RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 IGHV1-69P01742 117 aa3.85□□□□□ -1.79
SNHG1-218ENST00000541615 CLPSP04118 112 aa3.85□□□□□ -1.79
SNHG1-218ENST00000541615 FUSP35637 526 aaKnown RBP eCLIP3.85□□□□□ -1.79
SNHG1-218ENST00000541615 SUMO2P61956 95 aaKnown RBP3.85□□□□□ -1.79
SNHG1-218ENST00000541615 NNATQ16517 81 aa3.85□□□□□ -1.79
SNHG1-218ENST00000541615 C7orf65Q6ZTY9 151 aa3.85□□□□□ -1.79
SNHG1-218ENST00000541615 SEM1Q6ZVN7 128 aa3.85□□□□□ -1.79
SNHG1-218ENST00000541615 Q8NA96 180 aa3.85□□□□□ -1.79
SNHG1-218ENST00000541615 MPLKIPQ8TAP9 179 aa3.85□□□□□ -1.79
SNHG1-218ENST00000541615 CLEC2BQ92478 149 aa3.85□□□□□ -1.79
SNHG1-218ENST00000541615 ZNF524Q96C55 264 aa3.85□□□□□ -1.79
SNHG1-218ENST00000541615 DCTN5Q9BTE1 182 aa3.85□□□□□ -1.79
SNHG1-218ENST00000541615 CYP4F30PQ9H0H9 118 aa3.85□□□□□ -1.79
SNHG1-218ENST00000541615 IGHV5-51A0A0C4DH38 117 aa3.84□□□□□ -1.79
SNHG1-218ENST00000541615 C12orf77C9JDV5 145 aa3.84□□□□□ -1.79
SNHG1-218ENST00000541615 SPRY2O43597 315 aa3.84□□□□□ -1.79
SNHG1-218ENST00000541615 SNRNP200O75643 2136 aaKnown RBP3.84□□□□□ -1.79
SNHG1-218ENST00000541615 IGKV3-11P04433 115 aa3.84□□□□□ -1.79
SNHG1-218ENST00000541615 CRIP1P50238 77 aa3.84□□□□□ -1.79
SNHG1-218ENST00000541615 LPAL2Q16609 132 aa3.84□□□□□ -1.79
SNHG1-218ENST00000541615 RUSC1-AS1Q66K80 236 aa3.84□□□□□ -1.79
SNHG1-218ENST00000541615 PRR26Q8N8Z3 221 aa3.84□□□□□ -1.79
SNHG1-218ENST00000541615 NKAPP1Q8N9T2 125 aa3.84□□□□□ -1.79
SNHG1-218ENST00000541615 SPATA3Q8NHX4 192 aa3.84□□□□□ -1.79
SNHG1-218ENST00000541615 KLF14Q8TD94 323 aaPredicted RBP3.84□□□□□ -1.79
SNHG1-218ENST00000541615 CTSZQ9UBR2 303 aa3.84□□□□□ -1.79
SNHG1-218ENST00000541615 Q9Y3F1 56 aa3.84□□□□□ -1.79
SNHG1-218ENST00000541615 MYOFQ9NZM1 2061 aa3.83□□□□□ -1.8
SNHG1-218ENST00000541615 MYO7AQ13402 2215 aa3.83□□□□□ -1.8
SNHG1-218ENST00000541615 IGLV4-69A0A075B6H9 119 aa3.83□□□□□ -1.8
SNHG1-218ENST00000541615 TRAV23DV6A0A075B6W5 121 aa3.83□□□□□ -1.8
SNHG1-218ENST00000541615 LOC100131303A0A0U1RQF7 123 aa3.83□□□□□ -1.8
SNHG1-218ENST00000541615 H3BQ85 93 aa3.83□□□□□ -1.8
SNHG1-218ENST00000541615 M0R1W7 72 aa3.83□□□□□ -1.8
SNHG1-218ENST00000541615 NTN3O00634 580 aaPredicted RBP3.83□□□□□ -1.8
SNHG1-218ENST00000541615 S100A4P26447 101 aaKnown RBP3.83□□□□□ -1.8
SNHG1-218ENST00000541615 MLANAQ16655 118 aa3.83□□□□□ -1.8
SNHG1-218ENST00000541615 UNQ9165/PRO28630Q6UXU0 137 aa3.83□□□□□ -1.8
SNHG1-218ENST00000541615 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.83□□□□□ -1.8
SNHG1-218ENST00000541615 FLVCR1-AS1Q8TAF5 88 aa3.83□□□□□ -1.8
SNHG1-218ENST00000541615 DIRC1Q969H9 104 aa3.83□□□□□ -1.8
SNHG1-218ENST00000541615 KRTAP4-11Q9BYQ6 195 aa3.83□□□□□ -1.8
SNHG1-218ENST00000541615 LINC00846Q9NV44 126 aa3.83□□□□□ -1.8
SNHG1-218ENST00000541615 GON4LQ3T8J9 2241 aa3.83□□□□□ -1.8
SNHG1-218ENST00000541615 TET1Q8NFU7 2136 aa3.82□□□□□ -1.8
SNHG1-218ENST00000541615 DYSFO75923 2080 aa3.82□□□□□ -1.8
SNHG1-218ENST00000541615 A0A087X002 238 aa3.82□□□□□ -1.8
SNHG1-218ENST00000541615 SPRY3O43610 288 aa3.82□□□□□ -1.8
SNHG1-218ENST00000541615 TRBV12-3P01733 135 aa3.82□□□□□ -1.8
SNHG1-218ENST00000541615 PDE6GP18545 87 aa3.82□□□□□ -1.8
SNHG1-218ENST00000541615 RPL28P46779 137 aaKnown RBP3.82□□□□□ -1.8
SNHG1-218ENST00000541615 ASB16-AS1Q495Z4 193 aa3.82□□□□□ -1.8
SNHG1-218ENST00000541615 SPANXN1Q5VSR9 72 aa3.82□□□□□ -1.8
SNHG1-218ENST00000541615 CCL13Q99616 98 aa3.82□□□□□ -1.8
SNHG1-218ENST00000541615 LIMD2Q9BT23 127 aa3.82□□□□□ -1.8
SNHG1-218ENST00000541615 NDUFA4L2Q9NRX3 87 aa3.82□□□□□ -1.8
SNHG1-218ENST00000541615 MRPL36Q9P0J6 103 aaKnown RBP3.82□□□□□ -1.8
SNHG1-218ENST00000541615 SMAD5-AS1Q9Y6J3 95 aa3.82□□□□□ -1.8
SNHG1-218ENST00000541615 IGKV1D-17A0A075B6S4 117 aa3.81□□□□□ -1.8
SNHG1-218ENST00000541615 A0A087WVE0 104 aa3.81□□□□□ -1.8
SNHG1-218ENST00000541615 E7EUB6 86 aa3.81□□□□□ -1.8
SNHG1-218ENST00000541615 MED14OSP0DP75 135 aa3.81□□□□□ -1.8
SNHG1-218ENST00000541615 EGR2P11161 476 aaPredicted RBP3.81□□□□□ -1.8
SNHG1-218ENST00000541615 CCL4P13236 92 aa3.81□□□□□ -1.8
SNHG1-218ENST00000541615 CD59P13987 128 aa3.81□□□□□ -1.8
SNHG1-218ENST00000541615 ZNF32P17041 273 aa3.81□□□□□ -1.8
SNHG1-218ENST00000541615 HIST2H2BCQ6DN03 193 aa3.81□□□□□ -1.8
SNHG1-218ENST00000541615 HIST2H2BDQ6DRA6 164 aa3.81□□□□□ -1.8
SNHG1-218ENST00000541615 CLEC19AQ6UXS0 136 aa3.81□□□□□ -1.8
SNHG1-218ENST00000541615 ZNF833PQ6ZTB9 187 aa3.81□□□□□ -1.8
SNHG1-218ENST00000541615 ZNF575Q86XF7 245 aa3.81□□□□□ -1.8
SNHG1-218ENST00000541615 C14orf178Q8N769 122 aaPredicted RBP3.81□□□□□ -1.8
SNHG1-218ENST00000541615 Q9H8V8 135 aa3.81□□□□□ -1.8
SNHG1-218ENST00000541615 IGKV1D-37A0A075B6S9 117 aa3.8□□□□□ -1.8
SNHG1-218ENST00000541615 IGHV5-10-1A0A0J9YXX1 117 aa3.8□□□□□ -1.8
SNHG1-218ENST00000541615 KRTAP9-7A8MTY7 169 aa3.8□□□□□ -1.8
SNHG1-218ENST00000541615 A8MUN3 132 aa3.8□□□□□ -1.8
SNHG1-218ENST00000541615 RNASE4P34096 147 aaKnown RBP3.8□□□□□ -1.8
SNHG1-218ENST00000541615 KIAA0087Q14695 138 aa3.8□□□□□ -1.8
SNHG1-218ENST00000541615 ADAMTSL4-AS1Q5T5F5 129 aa3.8□□□□□ -1.8
SNHG1-218ENST00000541615 LINC00269Q8N2A0 174 aa3.8□□□□□ -1.8
SNHG1-218ENST00000541615 Q8N6K4 173 aa3.8□□□□□ -1.8
SNHG1-218ENST00000541615 CCL17Q92583 94 aa3.8□□□□□ -1.8
SNHG1-218ENST00000541615 ADAMTS20P59510 1910 aa3.8□□□□□ -1.8
SNHG1-218ENST00000541615 COL4A6Q14031 1691 aa3.79□□□□□ -1.8
SNHG1-218ENST00000541615 LRRK1Q38SD2 2015 aa3.79□□□□□ -1.8
SNHG1-218ENST00000541615 IGHV4OR15-8A0A075B7B6 117 aa3.79□□□□□ -1.8
SNHG1-218ENST00000541615 A0A087WW49 117 aa3.79□□□□□ -1.8
SNHG1-218ENST00000541615 IGKV3D-11A0A0A0MRZ8 115 aa3.79□□□□□ -1.8
SNHG1-218ENST00000541615 TRBV7-4A0A0J9YYF1 115 aa3.79□□□□□ -1.8
SNHG1-218ENST00000541615 hDV103S1A0JD37 113 aa3.79□□□□□ -1.8
SNHG1-218ENST00000541615 ZNF503-AS2A6NEH8 195 aa3.79□□□□□ -1.8
SNHG1-218ENST00000541615 PRYO14603 147 aa3.79□□□□□ -1.8
SNHG1-218ENST00000541615 SAA1P0DJI8 122 aaPredicted RBP3.79□□□□□ -1.8
SNHG1-218ENST00000541615 MP68P56378 58 aa3.79□□□□□ -1.8
SNHG1-218ENST00000541615 TSPEAR-AS2P59090 65 aa3.79□□□□□ -1.8
SNHG1-218ENST00000541615 ENHOQ6UWT2 76 aa3.79□□□□□ -1.8
SNHG1-218ENST00000541615 SOSTDC1Q6X4U4 206 aa3.79□□□□□ -1.8
SNHG1-218ENST00000541615 LINC01560Q8TB33 94 aa3.79□□□□□ -1.8
SNHG1-218ENST00000541615 TMEM254Q8TBM7 123 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms