RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 FABP5P3A8MUU1 101 aa12.8□□□□□ -0.36
PCDHB17P-201ENST00000539533 SCGB1A1P11684 91 aa12.8□□□□□ -0.36
PCDHB17P-201ENST00000539533 FCER1GP30273 86 aa12.8□□□□□ -0.36
PCDHB17P-201ENST00000539533 TMEM78Q5T7P6 136 aa12.8□□□□□ -0.36
PCDHB17P-201ENST00000539533 C9orf47Q6ZRZ4 202 aa12.8□□□□□ -0.36
PCDHB17P-201ENST00000539533 TNFRSF6BO95407 300 aa12.79□□□□□ -0.36
PCDHB17P-201ENST00000539533 FXYD2P54710 66 aa12.79□□□□□ -0.36
PCDHB17P-201ENST00000539533 ODF1Q14990 250 aa12.79□□□□□ -0.36
PCDHB17P-201ENST00000539533 RAX2Q96IS3 184 aa12.79□□□□□ -0.36
PCDHB17P-201ENST00000539533 NXT2Q9NPJ8 142 aaKnown RBP12.79□□□□□ -0.36
PCDHB17P-201ENST00000539533 F6UB75 175 aa12.79□□□□□ -0.36
PCDHB17P-201ENST00000539533 ZMAT4Q9H898 229 aa12.79□□□□□ -0.36
PCDHB17P-201ENST00000539533 IGKV2D-26A0A0A0MRZ7 120 aa12.78□□□□□ -0.36
PCDHB17P-201ENST00000539533 K7ERJ3 54 aa12.78□□□□□ -0.36
PCDHB17P-201ENST00000539533 EVI2AP22794 236 aa12.78□□□□□ -0.36
PCDHB17P-201ENST00000539533 PSMG4Q5JS54 123 aa12.78□□□□□ -0.36
PCDHB17P-201ENST00000539533 WFDC12Q8WWY7 111 aa12.78□□□□□ -0.36
PCDHB17P-201ENST00000539533 HHLA3Q9XRX5 114 aa12.78□□□□□ -0.36
PCDHB17P-201ENST00000539533 TSSC4Q9Y5U2 329 aaPredicted RBP12.78□□□□□ -0.36
PCDHB17P-201ENST00000539533 NDUFA7O95182 113 aa12.78□□□□□ -0.36
PCDHB17P-201ENST00000539533 LINC01559Q495D7 138 aa12.77□□□□□ -0.36
PCDHB17P-201ENST00000539533 PRSS1P07477 247 aa12.77□□□□□ -0.37
PCDHB17P-201ENST00000539533 GATA1P15976 413 aaPredicted RBP12.77□□□□□ -0.37
PCDHB17P-201ENST00000539533 TTTY13Q9BZ97 58 aa12.77□□□□□ -0.37
PCDHB17P-201ENST00000539533 OVOL1O14753 267 aa12.76□□□□□ -0.37
PCDHB17P-201ENST00000539533 PROK1P58294 105 aa12.76□□□□□ -0.37
PCDHB17P-201ENST00000539533 HIGD1BQ9P298 99 aa12.76□□□□□ -0.37
PCDHB17P-201ENST00000539533 GAGE12HA6NDE8 117 aa12.76□□□□□ -0.37
PCDHB17P-201ENST00000539533 IGKCP01834 107 aa12.76□□□□□ -0.37
PCDHB17P-201ENST00000539533 ID1P41134 155 aa12.76□□□□□ -0.37
PCDHB17P-201ENST00000539533 CD300EQ496F6 205 aaPredicted RBP12.76□□□□□ -0.37
PCDHB17P-201ENST00000539533 OR10J6PQ8NGY7 276 aa12.76□□□□□ -0.37
PCDHB17P-201ENST00000539533 CLUHP3Q96NS8 147 aa12.76□□□□□ -0.37
PCDHB17P-201ENST00000539533 PEMTQ9UBM1 199 aa12.76□□□□□ -0.37
PCDHB17P-201ENST00000539533 A0A1B0GV72 72 aa12.75□□□□□ -0.37
PCDHB17P-201ENST00000539533 CCL24O00175 119 aa12.75□□□□□ -0.37
PCDHB17P-201ENST00000539533 ZNF688P0C7X2 276 aa12.75□□□□□ -0.37
PCDHB17P-201ENST00000539533 TMEM158Q8WZ71 300 aa12.75□□□□□ -0.37
PCDHB17P-201ENST00000539533 CHAC1Q9BUX1 264 aa12.75□□□□□ -0.37
PCDHB17P-201ENST00000539533 K7EQG2 157 aa12.74□□□□□ -0.37
PCDHB17P-201ENST00000539533 CRLF1O75462 422 aa12.74□□□□□ -0.37
PCDHB17P-201ENST00000539533 NHP2Q9NX24 153 aaKnown RBP12.74□□□□□ -0.37
PCDHB17P-201ENST00000539533 WNK1Q9H4A3 2382 aa12.74□□□□□ -0.37
PCDHB17P-201ENST00000539533 FHL3Q13643 280 aa12.74□□□□□ -0.37
PCDHB17P-201ENST00000539533 Q6ZQT7 251 aa12.74□□□□□ -0.37
PCDHB17P-201ENST00000539533 Q8N8P6 123 aa12.74□□□□□ -0.37
PCDHB17P-201ENST00000539533 LINC00477Q96M19 166 aa12.74□□□□□ -0.37
PCDHB17P-201ENST00000539533 WFDC2Q14508 124 aa12.73□□□□□ -0.37
PCDHB17P-201ENST00000539533 SVIPQ8NHG7 77 aa12.73□□□□□ -0.37
PCDHB17P-201ENST00000539533 PHLDA1Q8WV24 401 aaPredicted RBP12.73□□□□□ -0.37
PCDHB17P-201ENST00000539533 NIPBLQ6KC79 2804 aaeCLIP12.73□□□□□ -0.37
PCDHB17P-201ENST00000539533 J3KRW8 73 aa12.73□□□□□ -0.37
PCDHB17P-201ENST00000539533 ATP5LO75964 103 aa12.73□□□□□ -0.37
PCDHB17P-201ENST00000539533 DPM2O94777 84 aa12.73□□□□□ -0.37
PCDHB17P-201ENST00000539533 PRR9Q5T870 116 aa12.73□□□□□ -0.37
PCDHB17P-201ENST00000539533 SPANXB1Q9NS25 103 aaPredicted RBP12.73□□□□□ -0.37
PCDHB17P-201ENST00000539533 SORL1Q92673 2214 aa12.73□□□□□ -0.37
PCDHB17P-201ENST00000539533 BAHCC1Q9P281 2608 aa12.72□□□□□ -0.37
PCDHB17P-201ENST00000539533 IGLV2-18A0A075B6J9 118 aa12.72□□□□□ -0.37
PCDHB17P-201ENST00000539533 IGKV3D-20A0A0C4DH25 116 aa12.72□□□□□ -0.37
PCDHB17P-201ENST00000539533 GTSCR1Q86UQ5 136 aa12.72□□□□□ -0.37
PCDHB17P-201ENST00000539533 F8P00451 2351 aa12.72□□□□□ -0.37
PCDHB17P-201ENST00000539533 C2CD3Q4AC94 2353 aa12.72□□□□□ -0.37
PCDHB17P-201ENST00000539533 J3QR89 54 aa12.72□□□□□ -0.37
PCDHB17P-201ENST00000539533 K7EMI3 77 aa12.72□□□□□ -0.37
PCDHB17P-201ENST00000539533 ZC2HC1BQ5TFG8 222 aa12.72□□□□□ -0.37
PCDHB17P-201ENST00000539533 C11orf21Q9P2W6 132 aa12.72□□□□□ -0.37
PCDHB17P-201ENST00000539533 TRBV25-1A0A075B6N4 114 aa12.71□□□□□ -0.37
PCDHB17P-201ENST00000539533 KRTAP10-3P60369 221 aa12.71□□□□□ -0.37
PCDHB17P-201ENST00000539533 SNRPD3P62318 126 aaKnown RBP12.71□□□□□ -0.37
PCDHB17P-201ENST00000539533 ADARB2-AS1A8MUL3 147 aa12.71□□□□□ -0.38
PCDHB17P-201ENST00000539533 TMEM61Q8N0U2 210 aa12.71□□□□□ -0.38
PCDHB17P-201ENST00000539533 LENEPQ9Y5L5 61 aa12.71□□□□□ -0.38
PCDHB17P-201ENST00000539533 F8W1H4 67 aa12.7□□□□□ -0.38
PCDHB17P-201ENST00000539533 FOXI2Q6ZQN5 318 aa12.7□□□□□ -0.38
PCDHB17P-201ENST00000539533 CEND1Q8N111 149 aa12.7□□□□□ -0.38
PCDHB17P-201ENST00000539533 ZFAND2AQ8N6M9 145 aa12.7□□□□□ -0.38
PCDHB17P-201ENST00000539533 NSUN5P1Q3KNT7 163 aa12.7□□□□□ -0.38
PCDHB17P-201ENST00000539533 SH2D6Q7Z4S9 175 aa12.7□□□□□ -0.38
PCDHB17P-201ENST00000539533 IGLL5B9A064 214 aa12.69□□□□□ -0.38
PCDHB17P-201ENST00000539533 E9PLD3 99 aa12.69□□□□□ -0.38
PCDHB17P-201ENST00000539533 HLA-DRB4P13762 266 aa12.69□□□□□ -0.38
PCDHB17P-201ENST00000539533 DEFB114Q30KQ6 69 aa12.69□□□□□ -0.38
PCDHB17P-201ENST00000539533 DYNLRB2Q8TF09 96 aa12.69□□□□□ -0.38
PCDHB17P-201ENST00000539533 FAM19A4Q96LR4 140 aa12.69□□□□□ -0.38
PCDHB17P-201ENST00000539533 SPAG8Q99932 426 aaPredicted RBP12.69□□□□□ -0.38
PCDHB17P-201ENST00000539533 SPATA25Q9BR10 227 aa12.69□□□□□ -0.38
PCDHB17P-201ENST00000539533 HLA-DRB4X5D2U9 266 aa12.69□□□□□ -0.38
PCDHB17P-201ENST00000539533 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.69□□□□□ -0.38
PCDHB17P-201ENST00000539533 NRACQ8N912 160 aa12.69□□□□□ -0.38
PCDHB17P-201ENST00000539533 TM2D2Q9BX73 214 aa12.69□□□□□ -0.38
PCDHB17P-201ENST00000539533 MRPL35Q9NZE8 188 aaKnown RBP12.69□□□□□ -0.38
PCDHB17P-201ENST00000539533 LAGE3Q14657 143 aa12.68□□□□□ -0.38
PCDHB17P-201ENST00000539533 ETDBQ3ZM63 59 aa12.68□□□□□ -0.38
PCDHB17P-201ENST00000539533 TRAV26-2A0A0B4J265 109 aa12.67□□□□□ -0.38
PCDHB17P-201ENST00000539533 PRSS47A8MTI9 375 aa12.67□□□□□ -0.38
PCDHB17P-201ENST00000539533 H3BMG7 143 aa12.67□□□□□ -0.38
PCDHB17P-201ENST00000539533 ZNF479Q96JC4 524 aa12.67□□□□□ -0.38
PCDHB17P-201ENST00000539533 AGRNO00468 2067 aa12.67□□□□□ -0.38
PCDHB17P-201ENST00000539533 A0A0J9YX75 114 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms