RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 C9orf85Q96MD7 179 aa11.37□□□□□ -0.59
CNN3-207ENST00000545882 IGSF10Q6WRI0 2623 aa11.36□□□□□ -0.59
CNN3-207ENST00000545882 IGHV3-16A0A0C4DH30 117 aa11.36□□□□□ -0.59
CNN3-207ENST00000545882 LGALS9O00182 355 aa11.36□□□□□ -0.59
CNN3-207ENST00000545882 HOXA3O43365 443 aaPredicted RBP11.36□□□□□ -0.59
CNN3-207ENST00000545882 ZNF580Q9UK33 172 aa11.36□□□□□ -0.59
CNN3-207ENST00000545882 SDHAF1A6NFY7 115 aa11.35□□□□□ -0.59
CNN3-207ENST00000545882 VCYO14598 125 aa11.35□□□□□ -0.59
CNN3-207ENST00000545882 PMVKQ15126 192 aa11.35□□□□□ -0.59
CNN3-207ENST00000545882 MDFICQ9P1T7 246 aa11.35□□□□□ -0.59
CNN3-207ENST00000545882 TRBV6-5A0A0K0K1A5 114 aa11.35□□□□□ -0.59
CNN3-207ENST00000545882 F5H697 171 aa11.35□□□□□ -0.59
CNN3-207ENST00000545882 UBE2D1P51668 147 aa11.35□□□□□ -0.59
CNN3-207ENST00000545882 TRBV27A0A0K0K1C4 114 aa11.34□□□□□ -0.59
CNN3-207ENST00000545882 ZNF688P0C7X2 276 aa11.34□□□□□ -0.59
CNN3-207ENST00000545882 SH2D6Q7Z4S9 175 aa11.34□□□□□ -0.59
CNN3-207ENST00000545882 TMEM141Q96I45 108 aa11.34□□□□□ -0.59
CNN3-207ENST00000545882 TIMM17AQ99595 171 aa11.34□□□□□ -0.59
CNN3-207ENST00000545882 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.34□□□□□ -0.594e-6■■■□□ 14.9
CNN3-207ENST00000545882 TRAV12-2A0A075B6T6 113 aa11.33□□□□□ -0.6
CNN3-207ENST00000545882 A0A0J9YX75 114 aa11.33□□□□□ -0.6
CNN3-207ENST00000545882 TSPEAR-AS2P59090 65 aa11.33□□□□□ -0.6
CNN3-207ENST00000545882 SCGB2A2Q13296 93 aa11.33□□□□□ -0.6
CNN3-207ENST00000545882 MTURNQ8N3F0 131 aa11.33□□□□□ -0.6
CNN3-207ENST00000545882 ZNRF2Q8NHG8 242 aa11.33□□□□□ -0.6
CNN3-207ENST00000545882 ODF3Q96PU9 254 aa11.33□□□□□ -0.6
CNN3-207ENST00000545882 PGPEP1Q9NXJ5 209 aa11.33□□□□□ -0.6
CNN3-207ENST00000545882 A0A0J9YY99 117 aa11.33□□□□□ -0.6
CNN3-207ENST00000545882 LINC01549A6NIU2 74 aa11.33□□□□□ -0.6
CNN3-207ENST00000545882 IGKV3-20P01619 116 aa11.33□□□□□ -0.6
CNN3-207ENST00000545882 ETDBQ3ZM63 59 aa11.33□□□□□ -0.6
CNN3-207ENST00000545882 GAGE13Q4V321 117 aa11.33□□□□□ -0.6
CNN3-207ENST00000545882 SAMD13Q5VXD3 122 aa11.33□□□□□ -0.6
CNN3-207ENST00000545882 SCGB1D4Q6XE38 83 aa11.33□□□□□ -0.6
CNN3-207ENST00000545882 KIR2DL4Q99706 377 aa11.33□□□□□ -0.6
CNN3-207ENST00000545882 USP9XQ93008 2570 aaPredicted RBP11.32□□□□□ -0.6
CNN3-207ENST00000545882 B4DSR2 109 aa11.32□□□□□ -0.6
CNN3-207ENST00000545882 K7EQG2 157 aa11.32□□□□□ -0.6
CNN3-207ENST00000545882 M0QY20 66 aa11.32□□□□□ -0.6
CNN3-207ENST00000545882 IGHV4-59P01825 116 aa11.32□□□□□ -0.6
CNN3-207ENST00000545882 ZNF876PQ49A33 203 aa11.32□□□□□ -0.6
CNN3-207ENST00000545882 PAPPA-AS1Q5QFB9 102 aa11.32□□□□□ -0.6
CNN3-207ENST00000545882 FAM74A4Q5TZK3 123 aa11.32□□□□□ -0.6
CNN3-207ENST00000545882 CSPG4Q6UVK1 2322 aa11.32□□□□□ -0.6
CNN3-207ENST00000545882 FLNCQ14315 2725 aa11.32□□□□□ -0.6
CNN3-207ENST00000545882 TMEM238C9JI98 176 aa11.31□□□□□ -0.6
CNN3-207ENST00000545882 Q8N1Y9 231 aa11.31□□□□□ -0.6
CNN3-207ENST00000545882 AMELXQ99217 191 aa11.31□□□□□ -0.6
CNN3-207ENST00000545882 SPAG8Q99932 426 aaPredicted RBP11.31□□□□□ -0.6
CNN3-207ENST00000545882 SRSF9Q13242 221 aaKnown RBP eCLIP11.31□□□□□ -0.6
CNN3-207ENST00000545882 DEFB112Q30KQ8 113 aa11.31□□□□□ -0.6
CNN3-207ENST00000545882 ZNF256Q9Y2P7 627 aaPredicted RBP11.31□□□□□ -0.6
CNN3-207ENST00000545882 TSPAN13O95857 204 aa11.3□□□□□ -0.6
CNN3-207ENST00000545882 P0DMU3 169 aa11.3□□□□□ -0.6
CNN3-207ENST00000545882 FAM231AP0DMU4 169 aa11.3□□□□□ -0.6
CNN3-207ENST00000545882 FAM231CP0DMU5 169 aa11.3□□□□□ -0.6
CNN3-207ENST00000545882 GATA3P23771 443 aa11.3□□□□□ -0.6
CNN3-207ENST00000545882 OPRPNQ99935 248 aaPredicted RBP11.3□□□□□ -0.6
CNN3-207ENST00000545882 SPG11Q96JI7 2443 aa11.3□□□□□ -0.6
CNN3-207ENST00000545882 A0A096LNT2 108 aa11.29□□□□□ -0.6
CNN3-207ENST00000545882 SMCPP49901 116 aaPredicted RBP11.29□□□□□ -0.6
CNN3-207ENST00000545882 DSCR9P59020 149 aa11.29□□□□□ -0.6
CNN3-207ENST00000545882 HERVK_113P61574 105 aa11.29□□□□□ -0.6
CNN3-207ENST00000545882 MRPL16Q9NX20 251 aaKnown RBP11.29□□□□□ -0.6
CNN3-207ENST00000545882 TSSC4Q9Y5U2 329 aaPredicted RBP11.29□□□□□ -0.6
CNN3-207ENST00000545882 CELSR2Q9HCU4 2923 aa11.29□□□□□ -0.6
CNN3-207ENST00000545882 SORL1Q92673 2214 aa11.29□□□□□ -0.6
CNN3-207ENST00000545882 IGHV1OR15-1A0A075B7D0 117 aa11.29□□□□□ -0.6
CNN3-207ENST00000545882 ZNF56Q15929 161 aa11.29□□□□□ -0.6
CNN3-207ENST00000545882 SPINK13Q1W4C9 94 aa11.29□□□□□ -0.6
CNN3-207ENST00000545882 NRGNQ92686 78 aa11.29□□□□□ -0.6
CNN3-207ENST00000545882 DOPEY2Q9Y3R5 2298 aa11.28□□□□□ -0.6
CNN3-207ENST00000545882 TMEM238LA0A1B0GVL6 79 aa11.28□□□□□ -0.6
CNN3-207ENST00000545882 A6NJY4 79 aa11.28□□□□□ -0.6
CNN3-207ENST00000545882 INSL3P51460 131 aa11.28□□□□□ -0.6
CNN3-207ENST00000545882 NSUN5P1Q3KNT7 163 aa11.28□□□□□ -0.6
CNN3-207ENST00000545882 TMEM170BQ5T4T1 132 aa11.28□□□□□ -0.6
CNN3-207ENST00000545882 CSMD2Q7Z408 3487 aa11.28□□□□□ -0.6
CNN3-207ENST00000545882 TMEM89A2RUT3 159 aa11.27□□□□□ -0.6
CNN3-207ENST00000545882 IGHV3-30P01768 117 aa11.27□□□□□ -0.6
CNN3-207ENST00000545882 IGHV3-30-5P0DP03 117 aa11.27□□□□□ -0.6
CNN3-207ENST00000545882 UBE2D3P61077 147 aa11.27□□□□□ -0.6
CNN3-207ENST00000545882 UBE2D2P62837 147 aa11.27□□□□□ -0.6
CNN3-207ENST00000545882 NFE4Q86UQ8 179 aa11.27□□□□□ -0.6
CNN3-207ENST00000545882 NDUFA11Q86Y39 141 aa11.27□□□□□ -0.6
CNN3-207ENST00000545882 SLC25A29Q8N8R3 303 aa11.27□□□□□ -0.6
CNN3-207ENST00000545882 SYT8Q8NBV8 401 aa11.27□□□□□ -0.6
CNN3-207ENST00000545882 GAGE12HA6NDE8 117 aa11.27□□□□□ -0.61
CNN3-207ENST00000545882 APOMO95445 188 aa11.27□□□□□ -0.61
CNN3-207ENST00000545882 SNRPD3P62318 126 aaKnown RBP11.27□□□□□ -0.61
CNN3-207ENST00000545882 CFAP126Q5VTH2 177 aa11.27□□□□□ -0.61
CNN3-207ENST00000545882 MAP1AP78559 2803 aaPredicted RBP11.26□□□□□ -0.61
CNN3-207ENST00000545882 SYNJ2BPP57105 145 aa11.26□□□□□ -0.61
CNN3-207ENST00000545882 RHOHQ15669 191 aa11.26□□□□□ -0.61
CNN3-207ENST00000545882 SFTA2Q6UW10 78 aa11.26□□□□□ -0.61
CNN3-207ENST00000545882 TRPT1Q86TN4 253 aaKnown RBP11.26□□□□□ -0.61
CNN3-207ENST00000545882 NACAE9PAV3 2078 aa11.26□□□□□ -0.61
CNN3-207ENST00000545882 RBMY1A1P0DJD3 496 aaKnown RBP11.25□□□□□ -0.61
CNN3-207ENST00000545882 RBMY1CP0DJD4 496 aa11.25□□□□□ -0.61
CNN3-207ENST00000545882 AZU1P20160 251 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms