RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 OR4C5Q8NGB2 326 aa11.41□□□□□ -0.58
PRPF40A-212ENST00000545856 FAM210BQ96KR6 192 aa11.41□□□□□ -0.58
PRPF40A-212ENST00000545856 EDA2RQ9HAV5 297 aa11.41□□□□□ -0.58
PRPF40A-212ENST00000545856 U3KQK5 164 aa11.41□□□□□ -0.58
PRPF40A-212ENST00000545856 A0A0J9YWU9 116 aa11.4□□□□□ -0.59
PRPF40A-212ENST00000545856 ATP5G1P05496 136 aa11.4□□□□□ -0.59
PRPF40A-212ENST00000545856 GAGE12BA1L429 117 aa11.39□□□□□ -0.59
PRPF40A-212ENST00000545856 H7C1H1 209 aa11.39□□□□□ -0.59
PRPF40A-212ENST00000545856 GAGE7O76087 117 aa11.39□□□□□ -0.59
PRPF40A-212ENST00000545856 GAGE12FP0CL80 117 aa11.39□□□□□ -0.59
PRPF40A-212ENST00000545856 GAGE12GP0CL81 117 aa11.39□□□□□ -0.59
PRPF40A-212ENST00000545856 GAGE12IP0CL82 117 aa11.39□□□□□ -0.59
PRPF40A-212ENST00000545856 CAMPP49913 170 aa11.39□□□□□ -0.59
PRPF40A-212ENST00000545856 C11orf45Q8TAV5 145 aa11.39□□□□□ -0.59
PRPF40A-212ENST00000545856 KIF25-AS1Q9Y6Z4 181 aa11.39□□□□□ -0.59
PRPF40A-212ENST00000545856 PPP1R17O96001 155 aa11.38□□□□□ -0.59
PRPF40A-212ENST00000545856 PPBPP02775 128 aa11.38□□□□□ -0.59
PRPF40A-212ENST00000545856 CRYGDP07320 174 aa11.38□□□□□ -0.59
PRPF40A-212ENST00000545856 RAB4BP61018 213 aa11.38□□□□□ -0.59
PRPF40A-212ENST00000545856 FAM104BQ5XKR9 115 aa11.38□□□□□ -0.59
PRPF40A-212ENST00000545856 UFSP1Q6NVU6 142 aa11.38□□□□□ -0.59
PRPF40A-212ENST00000545856 MSRB1Q9NZV6 116 aa11.38□□□□□ -0.59
PRPF40A-212ENST00000545856 TGIF2-C20orf24A0A0A6YYL0 155 aa11.37□□□□□ -0.59
PRPF40A-212ENST00000545856 MUC21A0A0G2JKD1 596 aa11.37□□□□□ -0.59
PRPF40A-212ENST00000545856 MUC21A0A140T8X8 626 aa11.37□□□□□ -0.59
PRPF40A-212ENST00000545856 COLCA2A8K830 154 aa11.37□□□□□ -0.59
PRPF40A-212ENST00000545856 DEFB4AO15263 64 aa11.37□□□□□ -0.59
PRPF40A-212ENST00000545856 DEFB130BP0DP73 79 aa11.37□□□□□ -0.59
PRPF40A-212ENST00000545856 DEFB130AP0DP74 79 aa11.37□□□□□ -0.59
PRPF40A-212ENST00000545856 EVI2AP22794 236 aa11.37□□□□□ -0.59
PRPF40A-212ENST00000545856 C14orf178Q8N769 122 aaPredicted RBP11.37□□□□□ -0.59
PRPF40A-212ENST00000545856 MRAP2Q96G30 205 aa11.37□□□□□ -0.59
PRPF40A-212ENST00000545856 CELA1Q9UNI1 258 aa11.37□□□□□ -0.59
PRPF40A-212ENST00000545856 TMEM136Q6ZRR5 245 aa11.36□□□□□ -0.59
PRPF40A-212ENST00000545856 LAMTOR2Q9Y2Q5 125 aa11.36□□□□□ -0.59
PRPF40A-212ENST00000545856 TRBV10-1A0A0K0K1A3 114 aa11.35□□□□□ -0.59
PRPF40A-212ENST00000545856 TRBV6-4A0A1B0GX49 114 aa11.35□□□□□ -0.59
PRPF40A-212ENST00000545856 SCO1O75880 301 aa11.35□□□□□ -0.59
PRPF40A-212ENST00000545856 IGHV3-53P01767 116 aa11.35□□□□□ -0.59
PRPF40A-212ENST00000545856 LINC00315P59091 139 aa11.35□□□□□ -0.59
PRPF40A-212ENST00000545856 C12orf74Q32Q52 190 aa11.35□□□□□ -0.59
PRPF40A-212ENST00000545856 PHOX2AO14813 284 aa11.34□□□□□ -0.59
PRPF40A-212ENST00000545856 RAB5AP20339 215 aa11.34□□□□□ -0.59
PRPF40A-212ENST00000545856 FAM74A4Q5TZK3 123 aa11.34□□□□□ -0.59
PRPF40A-212ENST00000545856 TRGV4A0A0C4DH28 118 aa11.33□□□□□ -0.6
PRPF40A-212ENST00000545856 H3BNG1 76 aa11.33□□□□□ -0.6
PRPF40A-212ENST00000545856 GATA1P15976 413 aaPredicted RBP11.33□□□□□ -0.6
PRPF40A-212ENST00000545856 RAB4AP20338 218 aa11.33□□□□□ -0.6
PRPF40A-212ENST00000545856 ZNF56Q15929 161 aa11.33□□□□□ -0.6
PRPF40A-212ENST00000545856 ZNF479Q96JC4 524 aa11.33□□□□□ -0.6
PRPF40A-212ENST00000545856 PRO0255Q9UI72 69 aa11.33□□□□□ -0.6
PRPF40A-212ENST00000545856 A0A087WWL8 130 aa11.32□□□□□ -0.6
PRPF40A-212ENST00000545856 TRAV10A0A0B4J240 114 aa11.32□□□□□ -0.6
PRPF40A-212ENST00000545856 APCSP02743 223 aa11.32□□□□□ -0.6
PRPF40A-212ENST00000545856 SSTP61278 116 aa11.32□□□□□ -0.6
PRPF40A-212ENST00000545856 RHOHQ15669 191 aa11.32□□□□□ -0.6
PRPF40A-212ENST00000545856 AMN1Q8IY45 258 aa11.32□□□□□ -0.6
PRPF40A-212ENST00000545856 DNAJC30Q96LL9 226 aa11.32□□□□□ -0.6
PRPF40A-212ENST00000545856 SAMD10Q9BYL1 202 aa11.32□□□□□ -0.6
PRPF40A-212ENST00000545856 JPT2Q9H910 190 aa11.32□□□□□ -0.6
PRPF40A-212ENST00000545856 TRAPPC1Q9Y5R8 145 aa11.32□□□□□ -0.6
PRPF40A-212ENST00000545856 TGP01266 2768 aa11.32□□□□□ -0.6
PRPF40A-212ENST00000545856 FHL2Q14192 279 aa11.31□□□□□ -0.6
PRPF40A-212ENST00000545856 ORMDL3Q8N138 153 aa11.31□□□□□ -0.6
PRPF40A-212ENST00000545856 RNF185Q96GF1 192 aa11.31□□□□□ -0.6
PRPF40A-212ENST00000545856 MRPL18Q9H0U6 180 aaKnown RBP11.31□□□□□ -0.6
PRPF40A-212ENST00000545856 F5H697 171 aa11.3□□□□□ -0.6
PRPF40A-212ENST00000545856 K7EQD1 137 aa11.3□□□□□ -0.6
PRPF40A-212ENST00000545856 MGPP08493 103 aa11.3□□□□□ -0.6
PRPF40A-212ENST00000545856 MRPL51Q4U2R6 128 aaKnown RBP11.3□□□□□ -0.6
PRPF40A-212ENST00000545856 PRADC1Q9BSG0 188 aa11.3□□□□□ -0.6
PRPF40A-212ENST00000545856 CKS2P33552 79 aa11.29□□□□□ -0.6
PRPF40A-212ENST00000545856 RPS10P46783 165 aaKnown RBP11.29□□□□□ -0.6
PRPF40A-212ENST00000545856 SUMO4Q6EEV6 95 aa11.29□□□□□ -0.6
PRPF40A-212ENST00000545856 Q6ZTC4 211 aa11.29□□□□□ -0.6
PRPF40A-212ENST00000545856 HHLA3Q9XRX5 114 aa11.29□□□□□ -0.6
PRPF40A-212ENST00000545856 TRBV6-5A0A0K0K1A5 114 aa11.28□□□□□ -0.6
PRPF40A-212ENST00000545856 M0QY20 66 aa11.28□□□□□ -0.6
PRPF40A-212ENST00000545856 CRYBA4P53673 196 aa11.28□□□□□ -0.6
PRPF40A-212ENST00000545856 FABP9Q0Z7S8 132 aa11.28□□□□□ -0.6
PRPF40A-212ENST00000545856 SH2D6Q7Z4S9 175 aa11.28□□□□□ -0.6
PRPF40A-212ENST00000545856 NIT2Q9NQR4 276 aa11.28□□□□□ -0.6
PRPF40A-212ENST00000545856 NANOS2P60321 138 aaKnown RBP11.28□□□□□ -0.6
PRPF40A-212ENST00000545856 RPL32P62910 135 aaKnown RBP11.28□□□□□ -0.6
PRPF40A-212ENST00000545856 SLC25A29Q8N8R3 303 aa11.28□□□□□ -0.6
PRPF40A-212ENST00000545856 C20orf78Q9BR46 151 aa11.28□□□□□ -0.6
PRPF40A-212ENST00000545856 DNAH7Q8WXX0 4024 aa11.27□□□□□ -0.61
PRPF40A-212ENST00000545856 DEFB131BA0A096LNP1 70 aa11.27□□□□□ -0.61
PRPF40A-212ENST00000545856 F5H768 121 aa11.27□□□□□ -0.61
PRPF40A-212ENST00000545856 HOXA5P20719 270 aa11.27□□□□□ -0.61
PRPF40A-212ENST00000545856 RPL36AP83881 106 aaKnown RBP11.27□□□□□ -0.61
PRPF40A-212ENST00000545856 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.27□□□□□ -0.61
PRPF40A-212ENST00000545856 RPL36ALQ969Q0 106 aaKnown RBP11.27□□□□□ -0.61
PRPF40A-212ENST00000545856 TRAV26-1A0A087WT03 109 aa11.26□□□□□ -0.61
PRPF40A-212ENST00000545856 D6R8Y8 96 aa11.26□□□□□ -0.61
PRPF40A-212ENST00000545856 TCAPO15273 167 aa11.26□□□□□ -0.61
PRPF40A-212ENST00000545856 TCTAP57738 103 aa11.26□□□□□ -0.61
PRPF40A-212ENST00000545856 PRELID3AQ96N28 172 aa11.26□□□□□ -0.61
PRPF40A-212ENST00000545856 TRBV7-3A0A075B6L6 115 aa11.25□□□□□ -0.61
PRPF40A-212ENST00000545856 IGHV3-73A0A0B4J1V6 119 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms