RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 STPG4Q8N801 248 aa3.17□□□□□ -1.9
SNHG1-208ENST00000538266 OR10J6PQ8NGY7 276 aa3.17□□□□□ -1.9
SNHG1-208ENST00000538266 FXYD5Q96DB9 178 aa3.17□□□□□ -1.9
SNHG1-208ENST00000538266 C17orf77Q96MU5 243 aa3.17□□□□□ -1.9
SNHG1-208ENST00000538266 WFDC10AQ9H1F0 79 aa3.17□□□□□ -1.9
SNHG1-208ENST00000538266 Q9H3A6 140 aa3.17□□□□□ -1.9
SNHG1-208ENST00000538266 ST20Q9HBF5 79 aa3.17□□□□□ -1.9
SNHG1-208ENST00000538266 MGAM2Q2M2H8 2515 aa3.16□□□□□ -1.9
SNHG1-208ENST00000538266 TRAV8-2A0A0B4J237 113 aa3.16□□□□□ -1.9
SNHG1-208ENST00000538266 TRAV34A0A0B4J273 112 aa3.16□□□□□ -1.9
SNHG1-208ENST00000538266 A0A1B0GXF2 115 aa3.16□□□□□ -1.9
SNHG1-208ENST00000538266 KNCNA6PVL3 124 aa3.16□□□□□ -1.9
SNHG1-208ENST00000538266 A8MZ25 164 aa3.16□□□□□ -1.9
SNHG1-208ENST00000538266 HSBP1L1C9JCN9 74 aa3.16□□□□□ -1.9
SNHG1-208ENST00000538266 K7EP13 123 aa3.16□□□□□ -1.9
SNHG1-208ENST00000538266 K7EQM0 130 aa3.16□□□□□ -1.9
SNHG1-208ENST00000538266 DUSP14O95147 198 aaKnown RBP3.16□□□□□ -1.9
SNHG1-208ENST00000538266 IGKV3-20P01619 116 aa3.16□□□□□ -1.9
SNHG1-208ENST00000538266 SLC25A5P05141 298 aaKnown RBP3.16□□□□□ -1.9
SNHG1-208ENST00000538266 HLA-DRB4P13762 266 aa3.16□□□□□ -1.9
SNHG1-208ENST00000538266 HINT1P49773 126 aaPredicted RBP3.16□□□□□ -1.9
SNHG1-208ENST00000538266 RPS20P60866 119 aaKnown RBP3.16□□□□□ -1.9
SNHG1-208ENST00000538266 HBBP68871 147 aa3.16□□□□□ -1.9
SNHG1-208ENST00000538266 SLAQ13239 276 aa3.16□□□□□ -1.9
SNHG1-208ENST00000538266 UBE2V1Q13404 147 aa3.16□□□□□ -1.9
SNHG1-208ENST00000538266 COTL1Q14019 142 aa3.16□□□□□ -1.9
SNHG1-208ENST00000538266 PAPPA-AS1Q5QFB9 102 aa3.16□□□□□ -1.9
SNHG1-208ENST00000538266 EXOC3-AS1Q8N2X6 119 aa3.16□□□□□ -1.9
SNHG1-208ENST00000538266 FAM19A2Q8N3H0 131 aa3.16□□□□□ -1.9
SNHG1-208ENST00000538266 ARL6IP6Q8N6S5 226 aa3.16□□□□□ -1.9
SNHG1-208ENST00000538266 C5orf17Q8NAS9 161 aa3.16□□□□□ -1.9
SNHG1-208ENST00000538266 OR4C5Q8NGB2 326 aa3.16□□□□□ -1.9
SNHG1-208ENST00000538266 CHCHD1Q96BP2 118 aaKnown RBP3.16□□□□□ -1.9
SNHG1-208ENST00000538266 MRPL53Q96EL3 112 aaKnown RBP3.16□□□□□ -1.9
SNHG1-208ENST00000538266 ALKBH7Q9BT30 221 aaPredicted RBP3.16□□□□□ -1.9
SNHG1-208ENST00000538266 TMEM70Q9BUB7 260 aa3.16□□□□□ -1.9
SNHG1-208ENST00000538266 C1QTNF4Q9BXJ3 329 aa3.16□□□□□ -1.9
SNHG1-208ENST00000538266 KRTAP17-1Q9BYP8 105 aa3.16□□□□□ -1.9
SNHG1-208ENST00000538266 RPP21Q9H633 154 aaKnown RBP3.16□□□□□ -1.9
SNHG1-208ENST00000538266 OTORQ9NRC9 128 aa3.16□□□□□ -1.9
SNHG1-208ENST00000538266 ZNF492Q9P255 531 aa3.16□□□□□ -1.9
SNHG1-208ENST00000538266 RPH3ALQ9UNE2 315 aa3.16□□□□□ -1.9
SNHG1-208ENST00000538266 HLA-DRB4X5D2U9 266 aa3.16□□□□□ -1.9
SNHG1-208ENST00000538266 A0A0J9YX75 114 aa3.15□□□□□ -1.91
SNHG1-208ENST00000538266 RBMY1BA6NDE4 496 aaKnown RBP3.15□□□□□ -1.91
SNHG1-208ENST00000538266 PGPA6NDG6 321 aa3.15□□□□□ -1.91
SNHG1-208ENST00000538266 RBMY1EA6NEQ0 496 aaKnown RBP3.15□□□□□ -1.91
SNHG1-208ENST00000538266 A8MWL6 223 aa3.15□□□□□ -1.91
SNHG1-208ENST00000538266 F6UB75 175 aa3.15□□□□□ -1.91
SNHG1-208ENST00000538266 H3BMM0 161 aa3.15□□□□□ -1.91
SNHG1-208ENST00000538266 M0R3E3 92 aa3.15□□□□□ -1.91
SNHG1-208ENST00000538266 CA1P00915 261 aaPredicted RBP3.15□□□□□ -1.91
SNHG1-208ENST00000538266 OR5AL1P0C617 328 aa3.15□□□□□ -1.91
SNHG1-208ENST00000538266 RBMY1DP0C7P1 496 aaKnown RBP3.15□□□□□ -1.91
SNHG1-208ENST00000538266 HLA-DMBP28068 263 aa3.15□□□□□ -1.91
SNHG1-208ENST00000538266 CDKN1BP46527 198 aa3.15□□□□□ -1.91
SNHG1-208ENST00000538266 SAPCD1Q5SSQ6 148 aa3.15□□□□□ -1.91
SNHG1-208ENST00000538266 TMEM78Q5T7P6 136 aa3.15□□□□□ -1.91
SNHG1-208ENST00000538266 GDF5OSQ5U4N7 250 aa3.15□□□□□ -1.91
SNHG1-208ENST00000538266 MORN3Q6PF18 240 aaPredicted RBP3.15□□□□□ -1.91
SNHG1-208ENST00000538266 SLC25A34Q6PIV7 304 aa3.15□□□□□ -1.91
SNHG1-208ENST00000538266 PET117Q6UWS5 81 aa3.15□□□□□ -1.91
SNHG1-208ENST00000538266 TRPT1Q86TN4 253 aaKnown RBP3.15□□□□□ -1.91
SNHG1-208ENST00000538266 ATOH7Q8N100 152 aa3.15□□□□□ -1.91
SNHG1-208ENST00000538266 NHLRC2Q8NBF2 726 aa3.15□□□□□ -1.91
SNHG1-208ENST00000538266 NUP35Q8NFH5 326 aa3.15□□□□□ -1.91
SNHG1-208ENST00000538266 OR8A1Q8NGG7 326 aa3.15□□□□□ -1.91
SNHG1-208ENST00000538266 KIR2DL5BQ8NHK3 375 aa3.15□□□□□ -1.91
SNHG1-208ENST00000538266 FMC1Q96HJ9 113 aa3.15□□□□□ -1.91
SNHG1-208ENST00000538266 B9D2Q9BPU9 175 aa3.15□□□□□ -1.91
SNHG1-208ENST00000538266 PMCHL2Q9BQD1 86 aa3.15□□□□□ -1.91
SNHG1-208ENST00000538266 GFRA4Q9GZZ7 299 aa3.15□□□□□ -1.91
SNHG1-208ENST00000538266 TMEM191AQ9H0A3 160 aa3.15□□□□□ -1.91
SNHG1-208ENST00000538266 CSTL1Q9H114 145 aa3.15□□□□□ -1.91
SNHG1-208ENST00000538266 IGKV2-40A0A087WW87 121 aaPredicted RBP3.14□□□□□ -1.91
SNHG1-208ENST00000538266 IGHV1-24A0A0C4DH33 117 aa3.14□□□□□ -1.91
SNHG1-208ENST00000538266 A0A1B0GW15 77 aa3.14□□□□□ -1.91
SNHG1-208ENST00000538266 SERTM2A0A1B0GWG4 89 aa3.14□□□□□ -1.91
SNHG1-208ENST00000538266 RBAKDNA6NC62 111 aa3.14□□□□□ -1.91
SNHG1-208ENST00000538266 FAM231BA6NCW3 169 aa3.14□□□□□ -1.91
SNHG1-208ENST00000538266 HIGD1CA8MV81 97 aa3.14□□□□□ -1.91
SNHG1-208ENST00000538266 SYS1-DBNDD2H3BUS1 97 aa3.14□□□□□ -1.91
SNHG1-208ENST00000538266 CCL25O15444 150 aa3.14□□□□□ -1.91
SNHG1-208ENST00000538266 CRXO43186 299 aaPredicted RBP3.14□□□□□ -1.91
SNHG1-208ENST00000538266 IGKV2D-40P01614 121 aaPredicted RBP3.14□□□□□ -1.91
SNHG1-208ENST00000538266 P01737 135 aa3.14□□□□□ -1.91
SNHG1-208ENST00000538266 PRB4P10163 310 aaPredicted RBP3.14□□□□□ -1.91
SNHG1-208ENST00000538266 LEPP41159 167 aa3.14□□□□□ -1.91
SNHG1-208ENST00000538266 DEFB1P60022 68 aa3.14□□□□□ -1.91
SNHG1-208ENST00000538266 RBX1P62877 108 aa3.14□□□□□ -1.91
SNHG1-208ENST00000538266 VAMP3Q15836 100 aa3.14□□□□□ -1.91
SNHG1-208ENST00000538266 SPINK13Q1W4C9 94 aa3.14□□□□□ -1.91
SNHG1-208ENST00000538266 DEFB135Q30KP9 77 aa3.14□□□□□ -1.91
SNHG1-208ENST00000538266 PRR27Q6MZM9 219 aa3.14□□□□□ -1.91
SNHG1-208ENST00000538266 GOLT1AQ6ZVE7 132 aa3.14□□□□□ -1.91
SNHG1-208ENST00000538266 SMIM15Q7Z3B0 74 aa3.14□□□□□ -1.91
SNHG1-208ENST00000538266 Q86TA4 180 aa3.14□□□□□ -1.91
SNHG1-208ENST00000538266 SBSPONQ8IVN8 264 aa3.14□□□□□ -1.91
SNHG1-208ENST00000538266 NDFIP1Q9BT67 221 aa3.14□□□□□ -1.91
SNHG1-208ENST00000538266 XCL2Q9UBD3 114 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms