RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 TRAV12-1A0A0B4J245 112 aa6.88□□□□□ -1.31
DDB1-211ENST00000538280 A8MTW9 85 aa6.88□□□□□ -1.31
DDB1-211ENST00000538280 PPP1R17O96001 155 aa6.88□□□□□ -1.31
DDB1-211ENST00000538280 IGKCP01834 107 aa6.88□□□□□ -1.31
DDB1-211ENST00000538280 SUMO2P61956 95 aaKnown RBP6.88□□□□□ -1.31
DDB1-211ENST00000538280 ORMDL2Q53FV1 153 aa6.88□□□□□ -1.31
DDB1-211ENST00000538280 TMEM97Q5BJF2 176 aa6.88□□□□□ -1.31
DDB1-211ENST00000538280 WFDC3Q8IUB2 231 aa6.88□□□□□ -1.31
DDB1-211ENST00000538280 C9orf85Q96MD7 179 aa6.88□□□□□ -1.31
DDB1-211ENST00000538280 IGKV3-7A0A075B6H7 116 aa6.87□□□□□ -1.31
DDB1-211ENST00000538280 A0A087WX48 190 aa6.87□□□□□ -1.31
DDB1-211ENST00000538280 CBY3A6NI87 242 aa6.87□□□□□ -1.31
DDB1-211ENST00000538280 DPM2O94777 84 aa6.87□□□□□ -1.31
DDB1-211ENST00000538280 SEC11AP67812 179 aa6.87□□□□□ -1.31
DDB1-211ENST00000538280 HSD52Q0P140 79 aa6.87□□□□□ -1.31
DDB1-211ENST00000538280 UBE2V1Q13404 147 aa6.87□□□□□ -1.31
DDB1-211ENST00000538280 FAM159AQ6UWV7 190 aa6.87□□□□□ -1.31
DDB1-211ENST00000538280 ADAMTSL5Q6ZMM2 481 aa6.87□□□□□ -1.31
DDB1-211ENST00000538280 Q6ZVH6 145 aa6.87□□□□□ -1.31
DDB1-211ENST00000538280 C14orf178Q8N769 122 aaPredicted RBP6.87□□□□□ -1.31
DDB1-211ENST00000538280 TOMM6Q96B49 74 aa6.87□□□□□ -1.31
DDB1-211ENST00000538280 HIGD1BQ9P298 99 aa6.87□□□□□ -1.31
DDB1-211ENST00000538280 TRAV2A0A0B4J234 112 aa6.86□□□□□ -1.31
DDB1-211ENST00000538280 IGHV3-16A0A0C4DH30 117 aa6.86□□□□□ -1.31
DDB1-211ENST00000538280 HOXA3O43365 443 aaPredicted RBP6.86□□□□□ -1.31
DDB1-211ENST00000538280 SPRY2O43597 315 aa6.86□□□□□ -1.31
DDB1-211ENST00000538280 DUSP14O95147 198 aaKnown RBP6.86□□□□□ -1.31
DDB1-211ENST00000538280 PRSS1P07477 247 aa6.86□□□□□ -1.31
DDB1-211ENST00000538280 ZNF688P0C7X2 276 aa6.86□□□□□ -1.31
DDB1-211ENST00000538280 HOXD3P31249 432 aaPredicted RBP6.86□□□□□ -1.31
DDB1-211ENST00000538280 AMTNQ6UX39 209 aa6.86□□□□□ -1.31
DDB1-211ENST00000538280 RPL39LQ96EH5 51 aaKnown RBP6.86□□□□□ -1.31
DDB1-211ENST00000538280 SELENOKQ9Y6D0 94 aa6.86□□□□□ -1.31
DDB1-211ENST00000538280 IGKV2D-26A0A0A0MRZ7 120 aa6.85□□□□□ -1.31
DDB1-211ENST00000538280 TRBV6-5A0A0K0K1A5 114 aa6.85□□□□□ -1.31
DDB1-211ENST00000538280 CCL25O15444 150 aa6.85□□□□□ -1.31
DDB1-211ENST00000538280 POLR2KP53803 58 aaKnown RBP6.85□□□□□ -1.31
DDB1-211ENST00000538280 SYNJ2BPP57105 145 aa6.85□□□□□ -1.31
DDB1-211ENST00000538280 SNRPD3P62318 126 aaKnown RBP6.85□□□□□ -1.31
DDB1-211ENST00000538280 FOXI2Q6ZQN5 318 aa6.85□□□□□ -1.31
DDB1-211ENST00000538280 PCP2Q8IVA1 136 aa6.85□□□□□ -1.31
DDB1-211ENST00000538280 TMEM86BQ8N661 226 aa6.85□□□□□ -1.31
DDB1-211ENST00000538280 NEXN-AS1Q8NBZ9 246 aa6.85□□□□□ -1.31
DDB1-211ENST00000538280 MRPL35Q9NZE8 188 aaKnown RBP6.85□□□□□ -1.31
DDB1-211ENST00000538280 TRAV12-3A0A0B4J271 114 aa6.84□□□□□ -1.31
DDB1-211ENST00000538280 LINC01549A6NIU2 74 aa6.84□□□□□ -1.31
DDB1-211ENST00000538280 F8VRH5 84 aa6.84□□□□□ -1.31
DDB1-211ENST00000538280 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.84□□□□□ -1.31
DDB1-211ENST00000538280 MGPP08493 103 aa6.84□□□□□ -1.31
DDB1-211ENST00000538280 PLNP26678 52 aa6.84□□□□□ -1.31
DDB1-211ENST00000538280 CDKN1BP46527 198 aa6.84□□□□□ -1.31
DDB1-211ENST00000538280 NMUP48645 174 aa6.84□□□□□ -1.31
DDB1-211ENST00000538280 ZC2HC1BQ5TFG8 222 aa6.84□□□□□ -1.31
DDB1-211ENST00000538280 SUMO4Q6EEV6 95 aa6.84□□□□□ -1.31
DDB1-211ENST00000538280 PKD1L1Q8TDX9 2849 aa6.84□□□□□ -1.31
DDB1-211ENST00000538280 TGP01266 2768 aa6.83□□□□□ -1.32
DDB1-211ENST00000538280 IGHV1OR15-1A0A075B7D0 117 aa6.83□□□□□ -1.32
DDB1-211ENST00000538280 H3BRM9 83 aa6.83□□□□□ -1.32
DDB1-211ENST00000538280 H7C1H1 209 aa6.83□□□□□ -1.32
DDB1-211ENST00000538280 CD7P09564 240 aa6.83□□□□□ -1.32
DDB1-211ENST00000538280 SCGB3A1Q96QR1 104 aa6.83□□□□□ -1.32
DDB1-211ENST00000538280 EDA2RQ9HAV5 297 aa6.83□□□□□ -1.32
DDB1-211ENST00000538280 ZNF256Q9Y2P7 627 aaPredicted RBP6.83□□□□□ -1.32
DDB1-211ENST00000538280 MGAM2Q2M2H8 2515 aa6.83□□□□□ -1.32
DDB1-211ENST00000538280 MUC4Q99102 2169 aa6.82□□□□□ -1.32
DDB1-211ENST00000538280 A6NDN8 102 aa6.82□□□□□ -1.32
DDB1-211ENST00000538280 LINC01619G3V211 115 aa6.82□□□□□ -1.32
DDB1-211ENST00000538280 PTTG1IPP53801 180 aa6.82□□□□□ -1.32
DDB1-211ENST00000538280 TCTEX1D4Q5JR98 221 aa6.82□□□□□ -1.32
DDB1-211ENST00000538280 C2orf66Q6UXQ4 117 aa6.82□□□□□ -1.32
DDB1-211ENST00000538280 ERASQ7Z444 233 aa6.82□□□□□ -1.32
DDB1-211ENST00000538280 GTSCR1Q86UQ5 136 aa6.82□□□□□ -1.32
DDB1-211ENST00000538280 TEX29Q8N6K0 151 aa6.82□□□□□ -1.32
DDB1-211ENST00000538280 SYT8Q8NBV8 401 aa6.82□□□□□ -1.32
DDB1-211ENST00000538280 C4orf3Q8WVX3 66 aa6.82□□□□□ -1.32
DDB1-211ENST00000538280 BAALCQ8WXS3 180 aa6.82□□□□□ -1.32
DDB1-211ENST00000538280 JMJD8Q96S16 334 aa6.82□□□□□ -1.32
DDB1-211ENST00000538280 CSTL1Q9H114 145 aa6.82□□□□□ -1.32
DDB1-211ENST00000538280 JPT2Q9H910 190 aa6.82□□□□□ -1.32
DDB1-211ENST00000538280 TRGV11A0A075B6L2 103 aa6.81□□□□□ -1.32
DDB1-211ENST00000538280 TRBV27A0A0K0K1C4 114 aa6.81□□□□□ -1.32
DDB1-211ENST00000538280 K7EP13 123 aa6.81□□□□□ -1.32
DDB1-211ENST00000538280 CRYGDP07320 174 aa6.81□□□□□ -1.32
DDB1-211ENST00000538280 SLURP1P55000 103 aa6.81□□□□□ -1.32
DDB1-211ENST00000538280 TAL2Q16559 108 aa6.81□□□□□ -1.32
DDB1-211ENST00000538280 SPINK13Q1W4C9 94 aa6.81□□□□□ -1.32
DDB1-211ENST00000538280 MORN3Q6PF18 240 aaPredicted RBP6.81□□□□□ -1.32
DDB1-211ENST00000538280 ZFP2Q6ZN57 461 aa6.81□□□□□ -1.32
DDB1-211ENST00000538280 C18orf65Q6ZTR6 163 aa6.81□□□□□ -1.32
DDB1-211ENST00000538280 Q8N1Y9 231 aa6.81□□□□□ -1.32
DDB1-211ENST00000538280 WFDC12Q8WWY7 111 aa6.81□□□□□ -1.32
DDB1-211ENST00000538280 DUX5Q96PT3 197 aa6.81□□□□□ -1.32
DDB1-211ENST00000538280 CHAC1Q9BUX1 264 aa6.81□□□□□ -1.32
DDB1-211ENST00000538280 MDFICQ9P1T7 246 aa6.81□□□□□ -1.32
DDB1-211ENST00000538280 CHTOPQ9Y3Y2 248 aaKnown RBP6.81□□□□□ -1.32
DDB1-211ENST00000538280 TRBV25-1A0A075B6N4 114 aa6.8□□□□□ -1.32
DDB1-211ENST00000538280 TRAV12-2A0A075B6T6 113 aa6.8□□□□□ -1.32
DDB1-211ENST00000538280 TRAV8-6A0A0B4J262 113 aa6.8□□□□□ -1.32
DDB1-211ENST00000538280 C9orf118A6NHY6 69 aa6.8□□□□□ -1.32
DDB1-211ENST00000538280 IGIPA6NJ69 53 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms