RNA–Protein interactions for RNA: ENST00000550471.1

GCN1-207, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-207ENST00000550471 GAGE13Q4V321 117 aa13.4□□□□□ -0.26
GCN1-207ENST00000550471 SMLR1H3BR10 107 aa13.39□□□□□ -0.27
GCN1-207ENST00000550471 GCSHP23434 173 aa13.39□□□□□ -0.27
GCN1-207ENST00000550471 CHCHD7Q9BUK0 85 aa13.39□□□□□ -0.27
GCN1-207ENST00000550471 URGCP-MRPS24S4R325 110 aa13.39□□□□□ -0.27
GCN1-207ENST00000550471 HSPG2P98160 4391 aa13.39□□□□□ -0.27
GCN1-207ENST00000550471 GRIFINA4D1Z8 144 aa13.38□□□□□ -0.27
GCN1-207ENST00000550471 IGHV3-30P01768 117 aa13.38□□□□□ -0.27
GCN1-207ENST00000550471 IGHV3-33P01772 117 aa13.38□□□□□ -0.27
GCN1-207ENST00000550471 IGHV3-30-3P0DP02 117 aa13.38□□□□□ -0.27
GCN1-207ENST00000550471 IGHV3-30-5P0DP03 117 aa13.38□□□□□ -0.27
GCN1-207ENST00000550471 Q6ZSN1 163 aa13.38□□□□□ -0.27
GCN1-207ENST00000550471 BAGE2Q86Y30 109 aa13.38□□□□□ -0.27
GCN1-207ENST00000550471 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.38□□□□□ -0.27
GCN1-207ENST00000550471 RMI2Q96E14 147 aa13.38□□□□□ -0.27
GCN1-207ENST00000550471 MANBALQ9NQG1 85 aa13.38□□□□□ -0.27
GCN1-207ENST00000550471 M0R381 172 aa13.37□□□□□ -0.27
GCN1-207ENST00000550471 RPL36AP83881 106 aaKnown RBP13.37□□□□□ -0.27
GCN1-207ENST00000550471 ELOBQ15370 118 aa13.37□□□□□ -0.27
GCN1-207ENST00000550471 FAM74A4Q5TZK3 123 aa13.37□□□□□ -0.27
GCN1-207ENST00000550471 RPL36ALQ969Q0 106 aaKnown RBP13.37□□□□□ -0.27
GCN1-207ENST00000550471 SAMD10Q9BYL1 202 aa13.37□□□□□ -0.27
GCN1-207ENST00000550471 KRTAP4-5Q9BYR2 181 aa13.37□□□□□ -0.27
GCN1-207ENST00000550471 LRCOL1A6NCL2 159 aa13.36□□□□□ -0.27
GCN1-207ENST00000550471 KCNIP4Q6PIL6 250 aa13.36□□□□□ -0.27
GCN1-207ENST00000550471 MLST8Q9BVC4 326 aa13.36□□□□□ -0.27
GCN1-207ENST00000550471 JPT2Q9H910 190 aa13.36□□□□□ -0.27
GCN1-207ENST00000550471 Q9HAA7 133 aa13.36□□□□□ -0.27
GCN1-207ENST00000550471 IGLV5-52A0A0A0MRZ9 124 aa13.35□□□□□ -0.27
GCN1-207ENST00000550471 TRAV1-1A0A0B4J248 108 aa13.35□□□□□ -0.27
GCN1-207ENST00000550471 RAB4BP61018 213 aa13.35□□□□□ -0.27
GCN1-207ENST00000550471 TMUB2Q71RG4 321 aa13.35□□□□□ -0.27
GCN1-207ENST00000550471 C14orf178Q8N769 122 aaPredicted RBP13.35□□□□□ -0.27
GCN1-207ENST00000550471 DNAH5Q8TE73 4624 aa13.35□□□□□ -0.27
GCN1-207ENST00000550471 TMSB15BA0A087X1C1 80 aa13.34□□□□□ -0.27
GCN1-207ENST00000550471 EPM2AB3EWF7 344 aa13.34□□□□□ -0.27
GCN1-207ENST00000550471 Q8N814 137 aa13.34□□□□□ -0.27
GCN1-207ENST00000550471 TMEM70Q9BUB7 260 aa13.34□□□□□ -0.27
GCN1-207ENST00000550471 TRBV7-3A0A075B6L6 115 aa13.33□□□□□ -0.28
GCN1-207ENST00000550471 A0A087WWL8 130 aa13.33□□□□□ -0.28
GCN1-207ENST00000550471 SCO2A0A1W2PP80 73 aa13.33□□□□□ -0.28
GCN1-207ENST00000550471 C1QBP02746 253 aa13.33□□□□□ -0.28
GCN1-207ENST00000550471 OR5AL1P0C617 328 aa13.33□□□□□ -0.28
GCN1-207ENST00000550471 PKIAP61925 76 aa13.33□□□□□ -0.28
GCN1-207ENST00000550471 OR10G8Q8NGN5 311 aa13.33□□□□□ -0.28
GCN1-207ENST00000550471 SMIM12Q96EX1 92 aa13.33□□□□□ -0.28
GCN1-207ENST00000550471 SSBP4Q9BWG4 385 aaPredicted RBP13.33□□□□□ -0.28
GCN1-207ENST00000550471 SNAI2O43623 268 aa13.32□□□□□ -0.28
GCN1-207ENST00000550471 TMEM97Q5BJF2 176 aa13.31□□□□□ -0.28
GCN1-207ENST00000550471 FRZBQ92765 325 aa13.31□□□□□ -0.28
GCN1-207ENST00000550471 C11orf52Q96A22 123 aa13.31□□□□□ -0.28
GCN1-207ENST00000550471 BIN3Q9NQY0 253 aa13.31□□□□□ -0.28
GCN1-207ENST00000550471 A0A087WX48 190 aa13.3□□□□□ -0.28
GCN1-207ENST00000550471 A0A1B0GV50 99 aa13.3□□□□□ -0.28
GCN1-207ENST00000550471 IFNA1P01562 189 aa13.3□□□□□ -0.28
GCN1-207ENST00000550471 XGP55808 180 aa13.3□□□□□ -0.28
GCN1-207ENST00000550471 KRTAP10-1P60331 282 aa13.3□□□□□ -0.28
GCN1-207ENST00000550471 RPS20P60866 119 aaKnown RBP13.3□□□□□ -0.28
GCN1-207ENST00000550471 UBE2D3P61077 147 aa13.3□□□□□ -0.28
GCN1-207ENST00000550471 UBE2D2P62837 147 aa13.3□□□□□ -0.28
GCN1-207ENST00000550471 SPANXN1Q5VSR9 72 aa13.3□□□□□ -0.28
GCN1-207ENST00000550471 NIT1Q86X76 327 aa13.3□□□□□ -0.28
GCN1-207ENST00000550471 SMIM17P0DL12 118 aa13.29□□□□□ -0.28
GCN1-207ENST00000550471 TAGLN2P37802 199 aaKnown RBP13.29□□□□□ -0.28
GCN1-207ENST00000550471 RPL35P42766 123 aaKnown RBP13.29□□□□□ -0.28
GCN1-207ENST00000550471 DAZAP1Q96EP5 407 aaKnown RBP13.29□□□□□ -0.28
GCN1-207ENST00000550471 GNG13Q9P2W3 67 aa13.29□□□□□ -0.28
GCN1-207ENST00000550471 APOBP04114 4563 aaKnown RBP13.29□□□□□ -0.28
GCN1-207ENST00000550471 XKRY2A2RUG3 117 aa13.28□□□□□ -0.28
GCN1-207ENST00000550471 PDE6DO43924 150 aa13.28□□□□□ -0.28
GCN1-207ENST00000550471 Q0VG73 95 aa13.28□□□□□ -0.28
GCN1-207ENST00000550471 ZNF56Q15929 161 aa13.28□□□□□ -0.28
GCN1-207ENST00000550471 TCTE3Q8IZS6 198 aa13.28□□□□□ -0.28
GCN1-207ENST00000550471 ABCA13Q86UQ4 5058 aa13.27□□□□□ -0.28
GCN1-207ENST00000550471 SULT1A2P50226 295 aa13.27□□□□□ -0.29
GCN1-207ENST00000550471 PRR27Q6MZM9 219 aa13.27□□□□□ -0.29
GCN1-207ENST00000550471 DAZ4Q86SG3 579 aaKnown RBP13.27□□□□□ -0.29
GCN1-207ENST00000550471 OR10AG1Q8NH19 301 aa13.27□□□□□ -0.29
GCN1-207ENST00000550471 AP1S3Q96PC3 154 aa13.27□□□□□ -0.29
GCN1-207ENST00000550471 DAZ3Q9NR90 486 aaKnown RBP13.27□□□□□ -0.29
GCN1-207ENST00000550471 Q8N976 141 aa13.26□□□□□ -0.29
GCN1-207ENST00000550471 Q9UF83 564 aa13.26□□□□□ -0.29
GCN1-207ENST00000550471 RBFOX3A6NFN3 312 aa13.25□□□□□ -0.29
GCN1-207ENST00000550471 FUSP35637 526 aaKnown RBP eCLIP13.25□□□□□ -0.29
GCN1-207ENST00000550471 CCL20P78556 96 aa13.25□□□□□ -0.29
GCN1-207ENST00000550471 RPL19P84098 196 aaKnown RBP13.25□□□□□ -0.29
GCN1-207ENST00000550471 SLC51BQ86UW2 128 aa13.25□□□□□ -0.29
GCN1-207ENST00000550471 TRBV6-8A0A0A6YYG3 113 aa13.24□□□□□ -0.29
GCN1-207ENST00000550471 F5H697 171 aa13.24□□□□□ -0.29
GCN1-207ENST00000550471 FAM229AH3BQW9 127 aa13.24□□□□□ -0.29
GCN1-207ENST00000550471 H7C1H1 209 aa13.24□□□□□ -0.29
GCN1-207ENST00000550471 CACNG7P62955 275 aa13.24□□□□□ -0.29
GCN1-207ENST00000550471 MEF2BQ02080 365 aaPredicted RBP13.24□□□□□ -0.29
GCN1-207ENST00000550471 F2Z2F3 143 aa13.23□□□□□ -0.29
GCN1-207ENST00000550471 GNG4P50150 75 aa13.23□□□□□ -0.29
GCN1-207ENST00000550471 CENPWQ5EE01 88 aa13.23□□□□□ -0.29
GCN1-207ENST00000550471 KLK12Q9UKR0 248 aa13.23□□□□□ -0.29
GCN1-207ENST00000550471 C14orf177Q52M58 125 aa13.22□□□□□ -0.29
GCN1-207ENST00000550471 ATRAIDQ6UW56 229 aa13.22□□□□□ -0.29
GCN1-207ENST00000550471 NEXN-AS1Q8NBZ9 246 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms