RNA–Protein interactions for RNA: ENST00000553116.5

RAB5B-210, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 3,322 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-210ENST00000553116 AP5S1Q9NUS5 200 aa6.14□□□□□ -1.43
RAB5B-210ENST00000553116 TRAV25A0A0B4J276 109 aa6.14□□□□□ -1.43
RAB5B-210ENST00000553116 OR11H12B2RN74 326 aa6.14□□□□□ -1.43
RAB5B-210ENST00000553116 MGPP08493 103 aa6.14□□□□□ -1.43
RAB5B-210ENST00000553116 H3BMM0 161 aa6.13□□□□□ -1.43
RAB5B-210ENST00000553116 SMIM17P0DL12 118 aa6.13□□□□□ -1.43
RAB5B-210ENST00000553116 NDUFA11Q86Y39 141 aa6.13□□□□□ -1.43
RAB5B-210ENST00000553116 STHQ8IWL8 128 aa6.13□□□□□ -1.43
RAB5B-210ENST00000553116 CHTOPQ9Y3Y2 248 aaKnown RBP6.13□□□□□ -1.43
RAB5B-210ENST00000553116 IGHV1OR15-1A0A075B7D0 117 aa6.13□□□□□ -1.43
RAB5B-210ENST00000553116 NUDT3O95989 172 aa6.13□□□□□ -1.43
RAB5B-210ENST00000553116 NPYP01303 97 aa6.13□□□□□ -1.43
RAB5B-210ENST00000553116 PPBPP02775 128 aa6.13□□□□□ -1.43
RAB5B-210ENST00000553116 IGLC3P0DOY3 106 aa6.13□□□□□ -1.43
RAB5B-210ENST00000553116 IFI27P40305 119 aaPredicted RBP6.13□□□□□ -1.43
RAB5B-210ENST00000553116 C14orf178Q8N769 122 aaPredicted RBP6.13□□□□□ -1.43
RAB5B-210ENST00000553116 AP1S3Q96PC3 154 aa6.13□□□□□ -1.43
RAB5B-210ENST00000553116 C20orf144Q9BQM9 153 aa6.13□□□□□ -1.43
RAB5B-210ENST00000553116 MAP1LC3AQ9H492 121 aa6.13□□□□□ -1.43
RAB5B-210ENST00000553116 ATRQ13535 2644 aa6.13□□□□□ -1.43
RAB5B-210ENST00000553116 GAGE12BA1L429 117 aa6.12□□□□□ -1.43
RAB5B-210ENST00000553116 RNASE3P12724 160 aaKnown RBP6.12□□□□□ -1.43
RAB5B-210ENST00000553116 TEX43Q6ZNM6 134 aa6.12□□□□□ -1.43
RAB5B-210ENST00000553116 ORAOV1Q8WV07 137 aa6.12□□□□□ -1.43
RAB5B-210ENST00000553116 UQCR10Q9UDW1 63 aa6.12□□□□□ -1.43
RAB5B-210ENST00000553116 MUC4Q99102 2169 aa6.12□□□□□ -1.43
RAB5B-210ENST00000553116 BAHCC1Q9P281 2608 aa6.12□□□□□ -1.43
RAB5B-210ENST00000553116 TRAV26-2A0A0B4J265 109 aa6.12□□□□□ -1.43
RAB5B-210ENST00000553116 IGHV1-24A0A0C4DH33 117 aa6.12□□□□□ -1.43
RAB5B-210ENST00000553116 K7EP13 123 aa6.12□□□□□ -1.43
RAB5B-210ENST00000553116 LEPROTL1O95214 131 aa6.12□□□□□ -1.43
RAB5B-210ENST00000553116 AMTNQ6UX39 209 aa6.12□□□□□ -1.43
RAB5B-210ENST00000553116 RAB37Q96AX2 223 aa6.12□□□□□ -1.43
RAB5B-210ENST00000553116 RNF185Q96GF1 192 aa6.12□□□□□ -1.43
RAB5B-210ENST00000553116 URB1-AS1Q96HZ7 61 aa6.12□□□□□ -1.43
RAB5B-210ENST00000553116 ZNF256Q9Y2P7 627 aaPredicted RBP6.12□□□□□ -1.43
RAB5B-210ENST00000553116 ADARB2-AS1A8MUL3 147 aa6.12□□□□□ -1.43
RAB5B-210ENST00000553116 MED14OSP0DP75 135 aa6.12□□□□□ -1.43
RAB5B-210ENST00000553116 RPL24P83731 157 aaKnown RBP6.12□□□□□ -1.43
RAB5B-210ENST00000553116 Q8N1Y9 231 aa6.12□□□□□ -1.43
RAB5B-210ENST00000553116 DPH3P1Q9H4G8 78 aa6.12□□□□□ -1.43
RAB5B-210ENST00000553116 SIGLEC8Q9NYZ4 499 aa6.12□□□□□ -1.43
RAB5B-210ENST00000553116 GATA1P15976 413 aaPredicted RBP6.11□□□□□ -1.43
RAB5B-210ENST00000553116 KRTAP10-3P60369 221 aa6.11□□□□□ -1.43
RAB5B-210ENST00000553116 ODF3L2Q3SX64 289 aa6.11□□□□□ -1.43
RAB5B-210ENST00000553116 TRGV11A0A075B6L2 103 aa6.11□□□□□ -1.43
RAB5B-210ENST00000553116 IGHV4-4A0A075B6R2 117 aa6.11□□□□□ -1.43
RAB5B-210ENST00000553116 FAM74A4Q5TZK3 123 aa6.11□□□□□ -1.43
RAB5B-210ENST00000553116 MTURNQ8N3F0 131 aa6.11□□□□□ -1.43
RAB5B-210ENST00000553116 SYT8Q8NBV8 401 aa6.11□□□□□ -1.43
RAB5B-210ENST00000553116 U3KQK5 164 aa6.11□□□□□ -1.43
RAB5B-210ENST00000553116 TEP1Q99973 2627 aaKnown RBP6.11□□□□□ -1.43
RAB5B-210ENST00000553116 IGHV3OR16-12A0A075B7B8 117 aa6.1□□□□□ -1.43
RAB5B-210ENST00000553116 TRAV8-6A0A0B4J262 113 aa6.1□□□□□ -1.43
RAB5B-210ENST00000553116 GAS8-AS1O95177 125 aa6.1□□□□□ -1.43
RAB5B-210ENST00000553116 INSP01308 110 aa6.1□□□□□ -1.43
RAB5B-210ENST00000553116 C3orf79P0CE67 100 aa6.1□□□□□ -1.43
RAB5B-210ENST00000553116 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.1□□□□□ -1.43
RAB5B-210ENST00000553116 MDFICQ9P1T7 246 aa6.1□□□□□ -1.43
RAB5B-210ENST00000553116 hDV102S1A0JD36 115 aa6.1□□□□□ -1.43
RAB5B-210ENST00000553116 RBMY1BA6NDE4 496 aaKnown RBP6.1□□□□□ -1.43
RAB5B-210ENST00000553116 RBMY1EA6NEQ0 496 aaKnown RBP6.1□□□□□ -1.43
RAB5B-210ENST00000553116 F5H697 171 aa6.1□□□□□ -1.43
RAB5B-210ENST00000553116 K7ERU9 68 aa6.1□□□□□ -1.43
RAB5B-210ENST00000553116 RBMY1DP0C7P1 496 aaKnown RBP6.1□□□□□ -1.43
RAB5B-210ENST00000553116 LINC01587Q99440 93 aa6.1□□□□□ -1.43
RAB5B-210ENST00000553116 XCL2Q9UBD3 114 aa6.1□□□□□ -1.43
RAB5B-210ENST00000553116 IGHV3-16A0A0C4DH30 117 aa6.1□□□□□ -1.43
RAB5B-210ENST00000553116 OR2K2Q8NGT1 345 aa6.1□□□□□ -1.43
RAB5B-210ENST00000553116 C1orf43Q9BWL3 253 aa6.1□□□□□ -1.43
RAB5B-210ENST00000553116 SCRT2Q9NQ03 307 aa6.1□□□□□ -1.43
RAB5B-210ENST00000553116 A0A087WWL8 130 aa6.09□□□□□ -1.43
RAB5B-210ENST00000553116 HSPB8Q9UJY1 196 aa6.09□□□□□ -1.43
RAB5B-210ENST00000553116 TRAV26-1A0A087WT03 109 aa6.09□□□□□ -1.43
RAB5B-210ENST00000553116 IGLV1-51P01701 117 aa6.09□□□□□ -1.43
RAB5B-210ENST00000553116 MRAP2Q96G30 205 aa6.09□□□□□ -1.43
RAB5B-210ENST00000553116 CRXO43186 299 aaPredicted RBP6.09□□□□□ -1.44
RAB5B-210ENST00000553116 RBMY1A1P0DJD3 496 aaKnown RBP6.09□□□□□ -1.44
RAB5B-210ENST00000553116 RBMY1CP0DJD4 496 aa6.09□□□□□ -1.44
RAB5B-210ENST00000553116 RBMY1FQ15415 496 aaKnown RBP6.09□□□□□ -1.44
RAB5B-210ENST00000553116 TMEM70Q9BUB7 260 aa6.09□□□□□ -1.44
RAB5B-210ENST00000553116 MAP1LC3CQ9BXW4 147 aa6.09□□□□□ -1.44
RAB5B-210ENST00000553116 WFDC10AQ9H1F0 79 aa6.09□□□□□ -1.44
RAB5B-210ENST00000553116 NXT2Q9NPJ8 142 aaKnown RBP6.09□□□□□ -1.44
RAB5B-210ENST00000553116 TENM1Q9UKZ4 2725 aa6.08□□□□□ -1.44
RAB5B-210ENST00000553116 IGLL1P15814 213 aa6.08□□□□□ -1.44
RAB5B-210ENST00000553116 CMC4P56277 68 aaPredicted RBP6.08□□□□□ -1.44
RAB5B-210ENST00000553116 ZNF56Q15929 161 aa6.08□□□□□ -1.44
RAB5B-210ENST00000553116 LINC00173Q6ZV60 143 aa6.08□□□□□ -1.44
RAB5B-210ENST00000553116 JPT2Q9H910 190 aa6.08□□□□□ -1.44
RAB5B-210ENST00000553116 K7EMI3 77 aa6.08□□□□□ -1.44
RAB5B-210ENST00000553116 HBDP02042 147 aa6.08□□□□□ -1.44
RAB5B-210ENST00000553116 RPL35AP18077 110 aaKnown RBP6.08□□□□□ -1.44
RAB5B-210ENST00000553116 ZNF876PQ49A33 203 aa6.08□□□□□ -1.44
RAB5B-210ENST00000553116 PRM2P04554 102 aa6.07□□□□□ -1.44
RAB5B-210ENST00000553116 LINC00482Q8N8I6 264 aa6.07□□□□□ -1.44
RAB5B-210ENST00000553116 Q8N976 141 aa6.07□□□□□ -1.44
RAB5B-210ENST00000553116 C9orf85Q96MD7 179 aa6.07□□□□□ -1.44
RAB5B-210ENST00000553116 A8MTW9 85 aa6.07□□□□□ -1.44
RAB5B-210ENST00000553116 TAX1BP3O14907 124 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms