RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 TRAV4A0A0B4J268 109 aa8.04□□□□□ -1.12
TMEM116-218ENST00000552839 HIGD1CA8MV81 97 aa8.04□□□□□ -1.12
TMEM116-218ENST00000552839 SNAI2O43623 268 aa8.04□□□□□ -1.12
TMEM116-218ENST00000552839 SNAPINO95295 136 aa8.04□□□□□ -1.12
TMEM116-218ENST00000552839 TRGC1P0CF51 173 aa8.04□□□□□ -1.12
TMEM116-218ENST00000552839 TWIST1Q15672 202 aa8.04□□□□□ -1.12
TMEM116-218ENST00000552839 KCNIP4Q6PIL6 250 aa8.04□□□□□ -1.12
TMEM116-218ENST00000552839 GFRA4Q9GZZ7 299 aa8.04□□□□□ -1.12
TMEM116-218ENST00000552839 NAT8BQ9UHF3 227 aa8.04□□□□□ -1.12
TMEM116-218ENST00000552839 CARHSP1Q9Y2V2 147 aaKnown RBP8.04□□□□□ -1.12
TMEM116-218ENST00000552839 V9GYV3 84 aa8.04□□□□□ -1.12
TMEM116-218ENST00000552839 DNAH2Q9P225 4427 aa8.03□□□□□ -1.12
TMEM116-218ENST00000552839 IGHV4-4A0A075B6R2 117 aa8.03□□□□□ -1.12
TMEM116-218ENST00000552839 RHODO00212 210 aa8.03□□□□□ -1.12
TMEM116-218ENST00000552839 IGLC6P0CF74 106 aa8.03□□□□□ -1.12
TMEM116-218ENST00000552839 S100PP25815 95 aa8.03□□□□□ -1.12
TMEM116-218ENST00000552839 RHEBQ15382 184 aa8.03□□□□□ -1.12
TMEM116-218ENST00000552839 ZNF56Q15929 161 aa8.03□□□□□ -1.12
TMEM116-218ENST00000552839 RASL10AQ92737 203 aa8.03□□□□□ -1.12
TMEM116-218ENST00000552839 RPS10P5Q9NQ39 176 aa8.03□□□□□ -1.12
TMEM116-218ENST00000552839 IGHV3-73A0A0B4J1V6 119 aa8.02□□□□□ -1.13
TMEM116-218ENST00000552839 A0A1B0GUT8 65 aa8.02□□□□□ -1.13
TMEM116-218ENST00000552839 FAM231BA6NCW3 169 aa8.02□□□□□ -1.13
TMEM116-218ENST00000552839 M0R2N4 97 aa8.02□□□□□ -1.13
TMEM116-218ENST00000552839 MGPP08493 103 aa8.02□□□□□ -1.13
TMEM116-218ENST00000552839 CTRLP40313 264 aa8.02□□□□□ -1.13
TMEM116-218ENST00000552839 RIGQ13278 110 aa8.02□□□□□ -1.13
TMEM116-218ENST00000552839 PIK3CD-AS1Q5SR53 167 aa8.02□□□□□ -1.13
TMEM116-218ENST00000552839 DMRTA1Q5VZB9 504 aa8.02□□□□□ -1.13
TMEM116-218ENST00000552839 CLRN3Q8NCR9 226 aa8.02□□□□□ -1.13
TMEM116-218ENST00000552839 PTH2Q96A98 100 aa8.02□□□□□ -1.13
TMEM116-218ENST00000552839 CTDSP1Q9GZU7 261 aa8.02□□□□□ -1.13
TMEM116-218ENST00000552839 SCRT2Q9NQ03 307 aa8.02□□□□□ -1.13
TMEM116-218ENST00000552839 A0A087WWL8 130 aa8.01□□□□□ -1.13
TMEM116-218ENST00000552839 F5H697 171 aa8.01□□□□□ -1.13
TMEM116-218ENST00000552839 CIDEAO60543 219 aa8.01□□□□□ -1.13
TMEM116-218ENST00000552839 S100A8P05109 93 aa8.01□□□□□ -1.13
TMEM116-218ENST00000552839 SLAQ13239 276 aa8.01□□□□□ -1.13
TMEM116-218ENST00000552839 ZNF575Q86XF7 245 aa8.01□□□□□ -1.13
TMEM116-218ENST00000552839 LINC00612Q8N6U2 182 aa8.01□□□□□ -1.13
TMEM116-218ENST00000552839 SSBP4Q9BWG4 385 aaPredicted RBP8.01□□□□□ -1.13
TMEM116-218ENST00000552839 RS1O15537 224 aa8□□□□□ -1.13
TMEM116-218ENST00000552839 NTF3P20783 257 aa8□□□□□ -1.13
TMEM116-218ENST00000552839 CFAP126Q5VTH2 177 aa8□□□□□ -1.13
TMEM116-218ENST00000552839 POM121L12Q8N7R1 296 aa8□□□□□ -1.13
TMEM116-218ENST00000552839 GTSF1Q8WW33 167 aa8□□□□□ -1.13
TMEM116-218ENST00000552839 ZNF479Q96JC4 524 aa8□□□□□ -1.13
TMEM116-218ENST00000552839 C18orf15Q96N68 181 aa8□□□□□ -1.13
TMEM116-218ENST00000552839 PRADC1Q9BSG0 188 aa8□□□□□ -1.13
TMEM116-218ENST00000552839 DNAH17Q9UFH2 4485 aa7.99□□□□□ -1.13
TMEM116-218ENST00000552839 DYNC1H1Q14204 4646 aaKnown RBP7.99□□□□□ -1.13
TMEM116-218ENST00000552839 A0A0J9YY99 117 aa7.99□□□□□ -1.13
TMEM116-218ENST00000552839 SMIM27A0A1W2PRY6 76 aa7.99□□□□□ -1.13
TMEM116-218ENST00000552839 C7orf77A4D0Y5 90 aa7.99□□□□□ -1.13
TMEM116-218ENST00000552839 PAX4O43316 350 aa7.99□□□□□ -1.13
TMEM116-218ENST00000552839 NXPH4O95158 308 aa7.99□□□□□ -1.13
TMEM116-218ENST00000552839 C10orf91Q5T1B1 145 aa7.99□□□□□ -1.13
TMEM116-218ENST00000552839 MRPL54Q6P161 138 aaKnown RBP7.99□□□□□ -1.13
TMEM116-218ENST00000552839 WDR73Q6P4I2 378 aa7.99□□□□□ -1.13
TMEM116-218ENST00000552839 TMEM88Q6PEY1 159 aa7.99□□□□□ -1.13
TMEM116-218ENST00000552839 C14orf178Q8N769 122 aaPredicted RBP7.99□□□□□ -1.13
TMEM116-218ENST00000552839 NUP35Q8NFH5 326 aa7.99□□□□□ -1.13
TMEM116-218ENST00000552839 DPH3P1Q9H4G8 78 aa7.99□□□□□ -1.13
TMEM116-218ENST00000552839 PRO0255Q9UI72 69 aa7.99□□□□□ -1.13
TMEM116-218ENST00000552839 TRAV26-1A0A087WT03 109 aa7.98□□□□□ -1.13
TMEM116-218ENST00000552839 A0A1B0GW15 77 aa7.98□□□□□ -1.13
TMEM116-218ENST00000552839 NUDT3O95989 172 aa7.98□□□□□ -1.13
TMEM116-218ENST00000552839 P0DMU3 169 aa7.98□□□□□ -1.13
TMEM116-218ENST00000552839 FAM231AP0DMU4 169 aa7.98□□□□□ -1.13
TMEM116-218ENST00000552839 FAM231CP0DMU5 169 aa7.98□□□□□ -1.13
TMEM116-218ENST00000552839 CAMPP49913 170 aa7.98□□□□□ -1.13
TMEM116-218ENST00000552839 RAB4BP61018 213 aa7.98□□□□□ -1.13
TMEM116-218ENST00000552839 HBBP68871 147 aa7.98□□□□□ -1.13
TMEM116-218ENST00000552839 RHOHQ15669 191 aa7.98□□□□□ -1.13
TMEM116-218ENST00000552839 ZFP2Q6ZN57 461 aa7.98□□□□□ -1.13
TMEM116-218ENST00000552839 FAM210BQ96KR6 192 aa7.98□□□□□ -1.13
TMEM116-218ENST00000552839 JPT2Q9H910 190 aa7.98□□□□□ -1.13
TMEM116-218ENST00000552839 HHLA3Q9XRX5 114 aa7.98□□□□□ -1.13
TMEM116-218ENST00000552839 A0A087WWC5 75 aa7.97□□□□□ -1.13
TMEM116-218ENST00000552839 H7C1H1 209 aa7.97□□□□□ -1.13
TMEM116-218ENST00000552839 K7EQD1 137 aa7.97□□□□□ -1.13
TMEM116-218ENST00000552839 FOXA3P55318 350 aaPredicted RBP7.97□□□□□ -1.13
TMEM116-218ENST00000552839 FAM3BP58499 235 aaPredicted RBP7.97□□□□□ -1.13
TMEM116-218ENST00000552839 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.97□□□□□ -1.13
TMEM116-218ENST00000552839 C15orf53Q8NAA6 179 aa7.97□□□□□ -1.13
TMEM116-218ENST00000552839 BTF3L4Q96K17 158 aa7.97□□□□□ -1.13
TMEM116-218ENST00000552839 CNFNQ9BYD5 112 aa7.97□□□□□ -1.13
TMEM116-218ENST00000552839 ICOSQ9Y6W8 199 aa7.97□□□□□ -1.13
TMEM116-218ENST00000552839 URGCP-MRPS24S4R325 110 aa7.97□□□□□ -1.13
TMEM116-218ENST00000552839 DNAH11Q96DT5 4516 aa7.96□□□□□ -1.13
TMEM116-218ENST00000552839 GATA1P15976 413 aaPredicted RBP7.96□□□□□ -1.14
TMEM116-218ENST00000552839 HOXA5P20719 270 aa7.96□□□□□ -1.14
TMEM116-218ENST00000552839 SRIP30626 198 aa7.96□□□□□ -1.14
TMEM116-218ENST00000552839 ATP5L2Q7Z4Y8 100 aa7.96□□□□□ -1.14
TMEM116-218ENST00000552839 IMMP2LQ96T52 175 aa7.96□□□□□ -1.14
TMEM116-218ENST00000552839 SAMD10Q9BYL1 202 aa7.96□□□□□ -1.14
TMEM116-218ENST00000552839 MSRB1Q9NZV6 116 aa7.96□□□□□ -1.14
TMEM116-218ENST00000552839 PKD1P98161 4303 aa7.96□□□□□ -1.14
TMEM116-218ENST00000552839 GYPEP15421 78 aa7.95□□□□□ -1.14
TMEM116-218ENST00000552839 EVI2AP22794 236 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms