RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 A0A1B0GX51 115 aa-0.24□□□□□ -2.45
CCDC7-208ENST00000537047 CCDC179H3BU77 68 aa-0.24□□□□□ -2.45
CCDC7-208ENST00000537047 MT-ND4LP03901 98 aa-0.24□□□□□ -2.45
CCDC7-208ENST00000537047 TFF1P04155 84 aa-0.24□□□□□ -2.45
CCDC7-208ENST00000537047 APODP05090 189 aa-0.24□□□□□ -2.45
CCDC7-208ENST00000537047 TMEM244Q5VVB8 128 aa-0.24□□□□□ -2.45
CCDC7-208ENST00000537047 SNX29P2Q8IUI4 249 aa-0.24□□□□□ -2.45
CCDC7-208ENST00000537047 BANF2Q9H503 90 aa-0.24□□□□□ -2.45
CCDC7-208ENST00000537047 TMEM242Q9NWH2 141 aa-0.24□□□□□ -2.45
CCDC7-208ENST00000537047 GINS2Q9Y248 185 aa-0.24□□□□□ -2.45
CCDC7-208ENST00000537047 EP300Q09472 2414 aaPredicted RBP-0.24□□□□□ -2.45
CCDC7-208ENST00000537047 NBEAL2Q6ZNJ1 2754 aa-0.24□□□□□ -2.45
CCDC7-208ENST00000537047 VIRMAQ69YN4 1812 aaKnown RBP-0.24□□□□□ -2.45
CCDC7-208ENST00000537047 ABCA1O95477 2261 aa-0.25□□□□□ -2.45
CCDC7-208ENST00000537047 SETD2Q9BYW2 2564 aaPredicted RBP-0.25□□□□□ -2.45
CCDC7-208ENST00000537047 C10orf142B7Z368 130 aa-0.25□□□□□ -2.45
CCDC7-208ENST00000537047 CCL3L1P16619 93 aa-0.25□□□□□ -2.45
CCDC7-208ENST00000537047 ATP11AUNQ6ZP68 121 aa-0.25□□□□□ -2.45
CCDC7-208ENST00000537047 TCTE3Q8IZS6 198 aa-0.25□□□□□ -2.45
CCDC7-208ENST00000537047 IFI27L1Q96BM0 104 aa-0.25□□□□□ -2.45
CCDC7-208ENST00000537047 SPANXA1Q9NS26 97 aa-0.25□□□□□ -2.45
CCDC7-208ENST00000537047 ZNF142P52746 1687 aaPredicted RBP-0.25□□□□□ -2.45
CCDC7-208ENST00000537047 PLXNA2O75051 1894 aa-0.25□□□□□ -2.45
CCDC7-208ENST00000537047 UNC79Q9P2D8 2635 aa-0.25□□□□□ -2.45
CCDC7-208ENST00000537047 CELSR2Q9HCU4 2923 aa-0.25□□□□□ -2.45
CCDC7-208ENST00000537047 CELSR1Q9NYQ6 3014 aa-0.25□□□□□ -2.45
CCDC7-208ENST00000537047 ZANQ9Y493 2812 aa-0.26□□□□□ -2.45
CCDC7-208ENST00000537047 A0A087WTM6 91 aa-0.26□□□□□ -2.45
CCDC7-208ENST00000537047 DEGS1O15121 323 aa-0.26□□□□□ -2.45
CCDC7-208ENST00000537047 TNFSF15O95150 251 aa-0.26□□□□□ -2.45
CCDC7-208ENST00000537047 NEFHP12036 1026 aa-0.26□□□□□ -2.45
CCDC7-208ENST00000537047 IFITM1P13164 125 aa-0.26□□□□□ -2.45
CCDC7-208ENST00000537047 FAM74A4Q5TZK3 123 aa-0.26□□□□□ -2.45
CCDC7-208ENST00000537047 C4orf33Q8N1A6 199 aa-0.26□□□□□ -2.45
CCDC7-208ENST00000537047 JMJD1CQ15652 2540 aa-0.26□□□□□ -2.45
CCDC7-208ENST00000537047 CREBBPQ92793 2442 aa-0.26□□□□□ -2.45
CCDC7-208ENST00000537047 XIRP1Q702N8 1843 aaKnown RBP-0.27□□□□□ -2.45
CCDC7-208ENST00000537047 CASZ1Q86V15 1759 aa-0.27□□□□□ -2.45
CCDC7-208ENST00000537047 ASXL3Q9C0F0 2248 aa-0.27□□□□□ -2.45
CCDC7-208ENST00000537047 TRBV7-1A0A0A6YYK4 115 aa-0.27□□□□□ -2.45
CCDC7-208ENST00000537047 J3QLW9 94 aa-0.27□□□□□ -2.45
CCDC7-208ENST00000537047 CMPK1P30085 196 aa-0.27□□□□□ -2.45
CCDC7-208ENST00000537047 SLC48A1Q6P1K1 146 aa-0.27□□□□□ -2.45
CCDC7-208ENST00000537047 COX7B2Q8TF08 81 aa-0.27□□□□□ -2.45
CCDC7-208ENST00000537047 SELENOSQ9BQE4 189 aa-0.27□□□□□ -2.45
CCDC7-208ENST00000537047 HIGD1AQ9Y241 93 aa-0.27□□□□□ -2.45
CCDC7-208ENST00000537047 TENM2Q9NT68 2774 aa-0.27□□□□□ -2.45
CCDC7-208ENST00000537047 KDM5CP41229 1560 aa-0.28□□□□□ -2.45
CCDC7-208ENST00000537047 SRRM2Q9UQ35 2752 aaKnown RBP-0.28□□□□□ -2.45
CCDC7-208ENST00000537047 HECTD1Q9ULT8 2610 aa-0.28□□□□□ -2.45
CCDC7-208ENST00000537047 M0R2P5 195 aa-0.28□□□□□ -2.45
CCDC7-208ENST00000537047 KRTAP20-2Q3LI61 65 aa-0.28□□□□□ -2.45
CCDC7-208ENST00000537047 CLLU1Q5K131 121 aa-0.28□□□□□ -2.45
CCDC7-208ENST00000537047 SCP2D1Q9UJQ7 156 aa-0.28□□□□□ -2.45
CCDC7-208ENST00000537047 V9GYV3 84 aa-0.28□□□□□ -2.45
CCDC7-208ENST00000537047 SSC5DA1L4H1 1573 aa-0.28□□□□□ -2.45
CCDC7-208ENST00000537047 ABCA4P78363 2273 aa-0.29□□□□□ -2.46
CCDC7-208ENST00000537047 COL12A1Q99715 3063 aa-0.29□□□□□ -2.46
CCDC7-208ENST00000537047 MYO7AQ13402 2215 aa-0.29□□□□□ -2.46
CCDC7-208ENST00000537047 DSPP15924 2871 aaKnown RBP-0.29□□□□□ -2.46
CCDC7-208ENST00000537047 KMT2AQ03164 3969 aa-0.29□□□□□ -2.46
CCDC7-208ENST00000537047 DBIP07108 87 aaKnown RBP-0.29□□□□□ -2.46
CCDC7-208ENST00000537047 NBEAP1P0C6P0 100 aa-0.29□□□□□ -2.46
CCDC7-208ENST00000537047 NPC2P61916 151 aa-0.29□□□□□ -2.46
CCDC7-208ENST00000537047 CCDC153Q494R4 210 aa-0.29□□□□□ -2.46
CCDC7-208ENST00000537047 Q6ZRX8 168 aa-0.29□□□□□ -2.46
CCDC7-208ENST00000537047 C20orf197Q8N268 126 aa-0.29□□□□□ -2.46
CCDC7-208ENST00000537047 Q96NJ1 140 aa-0.29□□□□□ -2.46
CCDC7-208ENST00000537047 KIF13AQ9H1H9 1805 aa-0.29□□□□□ -2.46
CCDC7-208ENST00000537047 PTPRMP28827 1452 aa-0.29□□□□□ -2.46
CCDC7-208ENST00000537047 FLNCQ14315 2725 aa-0.3□□□□□ -2.46
CCDC7-208ENST00000537047 GNG14A0A1W2PPG7 69 aa-0.3□□□□□ -2.46
CCDC7-208ENST00000537047 TMEM14DPA8MWL7 114 aa-0.3□□□□□ -2.46
CCDC7-208ENST00000537047 ACYP2P14621 99 aa-0.3□□□□□ -2.46
CCDC7-208ENST00000537047 INSL4Q14641 139 aa-0.3□□□□□ -2.46
CCDC7-208ENST00000537047 SPCS2Q15005 226 aa-0.3□□□□□ -2.46
CCDC7-208ENST00000537047 ARAP1Q96P48 1450 aa-0.3□□□□□ -2.46
CCDC7-208ENST00000537047 UBR5O95071 2799 aaPredicted RBP-0.3□□□□□ -2.46
CCDC7-208ENST00000537047 MED13LQ71F56 2210 aa-0.3□□□□□ -2.46
CCDC7-208ENST00000537047 COL6A5A8TX70 2615 aa-0.31□□□□□ -2.46
CCDC7-208ENST00000537047 PLXNA1Q9UIW2 1896 aa-0.31□□□□□ -2.46
CCDC7-208ENST00000537047 VWFP04275 2813 aa-0.31□□□□□ -2.46
CCDC7-208ENST00000537047 POLQO75417 2590 aa-0.31□□□□□ -2.46
CCDC7-208ENST00000537047 TRAV12-3A0A0B4J271 114 aa-0.31□□□□□ -2.46
CCDC7-208ENST00000537047 GCHFRP30047 84 aa-0.31□□□□□ -2.46
CCDC7-208ENST00000537047 BATF3Q9NR55 127 aa-0.31□□□□□ -2.46
CCDC7-208ENST00000537047 LSM2Q9Y333 95 aaKnown RBP-0.31□□□□□ -2.46
CCDC7-208ENST00000537047 ABCA2Q9BZC7 2435 aa-0.31□□□□□ -2.46
CCDC7-208ENST00000537047 F5P12259 2224 aa-0.32□□□□□ -2.46
CCDC7-208ENST00000537047 FAT2Q9NYQ8 4349 aa-0.32□□□□□ -2.46
CCDC7-208ENST00000537047 CACNA1AO00555 2505 aa-0.32□□□□□ -2.46
CCDC7-208ENST00000537047 TRBV20-1A0A075B6N2 111 aa-0.32□□□□□ -2.46
CCDC7-208ENST00000537047 MT4P47944 62 aa-0.32□□□□□ -2.46
CCDC7-208ENST00000537047 NCS1P62166 190 aa-0.32□□□□□ -2.46
CCDC7-208ENST00000537047 MORN2Q502X0 79 aa-0.32□□□□□ -2.46
CCDC7-208ENST00000537047 MMGT1Q8N4V1 131 aa-0.32□□□□□ -2.46
CCDC7-208ENST00000537047 SAR1AQ9NR31 198 aa-0.32□□□□□ -2.46
CCDC7-208ENST00000537047 CADP27708 2225 aa-0.33□□□□□ -2.46
CCDC7-208ENST00000537047 MYO18BQ8IUG5 2567 aa-0.33□□□□□ -2.46
CCDC7-208ENST00000537047 LPAP08519 4548 aa-0.33□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms