RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 SMIM17P0DL12 118 aa4.38□□□□□ -1.71
FOXN3-205ENST00000553904 CRIP1P50238 77 aa4.38□□□□□ -1.71
FOXN3-205ENST00000553904 RAB5CP51148 216 aa4.38□□□□□ -1.71
FOXN3-205ENST00000553904 RAB4BP61018 213 aa4.38□□□□□ -1.71
FOXN3-205ENST00000553904 PKIAP61925 76 aa4.38□□□□□ -1.71
FOXN3-205ENST00000553904 Q0VG73 95 aa4.38□□□□□ -1.71
FOXN3-205ENST00000553904 LINC01559Q495D7 138 aa4.38□□□□□ -1.71
FOXN3-205ENST00000553904 TMEM97Q5BJF2 176 aa4.38□□□□□ -1.71
FOXN3-205ENST00000553904 DAZAP1Q96EP5 407 aaKnown RBP4.38□□□□□ -1.71
FOXN3-205ENST00000553904 TMEM70Q9BUB7 260 aa4.38□□□□□ -1.71
FOXN3-205ENST00000553904 CHCHD7Q9BUK0 85 aa4.38□□□□□ -1.71
FOXN3-205ENST00000553904 MUC4Q99102 2169 aa4.37□□□□□ -1.71
FOXN3-205ENST00000553904 TMSB15BA0A087X1C1 80 aa4.37□□□□□ -1.71
FOXN3-205ENST00000553904 XKRY2A2RUG3 117 aa4.37□□□□□ -1.71
FOXN3-205ENST00000553904 TMEM262E9PQX1 116 aa4.37□□□□□ -1.71
FOXN3-205ENST00000553904 CXCL1P09341 107 aa4.37□□□□□ -1.71
FOXN3-205ENST00000553904 SPANXN1Q5VSR9 72 aa4.37□□□□□ -1.71
FOXN3-205ENST00000553904 UFSP1Q6NVU6 142 aa4.37□□□□□ -1.71
FOXN3-205ENST00000553904 Q6ZSN1 163 aa4.37□□□□□ -1.71
FOXN3-205ENST00000553904 Q8N814 137 aa4.37□□□□□ -1.71
FOXN3-205ENST00000553904 Q8N976 141 aa4.37□□□□□ -1.71
FOXN3-205ENST00000553904 SAMD10Q9BYL1 202 aa4.37□□□□□ -1.71
FOXN3-205ENST00000553904 KRTAP4-5Q9BYR2 181 aa4.37□□□□□ -1.71
FOXN3-205ENST00000553904 JPT2Q9H910 190 aa4.37□□□□□ -1.71
FOXN3-205ENST00000553904 MANBALQ9NQG1 85 aa4.37□□□□□ -1.71
FOXN3-205ENST00000553904 BIN3Q9NQY0 253 aa4.37□□□□□ -1.71
FOXN3-205ENST00000553904 A0A087WWL8 130 aa4.36□□□□□ -1.71
FOXN3-205ENST00000553904 LRCOL1A6NCL2 159 aa4.36□□□□□ -1.71
FOXN3-205ENST00000553904 F5H697 171 aa4.36□□□□□ -1.71
FOXN3-205ENST00000553904 G3V3Q6 166 aa4.36□□□□□ -1.71
FOXN3-205ENST00000553904 BCL2L11O43521 198 aa4.36□□□□□ -1.71
FOXN3-205ENST00000553904 OR5AL1P0C617 328 aa4.36□□□□□ -1.71
FOXN3-205ENST00000553904 INAFM2P0DMQ5 153 aa4.36□□□□□ -1.71
FOXN3-205ENST00000553904 TAGLN2P37802 199 aaKnown RBP4.36□□□□□ -1.71
FOXN3-205ENST00000553904 XGP55808 180 aa4.36□□□□□ -1.71
FOXN3-205ENST00000553904 RPS20P60866 119 aaKnown RBP4.36□□□□□ -1.71
FOXN3-205ENST00000553904 NIT1Q86X76 327 aa4.36□□□□□ -1.71
FOXN3-205ENST00000553904 C14orf178Q8N769 122 aaPredicted RBP4.36□□□□□ -1.71
FOXN3-205ENST00000553904 SMIM12Q96EX1 92 aa4.36□□□□□ -1.71
FOXN3-205ENST00000553904 SSBP4Q9BWG4 385 aaPredicted RBP4.36□□□□□ -1.71
FOXN3-205ENST00000553904 FRAS1Q86XX4 4008 aa4.36□□□□□ -1.71
FOXN3-205ENST00000553904 IGKV2D-24A0A075B6R9 120 aa4.35□□□□□ -1.71
FOXN3-205ENST00000553904 TRAV1-1A0A0B4J248 108 aa4.35□□□□□ -1.71
FOXN3-205ENST00000553904 F2Z2F3 143 aa4.35□□□□□ -1.71
FOXN3-205ENST00000553904 SMLR1H3BR10 107 aa4.35□□□□□ -1.71
FOXN3-205ENST00000553904 H7C1H1 209 aa4.35□□□□□ -1.71
FOXN3-205ENST00000553904 PDE6DO43924 150 aa4.35□□□□□ -1.71
FOXN3-205ENST00000553904 IFNA1P01562 189 aa4.35□□□□□ -1.71
FOXN3-205ENST00000553904 LINC00694P0DN24 101 aa4.35□□□□□ -1.71
FOXN3-205ENST00000553904 KRTAP10-1P60331 282 aa4.35□□□□□ -1.71
FOXN3-205ENST00000553904 ZNF56Q15929 161 aa4.35□□□□□ -1.71
FOXN3-205ENST00000553904 C14orf177Q52M58 125 aa4.35□□□□□ -1.71
FOXN3-205ENST00000553904 PRR27Q6MZM9 219 aa4.35□□□□□ -1.71
FOXN3-205ENST00000553904 DAZ4Q86SG3 579 aaKnown RBP4.35□□□□□ -1.71
FOXN3-205ENST00000553904 MLST8Q9BVC4 326 aa4.35□□□□□ -1.71
FOXN3-205ENST00000553904 DAZ3Q9NR90 486 aaKnown RBP4.35□□□□□ -1.71
FOXN3-205ENST00000553904 KLK12Q9UKR0 248 aa4.35□□□□□ -1.71
FOXN3-205ENST00000553904 TRBV6-8A0A0A6YYG3 113 aa4.34□□□□□ -1.71
FOXN3-205ENST00000553904 A0A1B0GV50 99 aa4.34□□□□□ -1.71
FOXN3-205ENST00000553904 SCO2A0A1W2PP80 73 aa4.34□□□□□ -1.71
FOXN3-205ENST00000553904 RBFOX3A6NFN3 312 aa4.34□□□□□ -1.71
FOXN3-205ENST00000553904 SNAI2O43623 268 aa4.34□□□□□ -1.71
FOXN3-205ENST00000553904 CRPP02741 224 aa4.34□□□□□ -1.71
FOXN3-205ENST00000553904 FUSP35637 526 aaKnown RBP eCLIP4.34□□□□□ -1.71
FOXN3-205ENST00000553904 RPL35P42766 123 aaKnown RBP4.34□□□□□ -1.71
FOXN3-205ENST00000553904 UBE2D3P61077 147 aa4.34□□□□□ -1.71
FOXN3-205ENST00000553904 UBE2D2P62837 147 aa4.34□□□□□ -1.71
FOXN3-205ENST00000553904 CACNG7P62955 275 aa4.34□□□□□ -1.71
FOXN3-205ENST00000553904 OR10G8Q8NGN5 311 aa4.34□□□□□ -1.71
FOXN3-205ENST00000553904 UBE2WQ96B02 151 aa4.34□□□□□ -1.71
FOXN3-205ENST00000553904 DNAJC30Q96LL9 226 aa4.34□□□□□ -1.71
FOXN3-205ENST00000553904 GNG13Q9P2W3 67 aa4.34□□□□□ -1.71
FOXN3-205ENST00000553904 VPS13DQ5THJ4 4388 aa4.33□□□□□ -1.72
FOXN3-205ENST00000553904 PLA2G1BP04054 148 aaKnown RBP4.33□□□□□ -1.72
FOXN3-205ENST00000553904 GNG4P50150 75 aa4.33□□□□□ -1.72
FOXN3-205ENST00000553904 SULT1A2P50226 295 aa4.33□□□□□ -1.72
FOXN3-205ENST00000553904 CCL20P78556 96 aa4.33□□□□□ -1.72
FOXN3-205ENST00000553904 Q5VSD8 79 aa4.33□□□□□ -1.72
FOXN3-205ENST00000553904 FER1L6-AS1Q8NA97 138 aa4.33□□□□□ -1.72
FOXN3-205ENST00000553904 OR10AG1Q8NH19 301 aa4.33□□□□□ -1.72
FOXN3-205ENST00000553904 BAALCQ8WXS3 180 aa4.33□□□□□ -1.72
FOXN3-205ENST00000553904 AP1S3Q96PC3 154 aa4.33□□□□□ -1.72
FOXN3-205ENST00000553904 CHCHD5Q9BSY4 110 aa4.33□□□□□ -1.72
FOXN3-205ENST00000553904 C1orf43Q9BWL3 253 aa4.33□□□□□ -1.72
FOXN3-205ENST00000553904 MED9Q9NWA0 146 aa4.33□□□□□ -1.72
FOXN3-205ENST00000553904 Q9UF83 564 aa4.33□□□□□ -1.72
FOXN3-205ENST00000553904 TRBV25-1A0A075B6N4 114 aa4.32□□□□□ -1.72
FOXN3-205ENST00000553904 P01737 135 aa4.32□□□□□ -1.72
FOXN3-205ENST00000553904 SMR3BP02814 79 aaPredicted RBP4.32□□□□□ -1.72
FOXN3-205ENST00000553904 ANGP03950 147 aaKnown RBP4.32□□□□□ -1.72
FOXN3-205ENST00000553904 TRGC1P0CF51 173 aa4.32□□□□□ -1.72
FOXN3-205ENST00000553904 SSTP61278 116 aa4.32□□□□□ -1.72
FOXN3-205ENST00000553904 RPL19P84098 196 aaKnown RBP4.32□□□□□ -1.72
FOXN3-205ENST00000553904 MEF2BQ02080 365 aaPredicted RBP4.32□□□□□ -1.72
FOXN3-205ENST00000553904 MIAQ16674 131 aa4.32□□□□□ -1.72
FOXN3-205ENST00000553904 WDR73Q6P4I2 378 aa4.32□□□□□ -1.72
FOXN3-205ENST00000553904 SMIM15Q7Z3B0 74 aa4.32□□□□□ -1.72
FOXN3-205ENST00000553904 NEXN-AS1Q8NBZ9 246 aa4.32□□□□□ -1.72
FOXN3-205ENST00000553904 OR2D3Q8NGH3 330 aa4.32□□□□□ -1.72
FOXN3-205ENST00000553904 C11orf52Q96A22 123 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms