RNA–Protein interactions for RNA: ENST00000537642.1

USP28-204, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 732 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-204ENST00000537642 CRYGDP07320 174 aa10□□□□□ -0.81
USP28-204ENST00000537642 CXCL1P09341 107 aa10□□□□□ -0.81
USP28-204ENST00000537642 KRTAP10-2P60368 255 aa10□□□□□ -0.81
USP28-204ENST00000537642 GAGE1Q13065 139 aa10□□□□□ -0.81
USP28-204ENST00000537642 GAGE4Q13068 117 aa10□□□□□ -0.81
USP28-204ENST00000537642 GAGE5Q13069 117 aa10□□□□□ -0.81
USP28-204ENST00000537642 GAGE13Q4V321 117 aa10□□□□□ -0.81
USP28-204ENST00000537642 LELP1Q5T871 98 aa10□□□□□ -0.81
USP28-204ENST00000537642 FAM74A4Q5TZK3 123 aa10□□□□□ -0.81
USP28-204ENST00000537642 PRR27Q6MZM9 219 aa10□□□□□ -0.81
USP28-204ENST00000537642 NFE4Q86UQ8 179 aa10□□□□□ -0.81
USP28-204ENST00000537642 MSRB1Q9NZV6 116 aa10□□□□□ -0.81
USP28-204ENST00000537642 TRAV8-6A0A0B4J262 113 aa9.99□□□□□ -0.81
USP28-204ENST00000537642 IGLV2-8P01709 118 aa9.99□□□□□ -0.81
USP28-204ENST00000537642 MEF2BQ02080 365 aaPredicted RBP9.99□□□□□ -0.81
USP28-204ENST00000537642 CENPWQ5EE01 88 aa9.99□□□□□ -0.81
USP28-204ENST00000537642 LINC01556Q5JQF7 62 aa9.99□□□□□ -0.81
USP28-204ENST00000537642 OR10J3Q5JRS4 329 aa9.99□□□□□ -0.81
USP28-204ENST00000537642 RAB19A4D1S5 217 aa9.98□□□□□ -0.81
USP28-204ENST00000537642 SNAI2O43623 268 aa9.98□□□□□ -0.81
USP28-204ENST00000537642 IFNA1P01562 189 aa9.98□□□□□ -0.81
USP28-204ENST00000537642 BCL2P10415 239 aa9.98□□□□□ -0.81
USP28-204ENST00000537642 C10orf126Q8N4M7 172 aa9.98□□□□□ -0.81
USP28-204ENST00000537642 OR10AG1Q8NH19 301 aa9.98□□□□□ -0.81
USP28-204ENST00000537642 PDE6DO43924 150 aa9.97□□□□□ -0.81
USP28-204ENST00000537642 SSBP4Q9BWG4 385 aaPredicted RBP9.97□□□□□ -0.81
USP28-204ENST00000537642 MUC21A0A0G2JKD1 596 aa9.96□□□□□ -0.82
USP28-204ENST00000537642 MUC21A0A140T8X8 626 aa9.96□□□□□ -0.82
USP28-204ENST00000537642 OR5AL1P0C617 328 aa9.96□□□□□ -0.82
USP28-204ENST00000537642 MED9Q9NWA0 146 aa9.96□□□□□ -0.82
USP28-204ENST00000537642 VAX2Q9UIW0 290 aa9.96□□□□□ -0.82
USP28-204ENST00000537642 BOLA1Q9Y3E2 137 aa9.96□□□□□ -0.82
USP28-204ENST00000537642 TRBV20OR9-2A0A075B6H5 130 aa9.95□□□□□ -0.82
USP28-204ENST00000537642 A0A1B0GVG6 124 aa9.95□□□□□ -0.82
USP28-204ENST00000537642 C19orf71A6NCJ1 209 aa9.95□□□□□ -0.82
USP28-204ENST00000537642 IBA57-AS1B1ANH7 110 aa9.95□□□□□ -0.82
USP28-204ENST00000537642 IGHV3-30P01768 117 aa9.95□□□□□ -0.82
USP28-204ENST00000537642 IGHV3-33P01772 117 aa9.95□□□□□ -0.82
USP28-204ENST00000537642 IGHV3-30-3P0DP02 117 aa9.95□□□□□ -0.82
USP28-204ENST00000537642 IGHV3-30-5P0DP03 117 aa9.95□□□□□ -0.82
USP28-204ENST00000537642 GNG4P50150 75 aa9.95□□□□□ -0.82
USP28-204ENST00000537642 ERVFC1-1P60608 527 aa9.95□□□□□ -0.82
USP28-204ENST00000537642 SMIM12Q96EX1 92 aa9.95□□□□□ -0.82
USP28-204ENST00000537642 ALKAL2Q6UX46 152 aa9.94□□□□□ -0.82
USP28-204ENST00000537642 Q8N3U1 123 aa9.94□□□□□ -0.82
USP28-204ENST00000537642 A0A087WTM6 91 aa9.93□□□□□ -0.82
USP28-204ENST00000537642 TRBV10-1A0A0K0K1A3 114 aa9.93□□□□□ -0.82
USP28-204ENST00000537642 GZMBP10144 247 aa9.93□□□□□ -0.82
USP28-204ENST00000537642 FUSP35637 526 aaKnown RBP eCLIP9.93□□□□□ -0.82
USP28-204ENST00000537642 TAGLN2P37802 199 aaKnown RBP9.93□□□□□ -0.82
USP28-204ENST00000537642 RAB4BP61018 213 aa9.93□□□□□ -0.82
USP28-204ENST00000537642 SSTP61278 116 aa9.93□□□□□ -0.82
USP28-204ENST00000537642 SPANXN1Q5VSR9 72 aa9.93□□□□□ -0.82
USP28-204ENST00000537642 OR2D3Q8NGH3 330 aa9.93□□□□□ -0.82
USP28-204ENST00000537642 DAZAP1Q96EP5 407 aaKnown RBP9.93□□□□□ -0.82
USP28-204ENST00000537642 PCLOQ9Y6V0 5065 aa9.92□□□□□ -0.82
USP28-204ENST00000537642 A0A087WWC5 75 aa9.92□□□□□ -0.82
USP28-204ENST00000537642 RBFOX3A6NFN3 312 aa9.92□□□□□ -0.82
USP28-204ENST00000537642 EREGO14944 169 aa9.92□□□□□ -0.82
USP28-204ENST00000537642 CDK2AP2O75956 126 aa9.92□□□□□ -0.82
USP28-204ENST00000537642 IGLC6P0CF74 106 aa9.92□□□□□ -0.82
USP28-204ENST00000537642 NKX2-5P52952 324 aaPredicted RBP9.92□□□□□ -0.82
USP28-204ENST00000537642 RPS20P60866 119 aaKnown RBP9.91□□□□□ -0.82
USP28-204ENST00000537642 UBE2D3P61077 147 aa9.91□□□□□ -0.82
USP28-204ENST00000537642 UBE2D2P62837 147 aa9.91□□□□□ -0.82
USP28-204ENST00000537642 BLOC1S1P78537 153 aa9.91□□□□□ -0.82
USP28-204ENST00000537642 RPL36AP83881 106 aaKnown RBP9.91□□□□□ -0.82
USP28-204ENST00000537642 ZNF56Q15929 161 aa9.91□□□□□ -0.82
USP28-204ENST00000537642 OR10G8Q8NGN5 311 aa9.91□□□□□ -0.82
USP28-204ENST00000537642 RPL36ALQ969Q0 106 aaKnown RBP9.91□□□□□ -0.82
USP28-204ENST00000537642 Q9HAA7 133 aa9.91□□□□□ -0.82
USP28-204ENST00000537642 PGPEP1Q9NXJ5 209 aa9.91□□□□□ -0.82
USP28-204ENST00000537642 KIF25-AS1Q9Y6Z4 181 aa9.91□□□□□ -0.82
USP28-204ENST00000537642 TRBV7-3A0A075B6L6 115 aa9.9□□□□□ -0.82
USP28-204ENST00000537642 P01737 135 aa9.9□□□□□ -0.82
USP28-204ENST00000537642 LAGE3Q14657 143 aa9.9□□□□□ -0.82
USP28-204ENST00000537642 FER1L6-AS1Q8NA97 138 aa9.9□□□□□ -0.82
USP28-204ENST00000537642 NEXN-AS1Q8NBZ9 246 aa9.9□□□□□ -0.82
USP28-204ENST00000537642 LYPD6BQ8NI32 183 aa9.9□□□□□ -0.82
USP28-204ENST00000537642 TPPP3Q9BW30 176 aa9.9□□□□□ -0.82
USP28-204ENST00000537642 KRTAP17-1Q9BYP8 105 aa9.9□□□□□ -0.82
USP28-204ENST00000537642 LRCOL1A6NCL2 159 aa9.89□□□□□ -0.83
USP28-204ENST00000537642 DAZ4Q86SG3 579 aaKnown RBP9.89□□□□□ -0.83
USP28-204ENST00000537642 AP1S3Q96PC3 154 aa9.89□□□□□ -0.83
USP28-204ENST00000537642 BIN3Q9NQY0 253 aa9.89□□□□□ -0.83
USP28-204ENST00000537642 DAZ3Q9NR90 486 aaKnown RBP9.89□□□□□ -0.83
USP28-204ENST00000537642 ABCA13Q86UQ4 5058 aa9.89□□□□□ -0.83
USP28-204ENST00000537642 F5H697 171 aa9.88□□□□□ -0.83
USP28-204ENST00000537642 K7EN84 100 aa9.88□□□□□ -0.83
USP28-204ENST00000537642 PSCAO43653 123 aa9.88□□□□□ -0.83
USP28-204ENST00000537642 CDPF1Q6NVV7 123 aa9.88□□□□□ -0.83
USP28-204ENST00000537642 NIT1Q86X76 327 aa9.88□□□□□ -0.83
USP28-204ENST00000537642 NUDT10Q8NFP7 164 aa9.88□□□□□ -0.83
USP28-204ENST00000537642 OCC1Q8TAD7 63 aa9.88□□□□□ -0.83
USP28-204ENST00000537642 NUDT11Q96G61 164 aa9.88□□□□□ -0.83
USP28-204ENST00000537642 XKRY2A2RUG3 117 aa9.87□□□□□ -0.83
USP28-204ENST00000537642 SMIM17P0DL12 118 aa9.87□□□□□ -0.83
USP28-204ENST00000537642 CACNG7P62955 275 aa9.87□□□□□ -0.83
USP28-204ENST00000537642 DNAH8Q96JB1 4490 aa9.86□□□□□ -0.83
USP28-204ENST00000537642 F2Z2F3 143 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms