RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 FGFBP3Q8TAT2 258 aa3.23□□□□□ -1.89
SNHG1-219ENST00000542112 RNF185Q96GF1 192 aa3.23□□□□□ -1.89
SNHG1-219ENST00000542112 IMMP1LQ96LU5 166 aa3.23□□□□□ -1.89
SNHG1-219ENST00000542112 C17orf77Q96MU5 243 aa3.23□□□□□ -1.89
SNHG1-219ENST00000542112 RPP25Q9BUL9 199 aaKnown RBP3.23□□□□□ -1.89
SNHG1-219ENST00000542112 Q9H3A6 140 aa3.23□□□□□ -1.89
SNHG1-219ENST00000542112 RBM12B-AS1Q9P1G2 102 aa3.23□□□□□ -1.89
SNHG1-219ENST00000542112 AGRNO00468 2067 aa3.23□□□□□ -1.89
SNHG1-219ENST00000542112 COL5A1P20908 1838 aaPredicted RBP3.22□□□□□ -1.89
SNHG1-219ENST00000542112 CACNA1CQ13936 2221 aa3.22□□□□□ -1.89
SNHG1-219ENST00000542112 IGHV4-4A0A075B6R2 117 aa3.22□□□□□ -1.89
SNHG1-219ENST00000542112 J3QT63 122 aa3.22□□□□□ -1.89
SNHG1-219ENST00000542112 M0R3E3 92 aa3.22□□□□□ -1.89
SNHG1-219ENST00000542112 IGLV2-11P01706 119 aa3.22□□□□□ -1.89
SNHG1-219ENST00000542112 BRWD1-AS2P59051 145 aa3.22□□□□□ -1.89
SNHG1-219ENST00000542112 ERHP84090 104 aaKnown RBP3.22□□□□□ -1.89
SNHG1-219ENST00000542112 ECSCRQ19T08 205 aa3.22□□□□□ -1.89
SNHG1-219ENST00000542112 SFTA2Q6UW10 78 aa3.22□□□□□ -1.89
SNHG1-219ENST00000542112 C16orf47Q6ZP98 133 aaPredicted RBP3.22□□□□□ -1.89
SNHG1-219ENST00000542112 Q6ZVQ6 151 aa3.22□□□□□ -1.89
SNHG1-219ENST00000542112 C20orf197Q8N268 126 aa3.22□□□□□ -1.89
SNHG1-219ENST00000542112 ZNF491Q8N8L2 437 aa3.22□□□□□ -1.89
SNHG1-219ENST00000542112 RNASE6Q93091 150 aaKnown RBP3.22□□□□□ -1.89
SNHG1-219ENST00000542112 OBSCN-AS1Q96MR7 158 aa3.22□□□□□ -1.89
SNHG1-219ENST00000542112 TIMM17AQ99595 171 aa3.22□□□□□ -1.89
SNHG1-219ENST00000542112 C11orf68Q9H3H3 251 aaKnown RBP3.22□□□□□ -1.89
SNHG1-219ENST00000542112 PHPT1Q9NRX4 125 aaPredicted RBP3.22□□□□□ -1.89
SNHG1-219ENST00000542112 LAMA3Q16787 3333 aa3.22□□□□□ -1.89
SNHG1-219ENST00000542112 CDH23Q9H251 3354 aa3.21□□□□□ -1.89
SNHG1-219ENST00000542112 MPDZO75970 2070 aa3.21□□□□□ -1.89
SNHG1-219ENST00000542112 SPTBN5Q9NRC6 3674 aaKnown RBP3.21□□□□□ -1.9
SNHG1-219ENST00000542112 IGHV3OR16-10A0A075B7F0 116 aa3.21□□□□□ -1.9
SNHG1-219ENST00000542112 A0A0A0MQY5 61 aa3.21□□□□□ -1.9
SNHG1-219ENST00000542112 FAM223BA6NKX1 122 aa3.21□□□□□ -1.9
SNHG1-219ENST00000542112 H0YGG7 62 aa3.21□□□□□ -1.9
SNHG1-219ENST00000542112 SMKR1H3BMG3 65 aa3.21□□□□□ -1.9
SNHG1-219ENST00000542112 FSHBP01225 129 aa3.21□□□□□ -1.9
SNHG1-219ENST00000542112 CLPSP04118 112 aa3.21□□□□□ -1.9
SNHG1-219ENST00000542112 PROK1P58294 105 aa3.21□□□□□ -1.9
SNHG1-219ENST00000542112 Q0VFX4 171 aa3.21□□□□□ -1.9
SNHG1-219ENST00000542112 ZNF876PQ49A33 203 aa3.21□□□□□ -1.9
SNHG1-219ENST00000542112 PRNTQ86SH4 94 aa3.21□□□□□ -1.9
SNHG1-219ENST00000542112 GGNQ86UU5 652 aa3.21□□□□□ -1.9
SNHG1-219ENST00000542112 MUSTN1Q8IVN3 82 aa3.21□□□□□ -1.9
SNHG1-219ENST00000542112 SMIM2Q9BVW6 85 aa3.21□□□□□ -1.9
SNHG1-219ENST00000542112 TANC2Q9HCD6 1990 aa3.21□□□□□ -1.9
SNHG1-219ENST00000542112 ZDBF2Q9HCK1 2354 aa3.2□□□□□ -1.9
SNHG1-219ENST00000542112 HEATR1Q9H583 2144 aaKnown RBP3.2□□□□□ -1.9
SNHG1-219ENST00000542112 COL27A1Q8IZC6 1860 aaPredicted RBP3.2□□□□□ -1.9
SNHG1-219ENST00000542112 IGKV1OR2-108A0A075B7D4 117 aa3.2□□□□□ -1.9
SNHG1-219ENST00000542112 IGIPA6NJ69 53 aa3.2□□□□□ -1.9
SNHG1-219ENST00000542112 I3L3M4 83 aa3.2□□□□□ -1.9
SNHG1-219ENST00000542112 CCL21O00585 134 aa3.2□□□□□ -1.9
SNHG1-219ENST00000542112 IGKV3-11P04433 115 aa3.2□□□□□ -1.9
SNHG1-219ENST00000542112 PRSS2P07478 247 aa3.2□□□□□ -1.9
SNHG1-219ENST00000542112 BAALC-AS2P0C853 105 aa3.2□□□□□ -1.9
SNHG1-219ENST00000542112 CXCL6P80162 114 aa3.2□□□□□ -1.9
SNHG1-219ENST00000542112 FAM223AQ8IWN6 122 aa3.2□□□□□ -1.9
SNHG1-219ENST00000542112 TMEM61Q8N0U2 210 aa3.2□□□□□ -1.9
SNHG1-219ENST00000542112 FLVCR1-AS1Q8TAF5 88 aa3.2□□□□□ -1.9
SNHG1-219ENST00000542112 EEF1AKMT3Q96AZ1 226 aa3.2□□□□□ -1.9
SNHG1-219ENST00000542112 AMELXQ99217 191 aa3.2□□□□□ -1.9
SNHG1-219ENST00000542112 A0A087X002 238 aa3.19□□□□□ -1.9
SNHG1-219ENST00000542112 TRAV8-3A0A0A6YYJ7 113 aa3.19□□□□□ -1.9
SNHG1-219ENST00000542112 IGHV5-51A0A0C4DH38 117 aa3.19□□□□□ -1.9
SNHG1-219ENST00000542112 JMJD7-PLA2G4BH0Y9G9 81 aa3.19□□□□□ -1.9
SNHG1-219ENST00000542112 M0R378 163 aa3.19□□□□□ -1.9
SNHG1-219ENST00000542112 SOCS3O14543 225 aa3.19□□□□□ -1.9
SNHG1-219ENST00000542112 IGHV1-69P01742 117 aa3.19□□□□□ -1.9
SNHG1-219ENST00000542112 IGHV4-34P06331 123 aa3.19□□□□□ -1.9
SNHG1-219ENST00000542112 CD28P10747 220 aa3.19□□□□□ -1.9
SNHG1-219ENST00000542112 MIFP14174 115 aa3.19□□□□□ -1.9
SNHG1-219ENST00000542112 LPAL2Q16609 132 aa3.19□□□□□ -1.9
SNHG1-219ENST00000542112 MIAQ16674 131 aa3.19□□□□□ -1.9
SNHG1-219ENST00000542112 NSUN5P1Q3KNT7 163 aa3.19□□□□□ -1.9
SNHG1-219ENST00000542112 PIK3CD-AS1Q5SR53 167 aa3.19□□□□□ -1.9
SNHG1-219ENST00000542112 C2orf66Q6UXQ4 117 aa3.19□□□□□ -1.9
SNHG1-219ENST00000542112 PATE2Q6UY27 113 aa3.19□□□□□ -1.9
SNHG1-219ENST00000542112 ATP11AUNQ6ZP68 121 aa3.19□□□□□ -1.9
SNHG1-219ENST00000542112 NRACQ8N912 160 aa3.19□□□□□ -1.9
SNHG1-219ENST00000542112 ZNF524Q96C55 264 aa3.19□□□□□ -1.9
SNHG1-219ENST00000542112 ESM1Q9NQ30 184 aa3.19□□□□□ -1.9
SNHG1-219ENST00000542112 DEC1Q9P2X7 70 aa3.19□□□□□ -1.9
SNHG1-219ENST00000542112 SPRR3Q9UBC9 169 aa3.19□□□□□ -1.9
SNHG1-219ENST00000542112 ZNF318Q5VUA4 2279 aa3.19□□□□□ -1.9
SNHG1-219ENST00000542112 PCNX2A6NKB5 2137 aa3.19□□□□□ -1.9
SNHG1-219ENST00000542112 RAI1Q7Z5J4 1906 aaPredicted RBP3.19□□□□□ -1.9
SNHG1-219ENST00000542112 EML6Q6ZMW3 1958 aa3.18□□□□□ -1.9
SNHG1-219ENST00000542112 TRIOO75962 3097 aa3.18□□□□□ -1.9
SNHG1-219ENST00000542112 IGLV4-69A0A075B6H9 119 aa3.18□□□□□ -1.9
SNHG1-219ENST00000542112 C12orf77C9JDV5 145 aa3.18□□□□□ -1.9
SNHG1-219ENST00000542112 E7EQL1 145 aa3.18□□□□□ -1.9
SNHG1-219ENST00000542112 F8WEM9 126 aa3.18□□□□□ -1.9
SNHG1-219ENST00000542112 H0YGX0 51 aa3.18□□□□□ -1.9
SNHG1-219ENST00000542112 EFNA2O43921 213 aa3.18□□□□□ -1.9
SNHG1-219ENST00000542112 STATHP02808 62 aa3.18□□□□□ -1.9
SNHG1-219ENST00000542112 CIRBPQ14011 172 aaKnown RBP3.18□□□□□ -1.9
SNHG1-219ENST00000542112 SPINK9Q5DT21 86 aa3.18□□□□□ -1.9
SNHG1-219ENST00000542112 FAM53AQ6NSI3 398 aaPredicted RBP3.18□□□□□ -1.9
SNHG1-219ENST00000542112 LCA10Q71F78 164 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms