RNA–Protein interactions for RNA: ENST00000533943.1

MRPL49-208, Transcript of mitochondrial ribosomal protein L49, human

TSL 3

Gene MRPL49, Length 688 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL49-208	ENST00000533943	PDE6D	O43924	150 aa		10.91	□□□□□ -0.66
MRPL49-208	ENST00000533943	IFNA1	P01562	189 aa		10.91	□□□□□ -0.66
MRPL49-208	ENST00000533943	RPL19	P84098	196 aa	Known RBP	10.91	□□□□□ -0.66
MRPL49-208	ENST00000533943	MEF2B	Q02080	365 aa	Predicted RBP	10.91	□□□□□ -0.66
MRPL49-208	ENST00000533943	LINC01556	Q5JQF7	62 aa		10.91	□□□□□ -0.66
MRPL49-208	ENST00000533943	OR10J3	Q5JRS4	329 aa		10.91	□□□□□ -0.66
MRPL49-208	ENST00000533943	C14orf178	Q8N769	122 aa	Predicted RBP	10.91	□□□□□ -0.66
MRPL49-208	ENST00000533943	GAGE12J	A6NER3	117 aa		10.9	□□□□□ -0.66
MRPL49-208	ENST00000533943	BCL2	P10415	239 aa		10.9	□□□□□ -0.66
MRPL49-208	ENST00000533943	GAGE1	Q13065	139 aa		10.9	□□□□□ -0.66
MRPL49-208	ENST00000533943	GAGE4	Q13068	117 aa		10.9	□□□□□ -0.66
MRPL49-208	ENST00000533943	GAGE5	Q13069	117 aa		10.9	□□□□□ -0.66
MRPL49-208	ENST00000533943	GAGE13	Q4V321	117 aa		10.9	□□□□□ -0.66
MRPL49-208	ENST00000533943	CENPW	Q5EE01	88 aa		10.9	□□□□□ -0.66
MRPL49-208	ENST00000533943	FAM74A4	Q5TZK3	123 aa		10.9	□□□□□ -0.66
MRPL49-208	ENST00000533943	PRR27	Q6MZM9	219 aa		10.9	□□□□□ -0.66
MRPL49-208	ENST00000533943	SPATA12	Q7Z6I5	190 aa		10.9	□□□□□ -0.66
MRPL49-208	ENST00000533943	SSBP4	Q9BWG4	385 aa	Predicted RBP	10.9	□□□□□ -0.66
MRPL49-208	ENST00000533943		Q9UF83	564 aa		10.9	□□□□□ -0.66
MRPL49-208	ENST00000533943		A0A087WWL8	130 aa		10.89	□□□□□ -0.67
MRPL49-208	ENST00000533943	SNAI2	O43623	268 aa		10.89	□□□□□ -0.67
MRPL49-208	ENST00000533943	OR5AL1	P0C617	328 aa		10.89	□□□□□ -0.67
MRPL49-208	ENST00000533943	TAGLN2	P37802	199 aa	Known RBP	10.89	□□□□□ -0.67
MRPL49-208	ENST00000533943	SMIM12	Q96EX1	92 aa		10.89	□□□□□ -0.67
MRPL49-208	ENST00000533943	HSPG2	P98160	4391 aa		10.89	□□□□□ -0.67
MRPL49-208	ENST00000533943	IGLV2-8	P01709	118 aa		10.88	□□□□□ -0.67
MRPL49-208	ENST00000533943	APOB	P04114	4563 aa	Known RBP	10.88	□□□□□ -0.67
MRPL49-208	ENST00000533943	KRTAP10-2	P60368	255 aa		10.88	□□□□□ -0.67
MRPL49-208	ENST00000533943	OR10AG1	Q8NH19	301 aa		10.88	□□□□□ -0.67
MRPL49-208	ENST00000533943	VAX2	Q9UIW0	290 aa		10.88	□□□□□ -0.67
MRPL49-208	ENST00000533943	TRBV10-1	A0A0K0K1A3	114 aa		10.87	□□□□□ -0.67
MRPL49-208	ENST00000533943	RAB19	A4D1S5	217 aa		10.87	□□□□□ -0.67
MRPL49-208	ENST00000533943	GNG4	P50150	75 aa		10.87	□□□□□ -0.67
MRPL49-208	ENST00000533943	ERVFC1-1	P60608	527 aa		10.87	□□□□□ -0.67
MRPL49-208	ENST00000533943	MED9	Q9NWA0	146 aa		10.87	□□□□□ -0.67
MRPL49-208	ENST00000533943		A0A087WWC5	75 aa		10.86	□□□□□ -0.67
MRPL49-208	ENST00000533943	IBA57-AS1	B1ANH7	110 aa		10.86	□□□□□ -0.67
MRPL49-208	ENST00000533943	EREG	O14944	169 aa		10.86	□□□□□ -0.67
MRPL49-208	ENST00000533943	DAZAP1	Q96EP5	407 aa	Known RBP	10.86	□□□□□ -0.67
MRPL49-208	ENST00000533943	C19orf71	A6NCJ1	209 aa		10.85	□□□□□ -0.67
MRPL49-208	ENST00000533943	RAB4B	P61018	213 aa		10.85	□□□□□ -0.67
MRPL49-208	ENST00000533943	SPANXN1	Q5VSR9	72 aa		10.85	□□□□□ -0.67
MRPL49-208	ENST00000533943	BIN3	Q9NQY0	253 aa		10.85	□□□□□ -0.67
MRPL49-208	ENST00000533943	TRBV20OR9-2	A0A075B6H5	130 aa		10.84	□□□□□ -0.67
MRPL49-208	ENST00000533943		A0A087WTM6	91 aa		10.84	□□□□□ -0.67
MRPL49-208	ENST00000533943	CDK2AP2	O75956	126 aa		10.84	□□□□□ -0.67
MRPL49-208	ENST00000533943	IGHV3-30	P01768	117 aa		10.84	□□□□□ -0.67
MRPL49-208	ENST00000533943	IGHV3-33	P01772	117 aa		10.84	□□□□□ -0.67
MRPL49-208	ENST00000533943	IGHV3-30-3	P0DP02	117 aa		10.84	□□□□□ -0.67
MRPL49-208	ENST00000533943	IGHV3-30-5	P0DP03	117 aa		10.84	□□□□□ -0.67
MRPL49-208	ENST00000533943	RPS20	P60866	119 aa	Known RBP	10.84	□□□□□ -0.67
MRPL49-208	ENST00000533943	BLOC1S1	P78537	153 aa		10.84	□□□□□ -0.67
MRPL49-208	ENST00000533943	OR2D3	Q8NGH3	330 aa		10.84	□□□□□ -0.67
MRPL49-208	ENST00000533943	PGPEP1	Q9NXJ5	209 aa		10.84	□□□□□ -0.67
MRPL49-208	ENST00000533943	MUC21	A0A0G2JKD1	596 aa		10.83	□□□□□ -0.68
MRPL49-208	ENST00000533943	MUC21	A0A140T8X8	626 aa		10.83	□□□□□ -0.68
MRPL49-208	ENST00000533943	RPL36A	P83881	106 aa	Known RBP	10.83	□□□□□ -0.68
MRPL49-208	ENST00000533943	ALKAL2	Q6UX46	152 aa		10.83	□□□□□ -0.68
MRPL49-208	ENST00000533943	OR10G8	Q8NGN5	311 aa		10.83	□□□□□ -0.68
MRPL49-208	ENST00000533943	RPL36AL	Q969Q0	106 aa	Known RBP	10.83	□□□□□ -0.68
MRPL49-208	ENST00000533943	TRBV7-3	A0A075B6L6	115 aa		10.82	□□□□□ -0.68
MRPL49-208	ENST00000533943		P01737	135 aa		10.82	□□□□□ -0.68
MRPL49-208	ENST00000533943	IGLC6	P0CF74	106 aa		10.82	□□□□□ -0.68
MRPL49-208	ENST00000533943	UBE2D3	P61077	147 aa		10.82	□□□□□ -0.68
MRPL49-208	ENST00000533943	UBE2D2	P62837	147 aa		10.82	□□□□□ -0.68
MRPL49-208	ENST00000533943	LAGE3	Q14657	143 aa		10.82	□□□□□ -0.68
MRPL49-208	ENST00000533943	LYPD6B	Q8NI32	183 aa		10.82	□□□□□ -0.68
MRPL49-208	ENST00000533943		A0A1B0GVG6	124 aa		10.81	□□□□□ -0.68
MRPL49-208	ENST00000533943	XKRY2	A2RUG3	117 aa		10.81	□□□□□ -0.68
MRPL49-208	ENST00000533943	GZMB	P10144	247 aa		10.81	□□□□□ -0.68
MRPL49-208	ENST00000533943	ZNF56	Q15929	161 aa		10.81	□□□□□ -0.68
MRPL49-208	ENST00000533943	CDPF1	Q6NVV7	123 aa		10.81	□□□□□ -0.68
MRPL49-208	ENST00000533943	FER1L6-AS1	Q8NA97	138 aa		10.81	□□□□□ -0.68
MRPL49-208	ENST00000533943	SST	P61278	116 aa		10.8	□□□□□ -0.68
MRPL49-208	ENST00000533943		Q8N3U1	123 aa		10.8	□□□□□ -0.68
MRPL49-208	ENST00000533943	AP1S3	Q96PC3	154 aa		10.8	□□□□□ -0.68
MRPL49-208	ENST00000533943	KIF25-AS1	Q9Y6Z4	181 aa		10.8	□□□□□ -0.68
MRPL49-208	ENST00000533943	RBFOX3	A6NFN3	312 aa		10.79	□□□□□ -0.68
MRPL49-208	ENST00000533943		F2Z2F3	143 aa		10.79	□□□□□ -0.68
MRPL49-208	ENST00000533943	TMEM250	H0YL14	139 aa		10.79	□□□□□ -0.68
MRPL49-208	ENST00000533943	PSCA	O43653	123 aa		10.79	□□□□□ -0.68
MRPL49-208	ENST00000533943	SMIM17	P0DL12	118 aa		10.79	□□□□□ -0.68
MRPL49-208	ENST00000533943	NKX2-5	P52952	324 aa	Predicted RBP	10.79	□□□□□ -0.68
MRPL49-208	ENST00000533943	CACNG7	P62955	275 aa		10.79	□□□□□ -0.68
MRPL49-208	ENST00000533943	NEXN-AS1	Q8NBZ9	246 aa		10.79	□□□□□ -0.68
MRPL49-208	ENST00000533943	TPPP3	Q9BW30	176 aa		10.79	□□□□□ -0.68
MRPL49-208	ENST00000533943		Q9HAA7	133 aa		10.79	□□□□□ -0.68
MRPL49-208	ENST00000533943		F5H697	171 aa		10.78	□□□□□ -0.68
MRPL49-208	ENST00000533943	TOR2A	Q5JU69	321 aa		10.78	□□□□□ -0.68
MRPL49-208	ENST00000533943	DAZ4	Q86SG3	579 aa	Known RBP	10.78	□□□□□ -0.68
MRPL49-208	ENST00000533943	NIT1	Q86X76	327 aa		10.78	□□□□□ -0.68
MRPL49-208	ENST00000533943	NUDT10	Q8NFP7	164 aa		10.78	□□□□□ -0.68
MRPL49-208	ENST00000533943	NUDT11	Q96G61	164 aa		10.78	□□□□□ -0.68
MRPL49-208	ENST00000533943	DAZ3	Q9NR90	486 aa	Known RBP	10.78	□□□□□ -0.68
MRPL49-208	ENST00000533943	PCLO	Q9Y6V0	5065 aa		10.78	□□□□□ -0.68
MRPL49-208	ENST00000533943	TRAV8-3	A0A0A6YYJ7	113 aa		10.77	□□□□□ -0.69
MRPL49-208	ENST00000533943	LRCOL1	A6NCL2	159 aa		10.77	□□□□□ -0.69
MRPL49-208	ENST00000533943	OCC1	Q8TAD7	63 aa		10.77	□□□□□ -0.69
MRPL49-208	ENST00000533943	TM2D2	Q9BX73	214 aa		10.77	□□□□□ -0.69
MRPL49-208	ENST00000533943	URGCP-MRPS24	S4R325	110 aa		10.77	□□□□□ -0.69

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