RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 KIF25-AS1Q9Y6Z4 181 aa10.45□□□□□ -0.74
SCNN1A-215ENST00000540037 TRAV41A0A0B4J266 112 aa10.44□□□□□ -0.74
SCNN1A-215ENST00000540037 F5H697 171 aa10.44□□□□□ -0.74
SCNN1A-215ENST00000540037 KLK9Q2XQG4 91 aa10.44□□□□□ -0.74
SCNN1A-215ENST00000540037 SUMO4Q6EEV6 95 aa10.44□□□□□ -0.74
SCNN1A-215ENST00000540037 ANKRD29Q8N6D5 301 aa10.44□□□□□ -0.74
SCNN1A-215ENST00000540037 KLK9Q9UKQ9 250 aa10.44□□□□□ -0.74
SCNN1A-215ENST00000540037 SCGB1C2P0DMR2 95 aa10.44□□□□□ -0.74
SCNN1A-215ENST00000540037 FAM74A4Q5TZK3 123 aa10.44□□□□□ -0.74
SCNN1A-215ENST00000540037 TRPT1Q86TN4 253 aaKnown RBP10.44□□□□□ -0.74
SCNN1A-215ENST00000540037 TEN1Q86WV5 123 aa10.44□□□□□ -0.74
SCNN1A-215ENST00000540037 CUBNO60494 3623 aa10.44□□□□□ -0.74
SCNN1A-215ENST00000540037 PMVKQ15126 192 aa10.44□□□□□ -0.74
SCNN1A-215ENST00000540037 LENEPQ9Y5L5 61 aa10.44□□□□□ -0.74
SCNN1A-215ENST00000540037 SORL1Q92673 2214 aa10.43□□□□□ -0.74
SCNN1A-215ENST00000540037 BRD3OSQ6XYD6 125 aa10.43□□□□□ -0.74
SCNN1A-215ENST00000540037 AMELXQ99217 191 aa10.43□□□□□ -0.74
SCNN1A-215ENST00000540037 ZNF256Q9Y2P7 627 aaPredicted RBP10.43□□□□□ -0.74
SCNN1A-215ENST00000540037 CSMD2Q7Z408 3487 aa10.43□□□□□ -0.74
SCNN1A-215ENST00000540037 PPDPFLQ8WWR9 84 aa10.43□□□□□ -0.74
SCNN1A-215ENST00000540037 ZNF580Q9UK33 172 aa10.43□□□□□ -0.74
SCNN1A-215ENST00000540037 CELSR2Q9HCU4 2923 aa10.43□□□□□ -0.74
SCNN1A-215ENST00000540037 POLR2KP53803 58 aaKnown RBP10.42□□□□□ -0.74
SCNN1A-215ENST00000540037 FBXL19-AS1Q494R0 122 aa10.42□□□□□ -0.74
SCNN1A-215ENST00000540037 SDHAF1A6NFY7 115 aa10.42□□□□□ -0.74
SCNN1A-215ENST00000540037 C10orf126Q8N4M7 172 aa10.42□□□□□ -0.74
SCNN1A-215ENST00000540037 SLC25A29Q8N8R3 303 aa10.42□□□□□ -0.74
SCNN1A-215ENST00000540037 RNF183Q96D59 192 aa10.42□□□□□ -0.74
SCNN1A-215ENST00000540037 FAM19A4Q96LR4 140 aa10.42□□□□□ -0.74
SCNN1A-215ENST00000540037 BPESC1Q9GZL8 116 aa10.42□□□□□ -0.74
SCNN1A-215ENST00000540037 UBTD1Q9HAC8 227 aa10.42□□□□□ -0.74
SCNN1A-215ENST00000540037 ABCA2Q9BZC7 2435 aa10.42□□□□□ -0.74
SCNN1A-215ENST00000540037 OVOL1O14753 267 aa10.42□□□□□ -0.74
SCNN1A-215ENST00000540037 NPFFO15130 113 aa10.42□□□□□ -0.74
SCNN1A-215ENST00000540037 ELANEP08246 267 aa10.42□□□□□ -0.74
SCNN1A-215ENST00000540037 HERVK_113P61574 105 aa10.42□□□□□ -0.74
SCNN1A-215ENST00000540037 A4D1N5 150 aa10.41□□□□□ -0.74
SCNN1A-215ENST00000540037 A8MWV9 139 aa10.41□□□□□ -0.74
SCNN1A-215ENST00000540037 TRAV12-3A0A0B4J271 114 aa10.41□□□□□ -0.74
SCNN1A-215ENST00000540037 J3QQQ9 107 aa10.41□□□□□ -0.74
SCNN1A-215ENST00000540037 TCF15Q12870 199 aa10.41□□□□□ -0.74
SCNN1A-215ENST00000540037 FOXC1Q12948 553 aa10.4□□□□□ -0.74
SCNN1A-215ENST00000540037 LY6EQ16553 131 aa10.4□□□□□ -0.74
SCNN1A-215ENST00000540037 PRO1854Q9UHT4 67 aa10.4□□□□□ -0.74
SCNN1A-215ENST00000540037 IGKV3-20P01619 116 aa10.4□□□□□ -0.74
SCNN1A-215ENST00000540037 HIVEP3Q5T1R4 2406 aa10.4□□□□□ -0.75
SCNN1A-215ENST00000540037 C9JAW5 83 aa10.39□□□□□ -0.75
SCNN1A-215ENST00000540037 TRAV2A0A0B4J234 112 aa10.39□□□□□ -0.75
SCNN1A-215ENST00000540037 ZNF688P0C7X2 276 aa10.39□□□□□ -0.75
SCNN1A-215ENST00000540037 ZNF876PQ49A33 203 aa10.39□□□□□ -0.75
SCNN1A-215ENST00000540037 C19orf54Q5BKX5 351 aa10.39□□□□□ -0.75
SCNN1A-215ENST00000540037 RHPN1-AS1Q9BWJ2 59 aa10.39□□□□□ -0.75
SCNN1A-215ENST00000540037 TRAV12-2A0A075B6T6 113 aa10.39□□□□□ -0.75
SCNN1A-215ENST00000540037 IGHV4OR15-8A0A075B7B6 117 aa10.39□□□□□ -0.75
SCNN1A-215ENST00000540037 A0A087WW49 117 aa10.39□□□□□ -0.75
SCNN1A-215ENST00000540037 ADARB2-AS1A8MUL3 147 aa10.39□□□□□ -0.75
SCNN1A-215ENST00000540037 K7ENP7 123 aa10.39□□□□□ -0.75
SCNN1A-215ENST00000540037 LMO4P61968 165 aa10.39□□□□□ -0.75
SCNN1A-215ENST00000540037 IGHV1-69DA0A0B4J2H0 117 aa10.38□□□□□ -0.75
SCNN1A-215ENST00000540037 FAM159AQ6UWV7 190 aa10.38□□□□□ -0.75
SCNN1A-215ENST00000540037 SBSPONQ8IVN8 264 aa10.38□□□□□ -0.75
SCNN1A-215ENST00000540037 POM121L12Q8N7R1 296 aa10.38□□□□□ -0.75
SCNN1A-215ENST00000540037 FAM223BA6NKX1 122 aa10.38□□□□□ -0.75
SCNN1A-215ENST00000540037 VCYO14598 125 aa10.38□□□□□ -0.75
SCNN1A-215ENST00000540037 SLC25A20O43772 301 aa10.38□□□□□ -0.75
SCNN1A-215ENST00000540037 LGALS3P17931 250 aaKnown RBP10.38□□□□□ -0.75
SCNN1A-215ENST00000540037 FAM223AQ8IWN6 122 aa10.38□□□□□ -0.75
SCNN1A-215ENST00000540037 MDFICQ9P1T7 246 aa10.38□□□□□ -0.75
SCNN1A-215ENST00000540037 NDUFA4O00483 81 aa10.37□□□□□ -0.75
SCNN1A-215ENST00000540037 BEX4Q9NWD9 120 aaPredicted RBP10.37□□□□□ -0.75
SCNN1A-215ENST00000540037 TRBV20-1A0A075B6N2 111 aa10.37□□□□□ -0.75
SCNN1A-215ENST00000540037 NXPH4O95158 308 aa10.37□□□□□ -0.75
SCNN1A-215ENST00000540037 PPP1R17O96001 155 aa10.37□□□□□ -0.75
SCNN1A-215ENST00000540037 MED14OSP0DP75 135 aa10.37□□□□□ -0.75
SCNN1A-215ENST00000540037 MUSTN1Q8IVN3 82 aa10.37□□□□□ -0.75
SCNN1A-215ENST00000540037 MOB4Q9Y3A3 225 aa10.37□□□□□ -0.75
SCNN1A-215ENST00000540037 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.37□□□□□ -0.75
SCNN1A-215ENST00000540037 PF4V1P10720 104 aa10.36□□□□□ -0.75
SCNN1A-215ENST00000540037 APRG1Q8IVJ8 170 aa10.36□□□□□ -0.75
SCNN1A-215ENST00000540037 PAPPA-AS1Q5QFB9 102 aa10.36□□□□□ -0.75
SCNN1A-215ENST00000540037 LYRM7Q5U5X0 104 aa10.36□□□□□ -0.75
SCNN1A-215ENST00000540037 TIMM17AQ99595 171 aa10.36□□□□□ -0.75
SCNN1A-215ENST00000540037 IGHV3-33P01772 117 aa10.36□□□□□ -0.75
SCNN1A-215ENST00000540037 BLCAPP62952 87 aa10.36□□□□□ -0.75
SCNN1A-215ENST00000540037 ZNF56Q15929 161 aa10.36□□□□□ -0.75
SCNN1A-215ENST00000540037 TMEM141Q96I45 108 aa10.36□□□□□ -0.75
SCNN1A-215ENST00000540037 KLLNB2CW77 178 aa10.35□□□□□ -0.75
SCNN1A-215ENST00000540037 P0DMU3 169 aa10.35□□□□□ -0.75
SCNN1A-215ENST00000540037 FAM231AP0DMU4 169 aa10.35□□□□□ -0.75
SCNN1A-215ENST00000540037 FAM231CP0DMU5 169 aa10.35□□□□□ -0.75
SCNN1A-215ENST00000540037 TMEM263Q8WUH6 116 aaKnown RBP10.35□□□□□ -0.75
SCNN1A-215ENST00000540037 SPG11Q96JI7 2443 aa10.35□□□□□ -0.75
SCNN1A-215ENST00000540037 A0A0J9YXV3 536 aa10.35□□□□□ -0.75
SCNN1A-215ENST00000540037 IGHV4-39P01824 125 aa10.35□□□□□ -0.75
SCNN1A-215ENST00000540037 ERG28Q9UKR5 140 aa10.35□□□□□ -0.75
SCNN1A-215ENST00000540037 TRBV27A0A0K0K1C4 114 aa10.34□□□□□ -0.75
SCNN1A-215ENST00000540037 CRLF1O75462 422 aa10.34□□□□□ -0.75
SCNN1A-215ENST00000540037 ANAPC13Q9BS18 74 aa10.34□□□□□ -0.75
SCNN1A-215ENST00000540037 TMEM223A0PJW6 202 aa10.33□□□□□ -0.75
SCNN1A-215ENST00000540037 Q1RN00 199 aa10.33□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms