RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 ORMDL2Q53FV1 153 aa8.57□□□□□ -1.04
C11orf54-214ENST00000540113 SUMO4Q6EEV6 95 aa8.57□□□□□ -1.04
C11orf54-214ENST00000540113 KRTAP1-3Q8IUG1 177 aa8.57□□□□□ -1.04
C11orf54-214ENST00000540113 DUX3Q96PT4 197 aa8.57□□□□□ -1.04
C11orf54-214ENST00000540113 C20orf78Q9BR46 151 aa8.57□□□□□ -1.04
C11orf54-214ENST00000540113 NAV2Q8IVL1 2488 aa8.57□□□□□ -1.04
C11orf54-214ENST00000540113 ZNF469Q96JG9 3925 aaPredicted RBP8.57□□□□□ -1.04
C11orf54-214ENST00000540113 GAGE12BA1L429 117 aa8.56□□□□□ -1.04
C11orf54-214ENST00000540113 BAALCQ8WXS3 180 aa8.56□□□□□ -1.04
C11orf54-214ENST00000540113 CUBNO60494 3623 aa8.56□□□□□ -1.04
C11orf54-214ENST00000540113 H7C1H1 209 aa8.56□□□□□ -1.04
C11orf54-214ENST00000540113 PRM2P04554 102 aa8.56□□□□□ -1.04
C11orf54-214ENST00000540113 HTN1P15515 57 aa8.56□□□□□ -1.04
C11orf54-214ENST00000540113 RPL39P62891 51 aaKnown RBP8.56□□□□□ -1.04
C11orf54-214ENST00000540113 NEXN-AS1Q8NBZ9 246 aa8.56□□□□□ -1.04
C11orf54-214ENST00000540113 CST9LQ9H4G1 147 aa8.56□□□□□ -1.04
C11orf54-214ENST00000540113 TRBV7-9A0A0J9YWB2 115 aa8.55□□□□□ -1.04
C11orf54-214ENST00000540113 A0A0J9YX75 114 aa8.55□□□□□ -1.04
C11orf54-214ENST00000540113 F8VRH5 84 aa8.55□□□□□ -1.04
C11orf54-214ENST00000540113 MED14OSP0DP75 135 aa8.55□□□□□ -1.04
C11orf54-214ENST00000540113 HOXD3P31249 432 aaPredicted RBP8.55□□□□□ -1.04
C11orf54-214ENST00000540113 Q8N1Y9 231 aa8.55□□□□□ -1.04
C11orf54-214ENST00000540113 NHP2Q9NX24 153 aaKnown RBP8.55□□□□□ -1.04
C11orf54-214ENST00000540113 PRSS29PA6NIE9 313 aa8.55□□□□□ -1.04
C11orf54-214ENST00000540113 K7EQG2 157 aa8.55□□□□□ -1.04
C11orf54-214ENST00000540113 LGALS1P09382 135 aaKnown RBP8.55□□□□□ -1.04
C11orf54-214ENST00000540113 SLURP1P55000 103 aa8.55□□□□□ -1.04
C11orf54-214ENST00000540113 Q96MF0 132 aa8.55□□□□□ -1.04
C11orf54-214ENST00000540113 CREBBPQ92793 2442 aa8.54□□□□□ -1.04
C11orf54-214ENST00000540113 HLA-DRB4P13762 266 aa8.54□□□□□ -1.04
C11orf54-214ENST00000540113 PLNP26678 52 aa8.54□□□□□ -1.04
C11orf54-214ENST00000540113 TP53TG1Q9Y2A0 90 aa8.54□□□□□ -1.04
C11orf54-214ENST00000540113 ZNF256Q9Y2P7 627 aaPredicted RBP8.54□□□□□ -1.04
C11orf54-214ENST00000540113 HLA-DRB4X5D2U9 266 aa8.54□□□□□ -1.04
C11orf54-214ENST00000540113 APCP25054 2843 aa8.54□□□□□ -1.04
C11orf54-214ENST00000540113 IGHV3-16A0A0C4DH30 117 aa8.54□□□□□ -1.04
C11orf54-214ENST00000540113 KNCNA6PVL3 124 aa8.54□□□□□ -1.04
C11orf54-214ENST00000540113 NXPH4O95158 308 aa8.54□□□□□ -1.04
C11orf54-214ENST00000540113 TSHBP01222 138 aa8.54□□□□□ -1.04
C11orf54-214ENST00000540113 SMIM13P0DJ93 91 aa8.54□□□□□ -1.04
C11orf54-214ENST00000540113 SNRPD3P62318 126 aaKnown RBP8.54□□□□□ -1.04
C11orf54-214ENST00000540113 HIGD1BQ9P298 99 aa8.54□□□□□ -1.04
C11orf54-214ENST00000540113 TRAV12-1A0A0B4J245 112 aa8.53□□□□□ -1.04
C11orf54-214ENST00000540113 ELANEP08246 267 aa8.53□□□□□ -1.04
C11orf54-214ENST00000540113 UFSP1Q6NVU6 142 aa8.53□□□□□ -1.04
C11orf54-214ENST00000540113 CEND1Q8N111 149 aa8.53□□□□□ -1.04
C11orf54-214ENST00000540113 TLN2Q9Y4G6 2542 aa8.53□□□□□ -1.04
C11orf54-214ENST00000540113 A0A1W2PPM0 123 aa8.53□□□□□ -1.04
C11orf54-214ENST00000540113 CRYGDP07320 174 aa8.53□□□□□ -1.04
C11orf54-214ENST00000540113 ZNF56Q15929 161 aa8.53□□□□□ -1.04
C11orf54-214ENST00000540113 ZFP2Q6ZN57 461 aa8.53□□□□□ -1.04
C11orf54-214ENST00000540113 RNF152Q8N8N0 203 aa8.53□□□□□ -1.04
C11orf54-214ENST00000540113 CBY1Q9Y3M2 126 aa8.53□□□□□ -1.04
C11orf54-214ENST00000540113 NBPF19A0A087WUL8 3843 aa8.52□□□□□ -1.05
C11orf54-214ENST00000540113 SDHAF1A6NFY7 115 aa8.52□□□□□ -1.05
C11orf54-214ENST00000540113 RBMY1A1P0DJD3 496 aaKnown RBP8.52□□□□□ -1.05
C11orf54-214ENST00000540113 RBMY1CP0DJD4 496 aa8.52□□□□□ -1.05
C11orf54-214ENST00000540113 RBMY1FQ15415 496 aaKnown RBP8.52□□□□□ -1.05
C11orf54-214ENST00000540113 OCIAD2Q56VL3 154 aa8.52□□□□□ -1.05
C11orf54-214ENST00000540113 TCTEX1D4Q5JR98 221 aa8.52□□□□□ -1.05
C11orf54-214ENST00000540113 IGHV3-73A0A0B4J1V6 119 aa8.52□□□□□ -1.05
C11orf54-214ENST00000540113 K7EP34 96 aa8.52□□□□□ -1.05
C11orf54-214ENST00000540113 LGALS9O00182 355 aa8.52□□□□□ -1.05
C11orf54-214ENST00000540113 SAP30O75446 220 aa8.52□□□□□ -1.05
C11orf54-214ENST00000540113 CDKN1BP46527 198 aa8.52□□□□□ -1.05
C11orf54-214ENST00000540113 POLR2KP53803 58 aaKnown RBP8.52□□□□□ -1.05
C11orf54-214ENST00000540113 CD300EQ496F6 205 aaPredicted RBP8.52□□□□□ -1.05
C11orf54-214ENST00000540113 SAMD5Q5TGI4 173 aa8.52□□□□□ -1.05
C11orf54-214ENST00000540113 SAMD13Q5VXD3 122 aa8.52□□□□□ -1.05
C11orf54-214ENST00000540113 MORN3Q6PF18 240 aaPredicted RBP8.52□□□□□ -1.05
C11orf54-214ENST00000540113 POM121L12Q8N7R1 296 aa8.52□□□□□ -1.05
C11orf54-214ENST00000540113 KLHL30-AS1Q8NEE0 82 aa8.52□□□□□ -1.05
C11orf54-214ENST00000540113 UBE2E2Q96LR5 201 aa8.52□□□□□ -1.05
C11orf54-214ENST00000540113 HIST1H4GQ99525 98 aa8.52□□□□□ -1.05
C11orf54-214ENST00000540113 OPRPNQ99935 248 aaPredicted RBP8.52□□□□□ -1.05
C11orf54-214ENST00000540113 SPCS1Q9Y6A9 102 aa8.52□□□□□ -1.05
C11orf54-214ENST00000540113 OR11H12B2RN74 326 aa8.51□□□□□ -1.05
C11orf54-214ENST00000540113 OR11H1Q8NG94 326 aa8.51□□□□□ -1.05
C11orf54-214ENST00000540113 OR11H2Q8NH07 326 aa8.51□□□□□ -1.05
C11orf54-214ENST00000540113 C9orf85Q96MD7 179 aa8.51□□□□□ -1.05
C11orf54-214ENST00000540113 IGHV1OR15-1A0A075B7D0 117 aa8.51□□□□□ -1.05
C11orf54-214ENST00000540113 KHDC1LQ5JSQ8 128 aa8.51□□□□□ -1.05
C11orf54-214ENST00000540113 HIST2H2BCQ6DN03 193 aa8.51□□□□□ -1.05
C11orf54-214ENST00000540113 GTF2H5Q6ZYL4 71 aa8.51□□□□□ -1.05
C11orf54-214ENST00000540113 PHLDA1Q8WV24 401 aaPredicted RBP8.51□□□□□ -1.05
C11orf54-214ENST00000540113 PRADC1Q9BSG0 188 aa8.51□□□□□ -1.05
C11orf54-214ENST00000540113 CYSLTR1Q9Y271 337 aa8.51□□□□□ -1.05
C11orf54-214ENST00000540113 MYO9AB2RTY4 2548 aa8.51□□□□□ -1.05
C11orf54-214ENST00000540113 Q8N2B8 174 aa8.5□□□□□ -1.05
C11orf54-214ENST00000540113 PLEKHB2Q96CS7 222 aa8.5□□□□□ -1.05
C11orf54-214ENST00000540113 ITPR3Q14573 2671 aa8.5□□□□□ -1.05
C11orf54-214ENST00000540113 MYMXA0A1B0GTQ4 84 aa8.5□□□□□ -1.05
C11orf54-214ENST00000540113 C11orf86A6NJI1 115 aa8.5□□□□□ -1.05
C11orf54-214ENST00000540113 PROK1P58294 105 aa8.5□□□□□ -1.05
C11orf54-214ENST00000540113 DEFB131AP59861 70 aa8.5□□□□□ -1.05
C11orf54-214ENST00000540113 ZNF876PQ49A33 203 aa8.5□□□□□ -1.05
C11orf54-214ENST00000540113 TM2D2Q9BX73 214 aa8.5□□□□□ -1.05
C11orf54-214ENST00000540113 TENM4Q6N022 2769 aa8.5□□□□□ -1.05
C11orf54-214ENST00000540113 SONP18583 2426 aaKnown RBP8.49□□□□□ -1.05
C11orf54-214ENST00000540113 IGLV4-69A0A075B6H9 119 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms