RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 F5H697 171 aa10.66□□□□□ -0.7
SRP54-202ENST00000546080 M0QXV9 152 aa10.66□□□□□ -0.7
SRP54-202ENST00000546080 GATA3P23771 443 aa10.66□□□□□ -0.7
SRP54-202ENST00000546080 PIEZO2Q9H5I5 2752 aa10.66□□□□□ -0.7
SRP54-202ENST00000546080 LINC00527Q9UJ94 153 aa10.66□□□□□ -0.7
SRP54-202ENST00000546080 ATMQ13315 3056 aa10.66□□□□□ -0.7
SRP54-202ENST00000546080 SDHAF1A6NFY7 115 aa10.66□□□□□ -0.7
SRP54-202ENST00000546080 TRPT1Q86TN4 253 aaKnown RBP10.66□□□□□ -0.7
SRP54-202ENST00000546080 JPT2Q9H910 190 aa10.66□□□□□ -0.7
SRP54-202ENST00000546080 DCHS2Q6V1P9 2916 aa10.66□□□□□ -0.7
SRP54-202ENST00000546080 CEP295Q9C0D2 2601 aa10.65□□□□□ -0.7
SRP54-202ENST00000546080 IGKV3-7A0A075B6H7 116 aa10.65□□□□□ -0.7
SRP54-202ENST00000546080 A0A087WWL8 130 aa10.65□□□□□ -0.7
SRP54-202ENST00000546080 H7C2G1 150 aa10.65□□□□□ -0.7
SRP54-202ENST00000546080 NDUFA4O00483 81 aa10.65□□□□□ -0.7
SRP54-202ENST00000546080 IGHV3-33P01772 117 aa10.65□□□□□ -0.7
SRP54-202ENST00000546080 CRIP2P52943 208 aaPredicted RBP10.65□□□□□ -0.7
SRP54-202ENST00000546080 LRBAP50851 2863 aa10.65□□□□□ -0.7
SRP54-202ENST00000546080 MAP1BP46821 2468 aaKnown RBP10.65□□□□□ -0.7
SRP54-202ENST00000546080 WNK2Q9Y3S1 2297 aa10.65□□□□□ -0.7
SRP54-202ENST00000546080 TRAV2A0A0B4J234 112 aa10.65□□□□□ -0.71
SRP54-202ENST00000546080 TRBV7-9A0A0J9YWB2 115 aa10.65□□□□□ -0.71
SRP54-202ENST00000546080 TRBV12-3P01733 135 aa10.65□□□□□ -0.71
SRP54-202ENST00000546080 FAM159AQ6UWV7 190 aa10.65□□□□□ -0.71
SRP54-202ENST00000546080 TMEM263Q8WUH6 116 aaKnown RBP10.65□□□□□ -0.71
SRP54-202ENST00000546080 CITED1Q99966 193 aa10.65□□□□□ -0.71
SRP54-202ENST00000546080 A0A0B4J2C4 111 aa10.64□□□□□ -0.71
SRP54-202ENST00000546080 LEPROTO15243 131 aa10.64□□□□□ -0.71
SRP54-202ENST00000546080 TMEM219Q86XT9 240 aa10.64□□□□□ -0.71
SRP54-202ENST00000546080 AKAP13Q12802 2813 aa10.64□□□□□ -0.71
SRP54-202ENST00000546080 P0DMU3 169 aa10.63□□□□□ -0.71
SRP54-202ENST00000546080 FAM231AP0DMU4 169 aa10.63□□□□□ -0.71
SRP54-202ENST00000546080 FAM231CP0DMU5 169 aa10.63□□□□□ -0.71
SRP54-202ENST00000546080 GAGE5Q13069 117 aa10.63□□□□□ -0.71
SRP54-202ENST00000546080 GAGE6Q13070 117 aa10.63□□□□□ -0.71
SRP54-202ENST00000546080 Q1RN00 199 aa10.63□□□□□ -0.71
SRP54-202ENST00000546080 TRBV27A0A0K0K1C4 114 aa10.63□□□□□ -0.71
SRP54-202ENST00000546080 EIF4EBP3O60516 100 aaPredicted RBP10.63□□□□□ -0.71
SRP54-202ENST00000546080 SNCGO76070 127 aa10.63□□□□□ -0.71
SRP54-202ENST00000546080 SS18L2Q9UHA2 77 aa10.63□□□□□ -0.71
SRP54-202ENST00000546080 ZNF256Q9Y2P7 627 aaPredicted RBP10.63□□□□□ -0.71
SRP54-202ENST00000546080 TMEM223A0PJW6 202 aa10.62□□□□□ -0.71
SRP54-202ENST00000546080 CCL21O00585 134 aa10.62□□□□□ -0.71
SRP54-202ENST00000546080 NPFFO15130 113 aa10.62□□□□□ -0.71
SRP54-202ENST00000546080 SRD5A1P18405 259 aa10.62□□□□□ -0.71
SRP54-202ENST00000546080 ATXN8Q156A1 80 aa10.62□□□□□ -0.71
SRP54-202ENST00000546080 MUSTN1Q8IVN3 82 aa10.62□□□□□ -0.71
SRP54-202ENST00000546080 NTN5Q8WTR8 489 aaPredicted RBP10.62□□□□□ -0.71
SRP54-202ENST00000546080 MOB4Q9Y3A3 225 aa10.62□□□□□ -0.71
SRP54-202ENST00000546080 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.62□□□□□ -0.71
SRP54-202ENST00000546080 LGALS9O00182 355 aa10.62□□□□□ -0.71
SRP54-202ENST00000546080 IGHV1-69P01742 117 aa10.62□□□□□ -0.71
SRP54-202ENST00000546080 GAGE2BQ13066 116 aa10.62□□□□□ -0.71
SRP54-202ENST00000546080 GAGE2EQ4V326 116 aa10.62□□□□□ -0.71
SRP54-202ENST00000546080 C19orf54Q5BKX5 351 aa10.62□□□□□ -0.71
SRP54-202ENST00000546080 FAM74A4Q5TZK3 123 aa10.62□□□□□ -0.71
SRP54-202ENST00000546080 GAGE2DQ9UEU5 116 aa10.62□□□□□ -0.71
SRP54-202ENST00000546080 IGHV3-64A0A075B6Q5 118 aa10.61□□□□□ -0.71
SRP54-202ENST00000546080 TRBV6-5A0A0K0K1A5 114 aa10.61□□□□□ -0.71
SRP54-202ENST00000546080 RHODO00212 210 aa10.61□□□□□ -0.71
SRP54-202ENST00000546080 KLLNB2CW77 178 aa10.6□□□□□ -0.71
SRP54-202ENST00000546080 CDSNQ15517 529 aa10.6□□□□□ -0.71
SRP54-202ENST00000546080 LINC01620Q4KN68 170 aa10.6□□□□□ -0.71
SRP54-202ENST00000546080 OPRPNQ99935 248 aaPredicted RBP10.6□□□□□ -0.71
SRP54-202ENST00000546080 RHOHQ15669 191 aa10.6□□□□□ -0.71
SRP54-202ENST00000546080 ZNF56Q15929 161 aa10.6□□□□□ -0.71
SRP54-202ENST00000546080 NSUN5P1Q3KNT7 163 aa10.6□□□□□ -0.71
SRP54-202ENST00000546080 Q8N1Y9 231 aa10.6□□□□□ -0.71
SRP54-202ENST00000546080 ANKRD11Q6UB99 2663 aaPredicted RBP10.6□□□□□ -0.71
SRP54-202ENST00000546080 MUC4Q99102 2169 aa10.6□□□□□ -0.71
SRP54-202ENST00000546080 IGHV4-39P01824 125 aa10.59□□□□□ -0.71
SRP54-202ENST00000546080 ZNF22P17026 224 aaPredicted RBP10.59□□□□□ -0.71
SRP54-202ENST00000546080 RHPN1-AS1Q9BWJ2 59 aa10.59□□□□□ -0.71
SRP54-202ENST00000546080 IGHV3-11P01762 117 aa10.59□□□□□ -0.71
SRP54-202ENST00000546080 TRAV4A0A0B4J268 109 aa10.58□□□□□ -0.72
SRP54-202ENST00000546080 TRAV12-3A0A0B4J271 114 aa10.58□□□□□ -0.72
SRP54-202ENST00000546080 B5MCH6 92 aa10.58□□□□□ -0.72
SRP54-202ENST00000546080 ELANEP08246 267 aa10.58□□□□□ -0.72
SRP54-202ENST00000546080 NHLRC4P0CG21 123 aaPredicted RBP10.58□□□□□ -0.72
SRP54-202ENST00000546080 NDUFV3P56181 108 aaKnown RBP10.58□□□□□ -0.72
SRP54-202ENST00000546080 TRAV8-4A0A0B4J246 113 aa10.58□□□□□ -0.72
SRP54-202ENST00000546080 M0R2P5 195 aa10.58□□□□□ -0.72
SRP54-202ENST00000546080 BEX4Q9NWD9 120 aaPredicted RBP10.58□□□□□ -0.72
SRP54-202ENST00000546080 ACACAQ13085 2346 aa10.57□□□□□ -0.72
SRP54-202ENST00000546080 A0A0J9YX75 114 aa10.57□□□□□ -0.72
SRP54-202ENST00000546080 TRBV10-2A0A0K0K1G8 114 aa10.57□□□□□ -0.72
SRP54-202ENST00000546080 CRLF1O75462 422 aa10.57□□□□□ -0.72
SRP54-202ENST00000546080 TTC32Q5I0X7 151 aa10.57□□□□□ -0.72
SRP54-202ENST00000546080 MDFICQ9P1T7 246 aa10.57□□□□□ -0.72
SRP54-202ENST00000546080 ANKHD1Q8IWZ3 2542 aaKnown RBP10.56□□□□□ -0.72
SRP54-202ENST00000546080 RPL13AP40429 203 aaKnown RBP10.56□□□□□ -0.72
SRP54-202ENST00000546080 USMG5Q96IX5 58 aa10.56□□□□□ -0.72
SRP54-202ENST00000546080 ABCA4P78363 2273 aa10.56□□□□□ -0.72
SRP54-202ENST00000546080 A0A0J9YXV3 536 aa10.56□□□□□ -0.72
SRP54-202ENST00000546080 A0A0J9YXY3 114 aa10.56□□□□□ -0.72
SRP54-202ENST00000546080 TRBV30A0A0K0K1B3 111 aa10.56□□□□□ -0.72
SRP54-202ENST00000546080 TEX49A0A1B0GTD5 131 aa10.56□□□□□ -0.72
SRP54-202ENST00000546080 H3BMM0 161 aa10.56□□□□□ -0.72
SRP54-202ENST00000546080 M0QY20 66 aa10.56□□□□□ -0.72
SRP54-202ENST00000546080 TRIAP1O43715 76 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms