RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 SMIM12Q96EX1 92 aa6.7□□□□□ -1.34
TNFRSF1A-214ENST00000543048 K7EQD1 137 aa6.69□□□□□ -1.34
TNFRSF1A-214ENST00000543048 M0R036 132 aa6.69□□□□□ -1.34
TNFRSF1A-214ENST00000543048 RS1O15537 224 aa6.69□□□□□ -1.34
TNFRSF1A-214ENST00000543048 GYPEP15421 78 aa6.69□□□□□ -1.34
TNFRSF1A-214ENST00000543048 RPL23P62829 140 aaKnown RBP6.69□□□□□ -1.34
TNFRSF1A-214ENST00000543048 RHEBQ15382 184 aa6.69□□□□□ -1.34
TNFRSF1A-214ENST00000543048 ADIRFQ15847 76 aa6.69□□□□□ -1.34
TNFRSF1A-214ENST00000543048 TTC32Q5I0X7 151 aa6.69□□□□□ -1.34
TNFRSF1A-214ENST00000543048 COX8CQ7Z4L0 72 aa6.69□□□□□ -1.34
TNFRSF1A-214ENST00000543048 LINC01551Q86U37 167 aa6.69□□□□□ -1.34
TNFRSF1A-214ENST00000543048 BAGE2Q86Y30 109 aa6.69□□□□□ -1.34
TNFRSF1A-214ENST00000543048 C9orf85Q96MD7 179 aa6.69□□□□□ -1.34
TNFRSF1A-214ENST00000543048 PKHD1P08F94 4074 aa6.69□□□□□ -1.34
TNFRSF1A-214ENST00000543048 IGKV3D-20A0A0C4DH25 116 aa6.68□□□□□ -1.34
TNFRSF1A-214ENST00000543048 PGPEP1LA6NFU8 196 aa6.68□□□□□ -1.34
TNFRSF1A-214ENST00000543048 B4DEV8 164 aa6.68□□□□□ -1.34
TNFRSF1A-214ENST00000543048 SIVA1O15304 175 aa6.68□□□□□ -1.34
TNFRSF1A-214ENST00000543048 RNASE3P12724 160 aaKnown RBP6.68□□□□□ -1.34
TNFRSF1A-214ENST00000543048 GATA1P15976 413 aaPredicted RBP6.68□□□□□ -1.34
TNFRSF1A-214ENST00000543048 BTF3P20290 206 aaKnown RBP6.68□□□□□ -1.34
TNFRSF1A-214ENST00000543048 S100A4P26447 101 aaKnown RBP6.68□□□□□ -1.34
TNFRSF1A-214ENST00000543048 SRIP30626 198 aa6.68□□□□□ -1.34
TNFRSF1A-214ENST00000543048 CRIP1P50238 77 aa6.68□□□□□ -1.34
TNFRSF1A-214ENST00000543048 CFAP126Q5VTH2 177 aa6.68□□□□□ -1.34
TNFRSF1A-214ENST00000543048 SH2D6Q7Z4S9 175 aa6.68□□□□□ -1.34
TNFRSF1A-214ENST00000543048 KRTAP4-12Q9BQ66 201 aa6.68□□□□□ -1.34
TNFRSF1A-214ENST00000543048 K7EN84 100 aa6.67□□□□□ -1.34
TNFRSF1A-214ENST00000543048 NXPH4O95158 308 aa6.67□□□□□ -1.34
TNFRSF1A-214ENST00000543048 IGLV2-8P01709 118 aa6.67□□□□□ -1.34
TNFRSF1A-214ENST00000543048 MGST1P10620 155 aaKnown RBP6.67□□□□□ -1.34
TNFRSF1A-214ENST00000543048 FAM162BQ5T6X4 162 aa6.67□□□□□ -1.34
TNFRSF1A-214ENST00000543048 NHLRC2Q8NBF2 726 aa6.67□□□□□ -1.34
TNFRSF1A-214ENST00000543048 OCC1Q8TAD7 63 aa6.67□□□□□ -1.34
TNFRSF1A-214ENST00000543048 ISOC2Q96AB3 205 aa6.67□□□□□ -1.34
TNFRSF1A-214ENST00000543048 ZC2HC1AQ96GY0 325 aa6.67□□□□□ -1.34
TNFRSF1A-214ENST00000543048 BIN3Q9NQY0 253 aa6.67□□□□□ -1.34
TNFRSF1A-214ENST00000543048 DNAH11Q96DT5 4516 aa6.66□□□□□ -1.34
TNFRSF1A-214ENST00000543048 C7orf77A4D0Y5 90 aa6.66□□□□□ -1.34
TNFRSF1A-214ENST00000543048 SH2D1AO60880 128 aa6.66□□□□□ -1.34
TNFRSF1A-214ENST00000543048 ASIPP42127 132 aa6.66□□□□□ -1.34
TNFRSF1A-214ENST00000543048 PIK3CD-AS1Q5SR53 167 aa6.66□□□□□ -1.34
TNFRSF1A-214ENST00000543048 DNLZQ5SXM8 178 aa6.66□□□□□ -1.34
TNFRSF1A-214ENST00000543048 ATRAIDQ6UW56 229 aa6.66□□□□□ -1.34
TNFRSF1A-214ENST00000543048 MLST8Q9BVC4 326 aa6.66□□□□□ -1.34
TNFRSF1A-214ENST00000543048 KRTAP1-5Q9BYS1 174 aa6.66□□□□□ -1.34
TNFRSF1A-214ENST00000543048 TRAV9-2A0A087WT02 112 aa6.65□□□□□ -1.34
TNFRSF1A-214ENST00000543048 A0A087WWC5 75 aa6.65□□□□□ -1.34
TNFRSF1A-214ENST00000543048 IGHV3-73A0A0B4J1V6 119 aa6.65□□□□□ -1.34
TNFRSF1A-214ENST00000543048 LOC100131303A0A0U1RQF7 123 aa6.65□□□□□ -1.34
TNFRSF1A-214ENST00000543048 TRBV6-4A0A1B0GX49 114 aa6.65□□□□□ -1.34
TNFRSF1A-214ENST00000543048 A8MWV9 139 aa6.65□□□□□ -1.34
TNFRSF1A-214ENST00000543048 PPP1R2P9O14990 202 aa6.65□□□□□ -1.34
TNFRSF1A-214ENST00000543048 MT-ND4LP03901 98 aa6.65□□□□□ -1.34
TNFRSF1A-214ENST00000543048 KRTAP19-1Q8IUB9 90 aa6.65□□□□□ -1.34
TNFRSF1A-214ENST00000543048 SLC25A29Q8N8R3 303 aa6.65□□□□□ -1.34
TNFRSF1A-214ENST00000543048 SFRP2Q96HF1 295 aa6.65□□□□□ -1.34
TNFRSF1A-214ENST00000543048 PRADC1Q9BSG0 188 aa6.65□□□□□ -1.34
TNFRSF1A-214ENST00000543048 RPS10P5Q9NQ39 176 aa6.65□□□□□ -1.34
TNFRSF1A-214ENST00000543048 IL36BQ9NZH7 164 aa6.65□□□□□ -1.34
TNFRSF1A-214ENST00000543048 DYNC1H1Q14204 4646 aaKnown RBP6.64□□□□□ -1.35
TNFRSF1A-214ENST00000543048 GRIFINA4D1Z8 144 aa6.64□□□□□ -1.35
TNFRSF1A-214ENST00000543048 ARMS2P0C7Q2 107 aa6.64□□□□□ -1.35
TNFRSF1A-214ENST00000543048 TIRAPP58753 221 aa6.64□□□□□ -1.35
TNFRSF1A-214ENST00000543048 ERVFC1-1P60608 527 aa6.64□□□□□ -1.35
TNFRSF1A-214ENST00000543048 PRR27Q6MZM9 219 aa6.64□□□□□ -1.35
TNFRSF1A-214ENST00000543048 ZFP2Q6ZN57 461 aa6.64□□□□□ -1.35
TNFRSF1A-214ENST00000543048 FAM231DQ6ZW35 169 aa6.64□□□□□ -1.35
TNFRSF1A-214ENST00000543048 ZNF575Q86XF7 245 aa6.64□□□□□ -1.35
TNFRSF1A-214ENST00000543048 C15orf54Q8N8G6 183 aa6.64□□□□□ -1.35
TNFRSF1A-214ENST00000543048 SYT8Q8NBV8 401 aa6.64□□□□□ -1.35
TNFRSF1A-214ENST00000543048 OR10G8Q8NGN5 311 aa6.64□□□□□ -1.35
TNFRSF1A-214ENST00000543048 ANAPC16Q96DE5 110 aa6.64□□□□□ -1.35
TNFRSF1A-214ENST00000543048 CTDSP1Q9GZU7 261 aa6.64□□□□□ -1.35
TNFRSF1A-214ENST00000543048 OSTCQ9NRP0 149 aa6.64□□□□□ -1.35
TNFRSF1A-214ENST00000543048 H3BVH4 76 aa6.63□□□□□ -1.35
TNFRSF1A-214ENST00000543048 K7EP13 123 aa6.63□□□□□ -1.35
TNFRSF1A-214ENST00000543048 EVI2AP22794 236 aa6.63□□□□□ -1.35
TNFRSF1A-214ENST00000543048 RHOHQ15669 191 aa6.63□□□□□ -1.35
TNFRSF1A-214ENST00000543048 TMEM242Q9NWH2 141 aa6.63□□□□□ -1.35
TNFRSF1A-214ENST00000543048 PHLDA3Q9Y5J5 127 aa6.63□□□□□ -1.35
TNFRSF1A-214ENST00000543048 TMSB15BA0A087X1C1 80 aa6.62□□□□□ -1.35
TNFRSF1A-214ENST00000543048 C19orf71A6NCJ1 209 aa6.62□□□□□ -1.35
TNFRSF1A-214ENST00000543048 SCO1O75880 301 aa6.62□□□□□ -1.35
TNFRSF1A-214ENST00000543048 P01737 135 aa6.62□□□□□ -1.35
TNFRSF1A-214ENST00000543048 MED14OSP0DP75 135 aa6.62□□□□□ -1.35
TNFRSF1A-214ENST00000543048 LINC00315P59091 139 aa6.62□□□□□ -1.35
TNFRSF1A-214ENST00000543048 Q6ZSN1 163 aa6.62□□□□□ -1.35
TNFRSF1A-214ENST00000543048 ATP6V0E2Q8NHE4 81 aa6.62□□□□□ -1.35
TNFRSF1A-214ENST00000543048 DAZAP1Q96EP5 407 aaKnown RBP6.62□□□□□ -1.35
TNFRSF1A-214ENST00000543048 RNASE7Q9H1E1 156 aaKnown RBP6.62□□□□□ -1.35
TNFRSF1A-214ENST00000543048 JPT2Q9H910 190 aa6.62□□□□□ -1.35
TNFRSF1A-214ENST00000543048 SCRT2Q9NQ03 307 aa6.62□□□□□ -1.35
TNFRSF1A-214ENST00000543048 SMCO4Q9NRQ5 59 aa6.62□□□□□ -1.35
TNFRSF1A-214ENST00000543048 HERC2O95714 4834 aa6.61□□□□□ -1.35
TNFRSF1A-214ENST00000543048 TRAV8-6A0A0B4J262 113 aa6.61□□□□□ -1.35
TNFRSF1A-214ENST00000543048 GATCO43716 136 aaKnown RBP6.61□□□□□ -1.35
TNFRSF1A-214ENST00000543048 DNAH10OSP0CZ25 163 aa6.61□□□□□ -1.35
TNFRSF1A-214ENST00000543048 CT83Q5H943 113 aa6.61□□□□□ -1.35
TNFRSF1A-214ENST00000543048 UFSP1Q6NVU6 142 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms