RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 CFAP54Q96N23 3096 aa6.29□□□□□ -1.4
PRKAB1-207ENST00000542698 TCTEX1D4Q5JR98 221 aa6.29□□□□□ -1.4
PRKAB1-207ENST00000542698 ATP6V0BQ99437 205 aa6.29□□□□□ -1.4
PRKAB1-207ENST00000542698 U3KQK5 164 aa6.29□□□□□ -1.4
PRKAB1-207ENST00000542698 TRGV1A0A0A0MS02 117 aa6.29□□□□□ -1.4
PRKAB1-207ENST00000542698 C2orf91Q6ZV80 131 aa6.29□□□□□ -1.4
PRKAB1-207ENST00000542698 CCDC140Q96MF4 163 aa6.29□□□□□ -1.4
PRKAB1-207ENST00000542698 SPTBN4Q9H254 2564 aa6.28□□□□□ -1.4
PRKAB1-207ENST00000542698 ADARB2-AS1A8MUL3 147 aa6.28□□□□□ -1.4
PRKAB1-207ENST00000542698 E9PLD3 99 aa6.28□□□□□ -1.4
PRKAB1-207ENST00000542698 EBI3Q14213 229 aa6.28□□□□□ -1.4
PRKAB1-207ENST00000542698 UNQ9165/PRO28630Q6UXU0 137 aa6.28□□□□□ -1.4
PRKAB1-207ENST00000542698 ZFP2Q6ZN57 461 aa6.28□□□□□ -1.4
PRKAB1-207ENST00000542698 LINC01356Q8N9X3 169 aa6.28□□□□□ -1.4
PRKAB1-207ENST00000542698 TOMM6Q96B49 74 aa6.28□□□□□ -1.4
PRKAB1-207ENST00000542698 SMAD5-AS1Q9Y6J3 95 aa6.28□□□□□ -1.4
PRKAB1-207ENST00000542698 IGKV2D-26A0A0A0MRZ7 120 aa6.28□□□□□ -1.4
PRKAB1-207ENST00000542698 IGHV4-61A0A0C4DH41 118 aa6.28□□□□□ -1.4
PRKAB1-207ENST00000542698 RHODO00212 210 aa6.28□□□□□ -1.4
PRKAB1-207ENST00000542698 NDUFA12Q9UI09 145 aa6.28□□□□□ -1.4
PRKAB1-207ENST00000542698 TRAV13-1A0A0B4J241 112 aa6.28□□□□□ -1.4
PRKAB1-207ENST00000542698 BAALCQ8WXS3 180 aa6.28□□□□□ -1.4
PRKAB1-207ENST00000542698 UBE2E2Q96LR5 201 aa6.28□□□□□ -1.4
PRKAB1-207ENST00000542698 SUMO4Q6EEV6 95 aa6.28□□□□□ -1.4
PRKAB1-207ENST00000542698 RNF185Q96GF1 192 aa6.28□□□□□ -1.4
PRKAB1-207ENST00000542698 ZNF625Q96I27 306 aaPredicted RBP6.28□□□□□ -1.4
PRKAB1-207ENST00000542698 WDFY3Q8IZQ1 3526 aa6.27□□□□□ -1.41
PRKAB1-207ENST00000542698 TRGV4A0A0C4DH28 118 aa6.27□□□□□ -1.41
PRKAB1-207ENST00000542698 SLC25A20O43772 301 aa6.27□□□□□ -1.41
PRKAB1-207ENST00000542698 IGHV4-38-2P0DP08 117 aa6.27□□□□□ -1.41
PRKAB1-207ENST00000542698 RPL39P62891 51 aaKnown RBP6.27□□□□□ -1.41
PRKAB1-207ENST00000542698 RHOHQ15669 191 aa6.27□□□□□ -1.41
PRKAB1-207ENST00000542698 TMEM95Q3KNT9 176 aa6.27□□□□□ -1.41
PRKAB1-207ENST00000542698 GATD1Q8NB37 220 aa6.27□□□□□ -1.41
PRKAB1-207ENST00000542698 MAPK1IP1LQ8NDC0 245 aa6.27□□□□□ -1.41
PRKAB1-207ENST00000542698 RASL10AQ92737 203 aa6.27□□□□□ -1.41
PRKAB1-207ENST00000542698 TRAV8-3A0A0A6YYJ7 113 aa6.27□□□□□ -1.41
PRKAB1-207ENST00000542698 IGHV3-53P01767 116 aa6.27□□□□□ -1.41
PRKAB1-207ENST00000542698 SCGB1A1P11684 91 aa6.27□□□□□ -1.41
PRKAB1-207ENST00000542698 PRIMA1Q86XR5 153 aa6.27□□□□□ -1.41
PRKAB1-207ENST00000542698 TM2D2Q9BX73 214 aa6.27□□□□□ -1.41
PRKAB1-207ENST00000542698 INSP01308 110 aa6.27□□□□□ -1.41
PRKAB1-207ENST00000542698 RNASE1P07998 156 aaKnown RBP6.27□□□□□ -1.41
PRKAB1-207ENST00000542698 CFC1BP0CG36 223 aa6.27□□□□□ -1.41
PRKAB1-207ENST00000542698 CFC1P0CG37 223 aa6.27□□□□□ -1.41
PRKAB1-207ENST00000542698 ZFAND3Q9H8U3 227 aa6.27□□□□□ -1.41
PRKAB1-207ENST00000542698 IGHV3-16A0A0C4DH30 117 aa6.26□□□□□ -1.41
PRKAB1-207ENST00000542698 TRBV12-3P01733 135 aa6.26□□□□□ -1.41
PRKAB1-207ENST00000542698 MED14OSP0DP75 135 aa6.26□□□□□ -1.41
PRKAB1-207ENST00000542698 LMO4P61968 165 aa6.26□□□□□ -1.41
PRKAB1-207ENST00000542698 XCL2Q9UBD3 114 aa6.26□□□□□ -1.41
PRKAB1-207ENST00000542698 C11orf86A6NJI1 115 aa6.26□□□□□ -1.41
PRKAB1-207ENST00000542698 CHCHD5Q9BSY4 110 aa6.26□□□□□ -1.41
PRKAB1-207ENST00000542698 ABCA2Q9BZC7 2435 aa6.26□□□□□ -1.41
PRKAB1-207ENST00000542698 A0A0J9YXV3 536 aa6.25□□□□□ -1.41
PRKAB1-207ENST00000542698 IGHV4-59P01825 116 aa6.25□□□□□ -1.41
PRKAB1-207ENST00000542698 IGHG2P01859 326 aa6.25□□□□□ -1.41
PRKAB1-207ENST00000542698 ELANEP08246 267 aa6.25□□□□□ -1.41
PRKAB1-207ENST00000542698 LGALS1P09382 135 aaKnown RBP6.25□□□□□ -1.41
PRKAB1-207ENST00000542698 LINC00158P58513 81 aa6.25□□□□□ -1.41
PRKAB1-207ENST00000542698 IGHV3-38A0A0C4DH36 116 aa6.25□□□□□ -1.41
PRKAB1-207ENST00000542698 A4D1N5 150 aa6.25□□□□□ -1.41
PRKAB1-207ENST00000542698 IGF1P05019 195 aa6.25□□□□□ -1.41
PRKAB1-207ENST00000542698 RNASE13Q5GAN3 156 aaKnown RBP6.25□□□□□ -1.41
PRKAB1-207ENST00000542698 JPT2Q9H910 190 aa6.25□□□□□ -1.41
PRKAB1-207ENST00000542698 TNRC6BQ9UPQ9 1833 aaKnown RBP6.25□□□□□ -1.41
PRKAB1-207ENST00000542698 MRPS12O15235 138 aaKnown RBP6.25□□□□□ -1.41
PRKAB1-207ENST00000542698 GAS8-AS1O95177 125 aa6.25□□□□□ -1.41
PRKAB1-207ENST00000542698 Q71RC1 249 aaPredicted RBP6.25□□□□□ -1.41
PRKAB1-207ENST00000542698 MAPKAPK5-AS1Q8N8E1 139 aa6.25□□□□□ -1.41
PRKAB1-207ENST00000542698 TIMM17AQ99595 171 aa6.25□□□□□ -1.41
PRKAB1-207ENST00000542698 RNF223E7ERA6 249 aa6.24□□□□□ -1.41
PRKAB1-207ENST00000542698 K7EMT4 169 aa6.24□□□□□ -1.41
PRKAB1-207ENST00000542698 DEFB112Q30KQ8 113 aa6.24□□□□□ -1.41
PRKAB1-207ENST00000542698 Q8N1Y9 231 aa6.24□□□□□ -1.41
PRKAB1-207ENST00000542698 VPS13AQ96RL7 3174 aa6.24□□□□□ -1.41
PRKAB1-207ENST00000542698 RBMY1BA6NDE4 496 aaKnown RBP6.24□□□□□ -1.41
PRKAB1-207ENST00000542698 RBMY1EA6NEQ0 496 aaKnown RBP6.24□□□□□ -1.41
PRKAB1-207ENST00000542698 RBMY1DP0C7P1 496 aaKnown RBP6.24□□□□□ -1.41
PRKAB1-207ENST00000542698 RBMY1A1P0DJD3 496 aaKnown RBP6.24□□□□□ -1.41
PRKAB1-207ENST00000542698 RBMY1CP0DJD4 496 aa6.24□□□□□ -1.41
PRKAB1-207ENST00000542698 ZNRF2Q8NHG8 242 aa6.24□□□□□ -1.41
PRKAB1-207ENST00000542698 PF4P02776 101 aa6.24□□□□□ -1.41
PRKAB1-207ENST00000542698 NTN5Q8WTR8 489 aaPredicted RBP6.24□□□□□ -1.41
PRKAB1-207ENST00000542698 C1QTNF4Q9BXJ3 329 aa6.24□□□□□ -1.41
PRKAB1-207ENST00000542698 IGHV4-30-2A0A087WSY4 118 aa6.23□□□□□ -1.41
PRKAB1-207ENST00000542698 H3BMM0 161 aa6.23□□□□□ -1.41
PRKAB1-207ENST00000542698 LEPROTO15243 131 aa6.23□□□□□ -1.41
PRKAB1-207ENST00000542698 HOXD3P31249 432 aaPredicted RBP6.23□□□□□ -1.41
PRKAB1-207ENST00000542698 Q8N6K4 173 aa6.23□□□□□ -1.41
PRKAB1-207ENST00000542698 UBE2WQ96B02 151 aa6.23□□□□□ -1.41
PRKAB1-207ENST00000542698 CNFNQ9BYD5 112 aa6.23□□□□□ -1.41
PRKAB1-207ENST00000542698 C11orf21Q9P2W6 132 aa6.23□□□□□ -1.41
PRKAB1-207ENST00000542698 AGRNO00468 2067 aa6.23□□□□□ -1.41
PRKAB1-207ENST00000542698 HIVEP2P31629 2446 aa6.23□□□□□ -1.41
PRKAB1-207ENST00000542698 FRYLO94915 3013 aa6.23□□□□□ -1.41
PRKAB1-207ENST00000542698 TEN1Q86WV5 123 aa6.23□□□□□ -1.41
PRKAB1-207ENST00000542698 GPHB5Q86YW7 130 aa6.23□□□□□ -1.41
PRKAB1-207ENST00000542698 LINC01619G3V211 115 aa6.23□□□□□ -1.41
PRKAB1-207ENST00000542698 CMC4P56277 68 aaPredicted RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 169.1 ms