.79□□□□□ -1
SHMT2-221ENST00000555773 PRO0255Q9UI72 69 aa8.79□□□□□ -1
SHMT2-221ENST00000555773 HHLA3Q9XRX5 114 aa8.79□□□□□ -1
SHMT2-221ENST00000555773 URGCP-MRPS24S4R325 110 aa8.79□□□□□ -1
SHMT2-221ENST00000555773 TRBV6-4A0A1B0GX49 114 aa8.78□□□□□ -1
SHMT2-221ENST00000555773 HTN3P15516 51 aa8.78□□□□□ -1
SHMT2-221ENST00000555773 GATA1P15976 413 aaPredicted RBP8.78□□□□□ -1
SHMT2-221ENST00000555773 HOXA5P20719 270 aa8.78□□□□□ -1
SHMT2-221ENST00000555773 CAMPP49913 170 aa8.78□□□□□ -1
SHMT2-221ENST00000555773 LINC00315P59091 139 aa8.78□□□□□ -1
SHMT2-221ENST00000555773 RAB4BP61018 213 aa8.78□□□□□ -1
SHMT2-221ENST00000555773 FAM74A4Q5TZK3 123 aa8.78□□□□□ -1
SHMT2-221ENST00000555773 MRPL54Q6P161 138 aaKnown RBP8.78□□□□□ -1
SHMT2-221ENST00000555773 FRZBQ92765 325 aa8.78□□□□□ -1
SHMT2-221ENST00000555773 IGHV3-73A0A0B4J1V6 119 aa8.77□□□□□ -1.01
SHMT2-221ENST00000555773 COX19Q49B96 90 aa8.77□□□□□ -1.01
SHMT2-221ENST00000555773 CEMP1Q6PRD7 247 aaPredicted RBP8.77□□□□□ -1.01
SHMT2-221ENST00000555773 GATD1Q8NB37 220 aa8.77□□□□□ -1.01
SHMT2-221ENST00000555773 TRBV24-1A0A075B6N3 115 aa8.76□□□□□ -1.01
SHMT2-221ENST00000555773 NUPR2A6NF83 97 aa8.76□□□□□ -1.01
SHMT2-221ENST00000555773 F5H697 171 aa8.76□□□□□ -1.01
SHMT2-221ENST00000555773 H3BNG1 76 aa8.76□□□□□ -1.01
SHMT2-221ENST00000555773 CRYBA4P53673 196 aa8.76□□□□□ -1.01
SHMT2-221ENST00000555773 ELOBQ15370 118 aa8.76□□□□□ -1.01
SHMT2-221ENST00000555773 MUC7Q8TAX7 377 aa8.76□□□□□ -1.01
SHMT2-221ENST00000555773 KLK5Q9Y337 293 aaPredicted RBP8.76□□□□□ -1.01
SHMT2-221ENST00000555773 PAX4O43316 350 aa8.75□□□□□ -1.01
SHMT2-221ENST00000555773 ZNF56Q15929 161 aa8.75□□□□□ -1.01
SHMT2-221ENST00000555773 FAM104BQ5XKR9 115 aa8.75□□□□□ -1.01
SHMT2-221ENST00000555773 Q6ZSN1 163 aa8.75□□□□□ -1.01
SHMT2-221ENST00000555773 SLC25A29Q8N8R3 303 aa8.75□□□□□ -1.01
SHMT2-221ENST00000555773 PRADC1Q9BSG0 188 aa8.75□□□□□ -1.01
SHMT2-221ENST00000555773 TRAV26-1A0A087WT03 109 aa8.74□□□□□ -1.01
SHMT2-221ENST00000555773 TRBV10-1A0A0K0K1A3 114 aa8.74□□□□□ -1.01
SHMT2-221ENST00000555773 H7C1H1 209 aa8.74□□□□□ -1.01
SHMT2-221ENST00000555773 MGPP08493 103 aa8.74□□□□□ -1.01
SHMT2-221ENST00000555773 RAB4AP20338 218 aa8.74□□□□□ -1.01
SHMT2-221ENST00000555773 RHOHQ15669 191 aa8.74□□□□□ -1.01
SHMT2-221ENST00000555773 TMEM88Q6PEY1 159 aa8.74□□□□□ -1.01
SHMT2-221ENST00000555773 CBLN2Q8IUK8 224 aa8.74□□□□□ -1.01
SHMT2-221ENST00000555773 YPEL4Q96NS1 127 aa8.74□□□□□ -1.01
SHMT2-221ENST00000555773 GNB1LQ9BYB4 327 aa8.74□□□□□ -1.01
SHMT2-221ENST00000555773 TGIF2-C20orf24A0A0A6YYL0 155 aa8.73□□□□□ -1.01
SHMT2-221ENST00000555773 C3orf84H3BNL1 204 aa8.73□□□□□ -1.01
SHMT2-221ENST00000555773 K7EQD1 137 aa8.73□□□□□ -1.01
SHMT2-221ENST00000555773 TCTAP57738 103 aa8.73□□□□□ -1.01
SHMT2-221ENST00000555773 AMN1Q8IY45 258 aa8.73□□□□□ -1.01
SHMT2-221ENST00000555773 C15orf53Q8NAA6 179 aa8.73□□□□□ -1.01
SHMT2-221ENST00000555773 MRAP2Q96G30 205 aa8.73□□□□□ -1.01
SHMT2-221ENST00000555773 RNF185Q96GF1 192 aa8.73□□□□□ -1.01
SHMT2-221ENST00000555773 VSIG2Q96IQ7 327 aa8.73□□□□□ -1.01
SHMT2-221ENST00000555773 A0A0J9YY99 117 aa8.72□□□□□ -1.01
SHMT2-221ENST00000555773 IGLL5B9A064 214 aa8.72□□□□□ -1.01
SHMT2-221ENST00000555773 M0QY20 66 aa8.72□□□□□ -1.01
SHMT2-221ENST00000555773 PPP1R17O96001 155 aa8.72□□□□□ -1.01
SHMT2-221ENST00000555773 MT-ND6P03923 174 aa8.72□□□□□ -1.01
SHMT2-221ENST00000555773 SUMO4Q6EEV6 95 aa8.72□□□□□ -1.01
SHMT2-221ENST00000555773 TMEM136Q6ZRR5 245 aa8.72□□□□□ -1.01
SHMT2-221ENST00000555773 HLA-DQA1P01909 254 aa8.71□□□□□ -1.02
SHMT2-221ENST00000555773 PPBPP02775 128 aa8.71□□□□□ -1.02
SHMT2-221ENST00000555773 GYPEP15421 78 aa8.71□□□□□ -1.02
SHMT2-221ENST00000555773 MRPL23Q16540 153 aaKnown RBP8.71□□□□□ -1.02
SHMT2-221ENST00000555773 SH2D6Q7Z4S9 175 aa8.71□□□□□ -1.02
SHMT2-221ENST00000555773 DNAJC30Q96LL9 226 aa8.71□□□□□ -1.02
SHMT2-221ENST00000555773 NIT2Q9NQR4 276 aa8.71□□□□□ -1.02
SHMT2-221ENST00000555773 CKS2P33552 79 aa8.7□□□□□ -1.02
SHMT2-221ENST00000555773 RPL36AP83881 106 aaKnown RBP8.7□□□□□ -1.02
SHMT2-221ENST00000555773 MRPL51Q4U2R6 128 aaKnown RBP8.7□□□□□ -1.02
SHMT2-221ENST00000555773 RPL36ALQ969Q0 106 aaKnown RBP8.7□□□□□ -1.02
SHMT2-221ENST00000555773 ICOSQ9Y6W8 199 aa8.7□□□□□ -1.02
SHMT2-221ENST00000555773 TRBV7-3A0A075B6L6 115 aa8.69□□□□□ -1.02
SHMT2-221ENST00000555773 TRAV26-2A0A0B4J265 109 aa8.69□□□□□ -1.02
SHMT2-221ENST00000555773 SCO1O75880 301 aa8.69□□□□□ -1.02
SHMT2-221ENST00000555773 APCSP02743 223 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms