RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 OR11H2Q8NH07 326 aa17.44■□□□□ 0.38
FOXA1-202ENST00000545425 ABCA2Q9BZC7 2435 aa17.44■□□□□ 0.38
FOXA1-202ENST00000545425 C2CD3Q4AC94 2353 aa17.44■□□□□ 0.38
FOXA1-202ENST00000545425 SAMD5Q5TGI4 173 aa17.43■□□□□ 0.38
FOXA1-202ENST00000545425 RNF223E7ERA6 249 aa17.42■□□□□ 0.38
FOXA1-202ENST00000545425 TCTAP57738 103 aa17.42■□□□□ 0.38
FOXA1-202ENST00000545425 LINC01356Q8N9X3 169 aa17.42■□□□□ 0.38
FOXA1-202ENST00000545425 CYSLTR1Q9Y271 337 aa17.42■□□□□ 0.38
FOXA1-202ENST00000545425 SPCS1Q9Y6A9 102 aa17.42■□□□□ 0.38
FOXA1-202ENST00000545425 GNRH2O43555 120 aa17.42■□□□□ 0.38
FOXA1-202ENST00000545425 SNRPD3P62318 126 aaKnown RBP17.42■□□□□ 0.38
FOXA1-202ENST00000545425 RNF152Q8N8N0 203 aa17.42■□□□□ 0.38
FOXA1-202ENST00000545425 TMEM141Q96I45 108 aa17.42■□□□□ 0.38
FOXA1-202ENST00000545425 TRBV6-5A0A0K0K1A5 114 aa17.41■□□□□ 0.38
FOXA1-202ENST00000545425 E9PLD3 99 aa17.41■□□□□ 0.38
FOXA1-202ENST00000545425 VCYO14598 125 aa17.41■□□□□ 0.38
FOXA1-202ENST00000545425 LY6G6DO95868 133 aa17.41■□□□□ 0.38
FOXA1-202ENST00000545425 FXYD2P54710 66 aa17.41■□□□□ 0.38
FOXA1-202ENST00000545425 SYT8Q8NBV8 401 aa17.41■□□□□ 0.38
FOXA1-202ENST00000545425 CSTL1Q9H114 145 aa17.41■□□□□ 0.38
FOXA1-202ENST00000545425 F6UB75 175 aa17.4■□□□□ 0.38
FOXA1-202ENST00000545425 LGALS9O00182 355 aa17.4■□□□□ 0.38
FOXA1-202ENST00000545425 LINC00315P59091 139 aa17.4■□□□□ 0.38
FOXA1-202ENST00000545425 BAALCQ8WXS3 180 aa17.4■□□□□ 0.38
FOXA1-202ENST00000545425 RPL39LQ96EH5 51 aaKnown RBP17.4■□□□□ 0.38
FOXA1-202ENST00000545425 MYMXA0A1B0GTQ4 84 aa17.4■□□□□ 0.38
FOXA1-202ENST00000545425 DUSP14O95147 198 aaKnown RBP17.4■□□□□ 0.38
FOXA1-202ENST00000545425 PHLDA1Q8WV24 401 aaPredicted RBP17.4■□□□□ 0.38
FOXA1-202ENST00000545425 NF1P21359 2839 aa17.4■□□□□ 0.38
FOXA1-202ENST00000545425 PCP4P48539 62 aa17.39■□□□□ 0.37
FOXA1-202ENST00000545425 POLR2KP53803 58 aaKnown RBP17.38■□□□□ 0.37
FOXA1-202ENST00000545425 Q6ZS46 218 aa17.38■□□□□ 0.37
FOXA1-202ENST00000545425 RAB37Q96AX2 223 aa17.38■□□□□ 0.37
FOXA1-202ENST00000545425 C9orf85Q96MD7 179 aa17.38■□□□□ 0.37
FOXA1-202ENST00000545425 KIR2DL4Q99706 377 aa17.38■□□□□ 0.37
FOXA1-202ENST00000545425 ZFHX3Q15911 3703 aa17.38■□□□□ 0.37
FOXA1-202ENST00000545425 ELANEP08246 267 aa17.37■□□□□ 0.37
FOXA1-202ENST00000545425 TIMM17AQ99595 171 aa17.37■□□□□ 0.37
FOXA1-202ENST00000545425 NIPBLQ6KC79 2804 aaeCLIP17.36■□□□□ 0.37
FOXA1-202ENST00000545425 HERVK_113P61574 105 aa17.36■□□□□ 0.37
FOXA1-202ENST00000545425 MAPKAPK5-AS1Q8N8E1 139 aa17.36■□□□□ 0.37
FOXA1-202ENST00000545425 CSPG4Q6UVK1 2322 aa17.36■□□□□ 0.37
FOXA1-202ENST00000545425 A0A0J9YX75 114 aa17.35■□□□□ 0.37
FOXA1-202ENST00000545425 A0A1B0GWB2 263 aa17.35■□□□□ 0.37
FOXA1-202ENST00000545425 PRSS29PA6NIE9 313 aa17.35■□□□□ 0.37
FOXA1-202ENST00000545425 K7EQG2 157 aa17.35■□□□□ 0.37
FOXA1-202ENST00000545425 NEGR1Q7Z3B1 354 aa17.35■□□□□ 0.37
FOXA1-202ENST00000545425 AVPP01185 164 aa17.35■□□□□ 0.37
FOXA1-202ENST00000545425 HIST1H4GQ99525 98 aa17.35■□□□□ 0.37
FOXA1-202ENST00000545425 TTTY13Q9BZ97 58 aa17.35■□□□□ 0.37
FOXA1-202ENST00000545425 TRBV7-3A0A075B6L6 115 aa17.34■□□□□ 0.37
FOXA1-202ENST00000545425 TRBV27A0A0K0K1C4 114 aa17.34■□□□□ 0.37
FOXA1-202ENST00000545425 LGALS1P09382 135 aaKnown RBP17.34■□□□□ 0.37
FOXA1-202ENST00000545425 CD7P09564 240 aa17.34■□□□□ 0.37
FOXA1-202ENST00000545425 DEFB1P60022 68 aa17.34■□□□□ 0.37
FOXA1-202ENST00000545425 VPS25Q9BRG1 176 aa17.34■□□□□ 0.37
FOXA1-202ENST00000545425 NHP2Q9NX24 153 aaKnown RBP17.34■□□□□ 0.37
FOXA1-202ENST00000545425 IGKV3-7A0A075B6H7 116 aa17.33■□□□□ 0.37
FOXA1-202ENST00000545425 IGHV3-16A0A0C4DH30 117 aa17.33■□□□□ 0.37
FOXA1-202ENST00000545425 RHOHQ15669 191 aa17.33■□□□□ 0.37
FOXA1-202ENST00000545425 RNF151Q2KHN1 245 aa17.33■□□□□ 0.37
FOXA1-202ENST00000545425 DEFB112Q30KQ8 113 aa17.33■□□□□ 0.37
FOXA1-202ENST00000545425 SUMO4Q6EEV6 95 aa17.33■□□□□ 0.37
FOXA1-202ENST00000545425 MAPK1IP1LQ8NDC0 245 aa17.33■□□□□ 0.37
FOXA1-202ENST00000545425 TLN2Q9Y4G6 2542 aa17.33■□□□□ 0.36
FOXA1-202ENST00000545425 HIVEP2P31629 2446 aa17.33■□□□□ 0.36
FOXA1-202ENST00000545425 TMEM238LA0A1B0GVL6 79 aa17.33■□□□□ 0.36
FOXA1-202ENST00000545425 A6NJY4 79 aa17.33■□□□□ 0.36
FOXA1-202ENST00000545425 PMVKQ15126 192 aa17.33■□□□□ 0.36
FOXA1-202ENST00000545425 ZFP2Q6ZN57 461 aa17.33■□□□□ 0.36
FOXA1-202ENST00000545425 NSD1Q96L73 2696 aaPredicted RBP17.33■□□□□ 0.36
FOXA1-202ENST00000545425 IGIPA6NJ69 53 aa17.32■□□□□ 0.36
FOXA1-202ENST00000545425 LCNL1Q6ZST4 164 aa17.32■□□□□ 0.36
FOXA1-202ENST00000545425 ZANQ9Y493 2812 aa17.31■□□□□ 0.36
FOXA1-202ENST00000545425 IGHV4-59P01825 116 aa17.31■□□□□ 0.36
FOXA1-202ENST00000545425 C12orf74Q32Q52 190 aa17.31■□□□□ 0.36
FOXA1-202ENST00000545425 A0A096LNT2 108 aa17.31■□□□□ 0.36
FOXA1-202ENST00000545425 FOXI2Q6ZQN5 318 aa17.31■□□□□ 0.36
FOXA1-202ENST00000545425 VPREB3Q9UKI3 123 aa17.31■□□□□ 0.36
FOXA1-202ENST00000545425 TRGV11A0A075B6L2 103 aa17.3■□□□□ 0.36
FOXA1-202ENST00000545425 IGHV1OR15-1A0A075B7D0 117 aa17.3■□□□□ 0.36
FOXA1-202ENST00000545425 TRAV12-3A0A0B4J271 114 aa17.3■□□□□ 0.36
FOXA1-202ENST00000545425 IGLL5B9A064 214 aa17.3■□□□□ 0.36
FOXA1-202ENST00000545425 UBE2E2Q96LR5 201 aa17.3■□□□□ 0.36
FOXA1-202ENST00000545425 PRADC1Q9BSG0 188 aa17.3■□□□□ 0.36
FOXA1-202ENST00000545425 KRTAP1-1Q07627 177 aa17.29■□□□□ 0.36
FOXA1-202ENST00000545425 TRPT1Q86TN4 253 aaKnown RBP17.29■□□□□ 0.36
FOXA1-202ENST00000545425 TRAV2A0A0B4J234 112 aa17.28■□□□□ 0.36
FOXA1-202ENST00000545425 SRD5A1P18405 259 aa17.28■□□□□ 0.36
FOXA1-202ENST00000545425 NSUN5P1Q3KNT7 163 aa17.28■□□□□ 0.36
FOXA1-202ENST00000545425 KRTAP21-3Q3LHN1 58 aa17.28■□□□□ 0.36
FOXA1-202ENST00000545425 EDA2RQ9HAV5 297 aa17.28■□□□□ 0.36
FOXA1-202ENST00000545425 TP53TG1Q9Y2A0 90 aa17.28■□□□□ 0.36
FOXA1-202ENST00000545425 ZNF256Q9Y2P7 627 aaPredicted RBP17.28■□□□□ 0.36
FOXA1-202ENST00000545425 G3V4G9 280 aa17.28■□□□□ 0.36
FOXA1-202ENST00000545425 SCGB2A2Q13296 93 aa17.28■□□□□ 0.36
FOXA1-202ENST00000545425 ZNF479Q96JC4 524 aa17.28■□□□□ 0.36
FOXA1-202ENST00000545425 SDHAF1A6NFY7 115 aa17.27■□□□□ 0.36
FOXA1-202ENST00000545425 F5H697 171 aa17.27■□□□□ 0.36
FOXA1-202ENST00000545425 F8W1H4 67 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 174.3 ms